BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1609 (838 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q4XWR2 Cluster: Putative uncharacterized protein; n=2; ... 35 2.2 UniRef50_Q38BZ9 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7 UniRef50_Q8IBZ0 Cluster: Putative uncharacterized protein MAL7P1... 33 8.9 UniRef50_Q8SSE5 Cluster: DNA REPLICATION LICENSING FACTOR OF THE... 33 8.9 >UniRef50_Q4XWR2 Cluster: Putative uncharacterized protein; n=2; Plasmodium (Vinckeia)|Rep: Putative uncharacterized protein - Plasmodium chabaudi Length = 135 Score = 35.1 bits (77), Expect = 2.2 Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 7/111 (6%) Frame = +3 Query: 360 FYLLLPFHISLINVIKY*YALTQLLENSYTSSAN-ASLDFMNIASFISSKVNLIEVHSTL 536 F+ F++SL Y ++++ENS + + + + MN+ +S + N + L Sbjct: 7 FFFFFFFNVSLFVCRTAKYEDSEIIENSTVKNNDITNKNIMNVLKSVSLEENKKTEKNIL 66 Query: 537 HTFRFYCRIPNVFKNDSD*QITYI------SKKKKPRKFVEVNTNYKLRKK 671 + +Y + + Q+ Y + KKKP+ +VN Y RKK Sbjct: 67 YDLSYYMNFLKILSGINSQQMEYEGIINIDNTKKKPKNIKDVNIIYSSRKK 117 >UniRef50_Q38BZ9 Cluster: Putative uncharacterized protein; n=1; Trypanosoma brucei|Rep: Putative uncharacterized protein - Trypanosoma brucei Length = 717 Score = 33.5 bits (73), Expect = 6.7 Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 4/79 (5%) Frame = +3 Query: 354 FRFYLLLPFHISLINVIKY*YALT-QLLENSYTSSANASLDFMNIASFISSKVNLIEVHS 530 F F+L L F + I V+ + Y +T LL+N + + L ++ + + S +N I Sbjct: 415 FEFFLQLAFGV--IYVLSHLYHMTPNLLDNIFMKKCSIPLSYIKLPTRRLSYLNFICTEF 472 Query: 531 TL---HTFRFYCRIPNVFK 578 L F F CR+P+V++ Sbjct: 473 GLLLDDLFAFSCRVPSVYR 491 >UniRef50_Q8IBZ0 Cluster: Putative uncharacterized protein MAL7P1.30; n=2; Plasmodium|Rep: Putative uncharacterized protein MAL7P1.30 - Plasmodium falciparum (isolate 3D7) Length = 3267 Score = 33.1 bits (72), Expect = 8.9 Identities = 18/32 (56%), Positives = 19/32 (59%) Frame = +1 Query: 730 KIYDDNNNNKFYGSCAKTKVINYFLYRKSRYI 825 KI DDNNNN Y TKVIN FL K Y+ Sbjct: 1877 KIGDDNNNNNIY--IIITKVINNFLCIKESYV 1906 >UniRef50_Q8SSE5 Cluster: DNA REPLICATION LICENSING FACTOR OF THE MCM FAMILY; n=1; Encephalitozoon cuniculi|Rep: DNA REPLICATION LICENSING FACTOR OF THE MCM FAMILY - Encephalitozoon cuniculi Length = 708 Score = 33.1 bits (72), Expect = 8.9 Identities = 20/44 (45%), Positives = 29/44 (65%) Frame = -1 Query: 199 RKVLRSNRQPGDDSAILIYGILGLLKSTLLSFHYQEKEQGVFFS 68 RK L S+R GD + IL+ G G+ KS LLSF ++ E+G++ S Sbjct: 348 RKELGSSRLRGDIN-ILLAGDPGISKSQLLSFIHRTSERGMYTS 390 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 683,391,399 Number of Sequences: 1657284 Number of extensions: 12772777 Number of successful extensions: 27292 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 25999 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 27261 length of database: 575,637,011 effective HSP length: 100 effective length of database: 409,908,611 effective search space used: 72963732758 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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