Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1613
(774 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127647-1|ABL74413.1| 213|Anopheles gambiae Rab5 protein. 79 2e-16
AJ438610-3|CAD27475.1| 190|Anopheles gambiae putative RHO small... 38 5e-04
Z69980-1|CAA93820.1| 134|Anopheles gambiae GTP-binding protein ... 32 0.023
EU068741-1|ABU40241.1| 993|Anopheles gambiae anion exchanger pr... 26 1.5
M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles ... 24 6.0
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 24 6.0
AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic acetylch... 24 6.0
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 23 7.9
AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. 23 7.9
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 23 7.9
>EF127647-1|ABL74413.1| 213|Anopheles gambiae Rab5 protein.
Length = 213
Score = 79.0 bits (186), Expect = 2e-16
Identities = 38/84 (45%), Positives = 53/84 (63%), Gaps = 3/84 (3%)
Frame = +2
Query: 254 LGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYY 433
+GKSSL+ RF + +F+ +STIG F T+++ +D T+K +IWDTAGQERY ++ YY
Sbjct: 35 VGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQERYHSLAPMYY 94
Query: 434 RGAWARCW---FTTSPSTCRTRTW 496
RGA A S S R +TW
Sbjct: 95 RGAQAAIVVYDIQNSDSFARAKTW 118
Score = 65.7 bits (153), Expect = 2e-12
Identities = 34/86 (39%), Positives = 49/86 (56%)
Frame = +1
Query: 448 ALLVYDIAKHLSYENVERWLPSCAIHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEAN 627
A++VYDI S+ + W+ A NI+I L GNK+DL + R + EEAK +A+ N
Sbjct: 100 AIVVYDIQNSDSFARAKTWVKELQRQASPNIVIALAGNKADLANSRVVDYEEAKQYADDN 159
Query: 628 GLSFIETSALDSTNVEPAFQNILTEI 705
L F+ETSA + NV F I ++
Sbjct: 160 RLLFMETSAKTAVNVNDIFLAIAKKL 185
>AJ438610-3|CAD27475.1| 190|Anopheles gambiae putative RHO small
GTPase protein.
Length = 190
Score = 37.5 bits (83), Expect = 5e-04
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +2
Query: 254 LGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRAITSAYY 433
+GK+ +L +T + F E T ++ + VDG + +WDTAGQE Y + Y
Sbjct: 17 VGKTCMLISYTTDSFPGEYVPTSFDNYSAPMV-VDGVQVSLGLWDTAGQEDYDRLRPLSY 75
Query: 434 --RGAWARCWFTTSPST 478
+ C+ SPS+
Sbjct: 76 PQTDVFLICYSVASPSS 92
>Z69980-1|CAA93820.1| 134|Anopheles gambiae GTP-binding protein
protein.
Length = 134
Score = 31.9 bits (69), Expect = 0.023
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 451 LLVYDIAKHLSYENV-ERWLPSCAIHADQNILIMLVGNKSDLRHLRSIPTEEAK 609
L+ + + S+ENV E+W+P H Q +LVG + DLR S + AK
Sbjct: 22 LVCFSVVSPSSFENVKEKWVPEITHHC-QKTPFLLVGTQIDLRDENSTLEKLAK 74
>EU068741-1|ABU40241.1| 993|Anopheles gambiae anion exchanger
protein.
Length = 993
Score = 25.8 bits (54), Expect = 1.5
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -1
Query: 372 FMVLPSTSILLVANSTPMVDLDSKLNSFLVKRD 274
F +L +L++ + P+V D LN F + D
Sbjct: 493 FHLLAGQPLLIIGTTGPLVLFDEALNQFCISND 525
>M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 574
Score = 23.8 bits (49), Expect = 6.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 373 SSDMGHGRPGAVPRHHVGVLPRRVGA 450
++ +G G+P A PR LPRR A
Sbjct: 189 AAKVGGGQPSASPRQPPTPLPRRSSA 214
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 23.8 bits (49), Expect = 6.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -1
Query: 636 TKSVGFRERFRLLRRDGPKMPEI 568
TK + F++RF + D +MPE+
Sbjct: 138 TKWLTFKDRFSSMVHDSTEMPEV 160
>AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 1 protein.
Length = 557
Score = 23.8 bits (49), Expect = 6.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 41 NHN*KVMLKEPCIVL*ICDICVQYY 115
+H KV+ K P I C+I V+Y+
Sbjct: 131 HHTGKVVWKPPAIYKSFCEIDVEYF 155
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.4 bits (48), Expect = 7.9
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +2
Query: 461 TTSPSTCRTRTWSD 502
TT+P++ T TWSD
Sbjct: 196 TTTPASTTTTTWSD 209
>AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 23.4 bits (48), Expect = 7.9
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +2
Query: 461 TTSPSTCRTRTWSD 502
TT+P++ T TWSD
Sbjct: 195 TTTPASTTTTTWSD 208
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 23.4 bits (48), Expect = 7.9
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +2
Query: 461 TTSPSTCRTRTWSD 502
TT+P++ T TWSD
Sbjct: 195 TTTPASTTTTTWSD 208
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 740,622
Number of Sequences: 2352
Number of extensions: 14797
Number of successful extensions: 31
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80665782
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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