Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1608
         (840 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    23   3.0  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   3.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   7.0  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   9.2  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    21   9.2  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    21   9.2  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    21   9.2  

>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 770 CSRRQISIDVFPIGWD 817
           C RRQ+ +D   +GW+
Sbjct: 271 CRRRQMYVDFGSVGWN 286


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +2

Query: 707 TKLGTNLLKHFKASSKTRVKV 769
           TK+  NLLKH+++++    K+
Sbjct: 124 TKIEINLLKHYQSTTDLHKKI 144


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -1

Query: 426 PPICSEIFI*SEPLTNPTSTFDFTSS-RMNLLNSS 325
           PP+ S+I      +T+P++T   TSS   N  NSS
Sbjct: 410 PPMQSQIINPQPQITSPSNTNTSTSSTNSNKPNSS 444


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -3

Query: 736  VLQQIGA*LCVLNHTQKTDLALFDYMIFQQGKY*AYLIGI 617
            V Q I A LCV+   Q+ D     Y+IF    Y A ++ I
Sbjct: 887  VTQTIFA-LCVVLQLQENDWLQLGYLIFVSTLYTANVVCI 925


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -3

Query: 325 CNFLARFCQRSVNIEQIQNFLL 260
           CNF  +FC R     Q  N LL
Sbjct: 542 CNFYRKFCARYSAATQDLNKLL 563


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +2

Query: 587 NYQSREVISLNSDQVCLIFALL 652
           NY+S + IS  +  VC++ A++
Sbjct: 2   NYRSSKSISTQAVWVCMVLAVV 23


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +2

Query: 587 NYQSREVISLNSDQVCLIFALL 652
           NY+S + IS  +  VC++ A++
Sbjct: 2   NYRSSKSISTQAVWVCMVLAVV 23


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +2

Query: 587 NYQSREVISLNSDQVCLIFALL 652
           NY+S + IS  +  VC++ A++
Sbjct: 2   NYRSSKSISTQAVWVCMVLAVV 23


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,715
Number of Sequences: 336
Number of extensions: 4383
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23140487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)