Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1609
         (838 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73425-7|CAA97790.1| 1059|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z67990-6|CAA91937.1|  199|Caenorhabditis elegans Hypothetical pr...    28   9.5  

>Z73425-7|CAA97790.1| 1059|Caenorhabditis elegans Hypothetical
           protein F12F6.5 protein.
          Length = 1059

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +1

Query: 730 KIYDDNNNNKFYGSCAKTKVINYFLYRKSRYIVI 831
           K Y+D+N  K+ GS     ++ YF  R+ ++ V+
Sbjct: 221 KRYEDSNPGKYEGSRRHRSLVKYFKRREEKFEVV 254


>Z67990-6|CAA91937.1|  199|Caenorhabditis elegans Hypothetical
           protein F02D10.6 protein.
          Length = 199

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = +3

Query: 306 YELIHL*VGRYDILTLFRFYLLLPFHISLINVIKY*YAL 422
           + L+H+    Y + TL   Y+++PFHISL  + ++ Y +
Sbjct: 76  FRLLHMCYNVYILYTLG--YMIVPFHISLYFLFEFTYTV 112


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,345,520
Number of Sequences: 27780
Number of extensions: 322465
Number of successful extensions: 687
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)