Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1608
(840 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U86070-1|AAC00023.1| 262|Homo sapiens phosphomannomutase protein. 108 2e-23
D87810-1|BAA13460.1| 262|Homo sapiens phosphomannomutase protein. 108 2e-23
CR456544-1|CAG30430.1| 262|Homo sapiens PMM1 protein. 108 2e-23
BC016818-1|AAH16818.1| 262|Homo sapiens phosphomannomutase 1 pr... 108 2e-23
BC010855-1|AAH10855.1| 262|Homo sapiens phosphomannomutase 1 pr... 108 2e-23
AL023553-6|CAB46025.1| 262|Homo sapiens phosphomannomutase 1 pr... 108 2e-23
U62526-1|AAC51117.1| 262|Homo sapiens phosphomannomutase protein. 106 1e-22
U85773-1|AAC51368.1| 246|Homo sapiens phopshomannomutase protein. 98 3e-20
BC008310-1|AAH08310.1| 246|Homo sapiens phosphomannomutase 2 pr... 98 3e-20
AF157796-1|AAD45895.1| 246|Homo sapiens phosphomannomutase 2 pr... 98 3e-20
AB209659-1|BAD92896.1| 165|Homo sapiens phosphomannomutase 2 va... 66 1e-10
X98494-1|CAA67120.1| 672|Homo sapiens M phase phosphoprotein 10... 31 5.2
BC126389-1|AAI26390.1| 681|Homo sapiens M-phase phosphoprotein ... 31 5.2
>U86070-1|AAC00023.1| 262|Homo sapiens phosphomannomutase protein.
Length = 262
Score = 108 bits (260), Expect = 2e-23
Identities = 48/85 (56%), Positives = 65/85 (76%)
Frame = +1
Query: 508 KSIVNHLGEQKLQEVINFAMGYMSNIKLPVKRGNFIEFRSSMLNICPVGRSCNQIERDQF 687
++I NHLGE+ LQ++INF + YM+ ++LP KRG FIEFR+ MLNI P+GRSC ER +F
Sbjct: 94 QTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEF 153
Query: 688 SEYDSKHKVRHQFVEALQSKFKDSG 762
SE D K K+R +FVEAL+++F G
Sbjct: 154 SELDKKEKIREKFVEALKTEFAGKG 178
Score = 94.3 bits (224), Expect = 5e-19
Identities = 45/85 (52%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Frame = +2
Query: 260 QKKVLYLFDVDGTLTKPRQKITEEFRRFILDEVKSKVDVGLVSGSDYMKISEQMG-GEDV 436
+++VL LFDVDGTLT RQKI E F L +++S+V +G+V GSDY KI+EQ+G G++V
Sbjct: 11 KERVLCLFDVDGTLTPARQKIDPEVAAF-LQKLRSRVQIGVVGGSDYCKIAEQLGDGDEV 69
Query: 437 VSNFNYVFSENGLVHHKNGKKLSSR 511
+ F+YVF+ENG V +K+G+ LS +
Sbjct: 70 IEKFDYVFAENGTVQYKHGRLLSKQ 94
Score = 34.7 bits (76), Expect = 0.42
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 785 ISIDVFPIGWDKTYCLN 835
IS DVFP GWDK YCL+
Sbjct: 187 ISFDVFPEGWDKRYCLD 203
>D87810-1|BAA13460.1| 262|Homo sapiens phosphomannomutase protein.
Length = 262
Score = 108 bits (260), Expect = 2e-23
Identities = 48/85 (56%), Positives = 65/85 (76%)
Frame = +1
Query: 508 KSIVNHLGEQKLQEVINFAMGYMSNIKLPVKRGNFIEFRSSMLNICPVGRSCNQIERDQF 687
++I NHLGE+ LQ++INF + YM+ ++LP KRG FIEFR+ MLNI P+GRSC ER +F
Sbjct: 94 QTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEF 153
Query: 688 SEYDSKHKVRHQFVEALQSKFKDSG 762
SE D K K+R +FVEAL+++F G
Sbjct: 154 SELDKKEKIREKFVEALKTEFAGKG 178
Score = 94.3 bits (224), Expect = 5e-19
Identities = 45/85 (52%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Frame = +2
Query: 260 QKKVLYLFDVDGTLTKPRQKITEEFRRFILDEVKSKVDVGLVSGSDYMKISEQMG-GEDV 436
+++VL LFDVDGTLT RQKI E F L +++S+V +G+V GSDY KI+EQ+G G++V
Sbjct: 11 KERVLCLFDVDGTLTPARQKIDPEVAAF-LQKLRSRVQIGVVGGSDYCKIAEQLGDGDEV 69
Query: 437 VSNFNYVFSENGLVHHKNGKKLSSR 511
+ F+YVF+ENG V +K+G+ LS +
Sbjct: 70 IEKFDYVFAENGTVQYKHGRLLSKQ 94
Score = 34.7 bits (76), Expect = 0.42
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 785 ISIDVFPIGWDKTYCLN 835
IS DVFP GWDK YCL+
Sbjct: 187 ISFDVFPEGWDKRYCLD 203
>CR456544-1|CAG30430.1| 262|Homo sapiens PMM1 protein.
Length = 262
Score = 108 bits (260), Expect = 2e-23
Identities = 48/85 (56%), Positives = 65/85 (76%)
Frame = +1
Query: 508 KSIVNHLGEQKLQEVINFAMGYMSNIKLPVKRGNFIEFRSSMLNICPVGRSCNQIERDQF 687
++I NHLGE+ LQ++INF + YM+ ++LP KRG FIEFR+ MLNI P+GRSC ER +F
Sbjct: 94 QTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEF 153
Query: 688 SEYDSKHKVRHQFVEALQSKFKDSG 762
SE D K K+R +FVEAL+++F G
Sbjct: 154 SELDKKEKIREKFVEALKTEFAGKG 178
Score = 94.3 bits (224), Expect = 5e-19
Identities = 45/85 (52%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Frame = +2
Query: 260 QKKVLYLFDVDGTLTKPRQKITEEFRRFILDEVKSKVDVGLVSGSDYMKISEQMG-GEDV 436
+++VL LFDVDGTLT RQKI E F L +++S+V +G+V GSDY KI+EQ+G G++V
Sbjct: 11 KERVLCLFDVDGTLTPARQKIDPEVAAF-LQKLRSRVQIGVVGGSDYCKIAEQLGDGDEV 69
Query: 437 VSNFNYVFSENGLVHHKNGKKLSSR 511
+ F+YVF+ENG V +K+G+ LS +
Sbjct: 70 IEKFDYVFAENGTVQYKHGRLLSKQ 94
Score = 34.7 bits (76), Expect = 0.42
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 785 ISIDVFPIGWDKTYCLN 835
IS DVFP GWDK YCL+
Sbjct: 187 ISFDVFPEGWDKRYCLD 203
>BC016818-1|AAH16818.1| 262|Homo sapiens phosphomannomutase 1
protein.
Length = 262
Score = 108 bits (260), Expect = 2e-23
Identities = 48/85 (56%), Positives = 65/85 (76%)
Frame = +1
Query: 508 KSIVNHLGEQKLQEVINFAMGYMSNIKLPVKRGNFIEFRSSMLNICPVGRSCNQIERDQF 687
++I NHLGE+ LQ++INF + YM+ ++LP KRG FIEFR+ MLNI P+GRSC ER +F
Sbjct: 94 QTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEF 153
Query: 688 SEYDSKHKVRHQFVEALQSKFKDSG 762
SE D K K+R +FVEAL+++F G
Sbjct: 154 SELDKKEKIREKFVEALKTEFAGKG 178
Score = 94.3 bits (224), Expect = 5e-19
Identities = 45/85 (52%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Frame = +2
Query: 260 QKKVLYLFDVDGTLTKPRQKITEEFRRFILDEVKSKVDVGLVSGSDYMKISEQMG-GEDV 436
+++VL LFDVDGTLT RQKI E F L +++S+V +G+V GSDY KI+EQ+G G++V
Sbjct: 11 KERVLCLFDVDGTLTPARQKIDPEVAAF-LQKLRSRVQIGVVGGSDYCKIAEQLGDGDEV 69
Query: 437 VSNFNYVFSENGLVHHKNGKKLSSR 511
+ F+YVF+ENG V +K+G+ LS +
Sbjct: 70 IEKFDYVFAENGTVQYKHGRLLSKQ 94
Score = 34.7 bits (76), Expect = 0.42
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 785 ISIDVFPIGWDKTYCLN 835
IS DVFP GWDK YCL+
Sbjct: 187 ISFDVFPEGWDKRYCLD 203
>BC010855-1|AAH10855.1| 262|Homo sapiens phosphomannomutase 1
protein.
Length = 262
Score = 108 bits (260), Expect = 2e-23
Identities = 48/85 (56%), Positives = 65/85 (76%)
Frame = +1
Query: 508 KSIVNHLGEQKLQEVINFAMGYMSNIKLPVKRGNFIEFRSSMLNICPVGRSCNQIERDQF 687
++I NHLGE+ LQ++INF + YM+ ++LP KRG FIEFR+ MLNI P+GRSC ER +F
Sbjct: 94 QTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEF 153
Query: 688 SEYDSKHKVRHQFVEALQSKFKDSG 762
SE D K K+R +FVEAL+++F G
Sbjct: 154 SELDKKEKIREKFVEALKTEFAGKG 178
Score = 94.3 bits (224), Expect = 5e-19
Identities = 45/85 (52%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Frame = +2
Query: 260 QKKVLYLFDVDGTLTKPRQKITEEFRRFILDEVKSKVDVGLVSGSDYMKISEQMG-GEDV 436
+++VL LFDVDGTLT RQKI E F L +++S+V +G+V GSDY KI+EQ+G G++V
Sbjct: 11 KERVLCLFDVDGTLTPARQKIDPEVAAF-LQKLRSRVQIGVVGGSDYCKIAEQLGDGDEV 69
Query: 437 VSNFNYVFSENGLVHHKNGKKLSSR 511
+ F+YVF+ENG V +K+G+ LS +
Sbjct: 70 IEKFDYVFAENGTVQYKHGRLLSKQ 94
Score = 34.7 bits (76), Expect = 0.42
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 785 ISIDVFPIGWDKTYCLN 835
IS DVFP GWDK YCL+
Sbjct: 187 ISFDVFPEGWDKRYCLD 203
>AL023553-6|CAB46025.1| 262|Homo sapiens phosphomannomutase 1
protein.
Length = 262
Score = 108 bits (260), Expect = 2e-23
Identities = 48/85 (56%), Positives = 65/85 (76%)
Frame = +1
Query: 508 KSIVNHLGEQKLQEVINFAMGYMSNIKLPVKRGNFIEFRSSMLNICPVGRSCNQIERDQF 687
++I NHLGE+ LQ++INF + YM+ ++LP KRG FIEFR+ MLNI P+GRSC ER +F
Sbjct: 94 QTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEF 153
Query: 688 SEYDSKHKVRHQFVEALQSKFKDSG 762
SE D K K+R +FVEAL+++F G
Sbjct: 154 SELDKKEKIREKFVEALKTEFAGKG 178
Score = 94.3 bits (224), Expect = 5e-19
Identities = 45/85 (52%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Frame = +2
Query: 260 QKKVLYLFDVDGTLTKPRQKITEEFRRFILDEVKSKVDVGLVSGSDYMKISEQMG-GEDV 436
+++VL LFDVDGTLT RQKI E F L +++S+V +G+V GSDY KI+EQ+G G++V
Sbjct: 11 KERVLCLFDVDGTLTPARQKIDPEVAAF-LQKLRSRVQIGVVGGSDYCKIAEQLGDGDEV 69
Query: 437 VSNFNYVFSENGLVHHKNGKKLSSR 511
+ F+YVF+ENG V +K+G+ LS +
Sbjct: 70 IEKFDYVFAENGTVQYKHGRLLSKQ 94
Score = 34.7 bits (76), Expect = 0.42
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 785 ISIDVFPIGWDKTYCLN 835
IS DVFP GWDK YCL+
Sbjct: 187 ISFDVFPEGWDKRYCLD 203
>U62526-1|AAC51117.1| 262|Homo sapiens phosphomannomutase protein.
Length = 262
Score = 106 bits (254), Expect = 1e-22
Identities = 47/85 (55%), Positives = 64/85 (75%)
Frame = +1
Query: 508 KSIVNHLGEQKLQEVINFAMGYMSNIKLPVKRGNFIEFRSSMLNICPVGRSCNQIERDQF 687
++I NHLGE+ LQ++INF + YM+ ++LP KRG FIEFR+ MLNI P+GRSC ER +F
Sbjct: 94 QTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEF 153
Query: 688 SEYDSKHKVRHQFVEALQSKFKDSG 762
SE D K K+R +FVE L+++F G
Sbjct: 154 SELDKKEKIREKFVEDLKTEFAGKG 178
Score = 96.3 bits (229), Expect = 1e-19
Identities = 65/195 (33%), Positives = 103/195 (52%), Gaps = 3/195 (1%)
Frame = +2
Query: 260 QKKVLYLFDVDGTLTKPRQKITEEFRRFILDEVKSKVDVGLVSGSDYMKISEQMG-GEDV 436
+++VL LFDVDGTLT RQKI E F L +++S+V +G+V GSDY KI+EQ+G G++V
Sbjct: 11 RERVLCLFDVDGTLTPARQKIDPEVAAF-LQKLRSRVQIGVVGGSDYCKIAEQLGDGDEV 69
Query: 437 VSNFNYVFSENGLVHHKNGKKLSSRA*LTIWVNKNCKR**TSPWVT-CPTSNYQSREVIS 613
+ F+YVF+ENG V +K+G +L S+ + + + + + ++ +
Sbjct: 70 IEKFDYVFAENGTVQYKHG-RLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTF 128
Query: 614 LNSDQVCLIFALLEDHVIK*SEISFLSMIQNTKLGTNLLKHFKASSKTRVKVCSRR-QIS 790
+ L + + I F + + K+ ++ K + SR IS
Sbjct: 129 IEFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEDLKTEFAGKGLRFSRGGMIS 188
Query: 791 IDVFPIGWDKTYCLN 835
DVFP GWDK YCL+
Sbjct: 189 FDVFPEGWDKRYCLD 203
>U85773-1|AAC51368.1| 246|Homo sapiens phopshomannomutase protein.
Length = 246
Score = 98.3 bits (234), Expect = 3e-20
Identities = 42/85 (49%), Positives = 61/85 (71%)
Frame = +1
Query: 508 KSIVNHLGEQKLQEVINFAMGYMSNIKLPVKRGNFIEFRSSMLNICPVGRSCNQIERDQF 687
++I +HLGE +Q++IN+ + Y++ IKLP KRG FIEFR+ MLN+ P+GRSC+Q ER +F
Sbjct: 85 QNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEF 144
Query: 688 SEYDSKHKVRHQFVEALQSKFKDSG 762
E D K +R +FV L+ +F G
Sbjct: 145 YELDKKENIRQKFVADLRKEFAGKG 169
Score = 90.6 bits (215), Expect = 6e-18
Identities = 45/83 (54%), Positives = 60/83 (72%)
Frame = +2
Query: 254 ASQKKVLYLFDVDGTLTKPRQKITEEFRRFILDEVKSKVDVGLVSGSDYMKISEQMGGED 433
A+ L LFDVDGTLT PRQKIT+E F L +++ K+ +G+V GSD+ K+ EQ+ G D
Sbjct: 2 AAPGPALCLFDVDGTLTAPRQKITKEMDDF-LQKLRQKIKIGVVGGSDFEKVQEQL-GND 59
Query: 434 VVSNFNYVFSENGLVHHKNGKKL 502
VV ++YVF ENGLV +K+GK L
Sbjct: 60 VVEKYDYVFPENGLVAYKDGKLL 82
Score = 39.5 bits (88), Expect = 0.015
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = +2
Query: 782 QISIDVFPIGWDKTYCLNH 838
QIS DVFP GWDK YCL H
Sbjct: 177 QISFDVFPDGWDKRYCLRH 195
>BC008310-1|AAH08310.1| 246|Homo sapiens phosphomannomutase 2
protein.
Length = 246
Score = 98.3 bits (234), Expect = 3e-20
Identities = 42/85 (49%), Positives = 61/85 (71%)
Frame = +1
Query: 508 KSIVNHLGEQKLQEVINFAMGYMSNIKLPVKRGNFIEFRSSMLNICPVGRSCNQIERDQF 687
++I +HLGE +Q++IN+ + Y++ IKLP KRG FIEFR+ MLN+ P+GRSC+Q ER +F
Sbjct: 85 QNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEF 144
Query: 688 SEYDSKHKVRHQFVEALQSKFKDSG 762
E D K +R +FV L+ +F G
Sbjct: 145 YELDKKENIRQKFVADLRKEFAGKG 169
Score = 90.6 bits (215), Expect = 6e-18
Identities = 45/83 (54%), Positives = 60/83 (72%)
Frame = +2
Query: 254 ASQKKVLYLFDVDGTLTKPRQKITEEFRRFILDEVKSKVDVGLVSGSDYMKISEQMGGED 433
A+ L LFDVDGTLT PRQKIT+E F L +++ K+ +G+V GSD+ K+ EQ+ G D
Sbjct: 2 AAPGPALCLFDVDGTLTAPRQKITKEMDDF-LQKLRQKIKIGVVGGSDFEKVQEQL-GND 59
Query: 434 VVSNFNYVFSENGLVHHKNGKKL 502
VV ++YVF ENGLV +K+GK L
Sbjct: 60 VVEKYDYVFPENGLVAYKDGKLL 82
Score = 39.5 bits (88), Expect = 0.015
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = +2
Query: 782 QISIDVFPIGWDKTYCLNH 838
QIS DVFP GWDK YCL H
Sbjct: 177 QISFDVFPDGWDKRYCLRH 195
>AF157796-1|AAD45895.1| 246|Homo sapiens phosphomannomutase 2
protein.
Length = 246
Score = 98.3 bits (234), Expect = 3e-20
Identities = 42/85 (49%), Positives = 61/85 (71%)
Frame = +1
Query: 508 KSIVNHLGEQKLQEVINFAMGYMSNIKLPVKRGNFIEFRSSMLNICPVGRSCNQIERDQF 687
++I +HLGE +Q++IN+ + Y++ IKLP KRG FIEFR+ MLN+ P+GRSC+Q ER +F
Sbjct: 85 QNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEF 144
Query: 688 SEYDSKHKVRHQFVEALQSKFKDSG 762
E D K +R +FV L+ +F G
Sbjct: 145 YELDKKENIRQKFVADLRKEFAGKG 169
Score = 90.6 bits (215), Expect = 6e-18
Identities = 45/83 (54%), Positives = 60/83 (72%)
Frame = +2
Query: 254 ASQKKVLYLFDVDGTLTKPRQKITEEFRRFILDEVKSKVDVGLVSGSDYMKISEQMGGED 433
A+ L LFDVDGTLT PRQKIT+E F L +++ K+ +G+V GSD+ K+ EQ+ G D
Sbjct: 2 AAPGPALCLFDVDGTLTAPRQKITKEMDDF-LQKLRQKIKIGVVGGSDFEKVQEQL-GND 59
Query: 434 VVSNFNYVFSENGLVHHKNGKKL 502
VV ++YVF ENGLV +K+GK L
Sbjct: 60 VVEKYDYVFPENGLVAYKDGKLL 82
Score = 39.5 bits (88), Expect = 0.015
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = +2
Query: 782 QISIDVFPIGWDKTYCLNH 838
QIS DVFP GWDK YCL H
Sbjct: 177 QISFDVFPDGWDKRYCLRH 195
>AB209659-1|BAD92896.1| 165|Homo sapiens phosphomannomutase 2
variant protein.
Length = 165
Score = 66.1 bits (154), Expect = 1e-10
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = +1
Query: 595 VKRGNFIEFRSSMLNICPVGRSCNQIERDQFSEYDSKHKVRHQFVEALQSKFKDSG 762
+ RG FIEFR+ MLN+ P+GRSC+Q ER +F E D K +R +FV L+ +F G
Sbjct: 33 IPRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQKFVADLRKEFAGKG 88
Score = 39.5 bits (88), Expect = 0.015
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = +2
Query: 782 QISIDVFPIGWDKTYCLNH 838
QIS DVFP GWDK YCL H
Sbjct: 96 QISFDVFPDGWDKRYCLRH 114
>X98494-1|CAA67120.1| 672|Homo sapiens M phase phosphoprotein 10
protein.
Length = 672
Score = 31.1 bits (67), Expect = 5.2
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +2
Query: 305 KPRQKITEEFRRFILDEVKSKVDVGLVSGSDYMKISEQMGGED 433
KP++ E +R LD KSK+ + + +Y+K+++Q E+
Sbjct: 437 KPKEDAYEYKKRLTLDHEKSKLSLAEIYEQEYIKLNQQKTAEE 479
>BC126389-1|AAI26390.1| 681|Homo sapiens M-phase phosphoprotein 10
(U3 small nucleolar ribonucleoprotein) protein.
Length = 681
Score = 31.1 bits (67), Expect = 5.2
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +2
Query: 305 KPRQKITEEFRRFILDEVKSKVDVGLVSGSDYMKISEQMGGED 433
KP++ E +R LD KSK+ + + +Y+K+++Q E+
Sbjct: 446 KPKEDAYEYKKRLTLDHEKSKLSLAEIYEQEYIKLNQQKTAEE 488
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,108,913
Number of Sequences: 237096
Number of extensions: 2490627
Number of successful extensions: 4576
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4556
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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