Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1608
         (840 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT009926-1|AAQ22395.1|  254|Drosophila melanogaster SD26153p pro...   104   1e-22
AE014296-2161|AAF49899.1|  254|Drosophila melanogaster CG10688-P...   104   1e-22

>BT009926-1|AAQ22395.1|  254|Drosophila melanogaster SD26153p
           protein.
          Length = 254

 Score =  104 bits (250), Expect = 1e-22
 Identities = 40/88 (45%), Positives = 66/88 (75%)
 Frame = +1

Query: 493 KKIKFKSIVNHLGEQKLQEVINFAMGYMSNIKLPVKRGNFIEFRSSMLNICPVGRSCNQI 672
           K++  ++I+ HLGE+ ++  INF + Y+S + +P+KRG FIEFR+ M+N+CP+GR C + 
Sbjct: 86  KEVGKQNIIMHLGEETVKRFINFVLRYLSELDVPIKRGTFIEFRNGMMNVCPIGRQCTRE 145

Query: 673 ERDQFSEYDSKHKVRHQFVEALQSKFKD 756
           ER+ F+EYD +HKVR + ++ L+ +F D
Sbjct: 146 ERNMFAEYDIEHKVREKMIKDLKQEFAD 173



 Score = 85.8 bits (203), Expect = 7e-17
 Identities = 36/82 (43%), Positives = 54/82 (65%)
 Frame = +2

Query: 266 KVLYLFDVDGTLTKPRQKITEEFRRFILDEVKSKVDVGLVSGSDYMKISEQMGGEDVVSN 445
           ++L LFDVDGTLT PR  +T EF  F    VK +  +G+V GSD  K+ EQ+ G  +++ 
Sbjct: 10  EILLLFDVDGTLTMPRSVVTPEFEEFFYSRVKPRATIGIVGGSDLEKMFEQLNGRKILNE 69

Query: 446 FNYVFSENGLVHHKNGKKLSSR 511
           F+++F ENGLV  + GK++  +
Sbjct: 70  FDFIFPENGLVQIEGGKEVGKQ 91



 Score = 41.9 bits (94), Expect = 0.001
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = +2

Query: 782 QISIDVFPIGWDKTYCLNH 838
           QIS DVFP GWDKTYCL H
Sbjct: 183 QISFDVFPHGWDKTYCLRH 201


>AE014296-2161|AAF49899.1|  254|Drosophila melanogaster CG10688-PA
           protein.
          Length = 254

 Score =  104 bits (250), Expect = 1e-22
 Identities = 40/88 (45%), Positives = 66/88 (75%)
 Frame = +1

Query: 493 KKIKFKSIVNHLGEQKLQEVINFAMGYMSNIKLPVKRGNFIEFRSSMLNICPVGRSCNQI 672
           K++  ++I+ HLGE+ ++  INF + Y+S + +P+KRG FIEFR+ M+N+CP+GR C + 
Sbjct: 86  KEVGKQNIIMHLGEETVKRFINFVLRYLSELDVPIKRGTFIEFRNGMMNVCPIGRQCTRE 145

Query: 673 ERDQFSEYDSKHKVRHQFVEALQSKFKD 756
           ER+ F+EYD +HKVR + ++ L+ +F D
Sbjct: 146 ERNMFAEYDIEHKVREKMIKDLKQEFAD 173



 Score = 85.8 bits (203), Expect = 7e-17
 Identities = 36/82 (43%), Positives = 54/82 (65%)
 Frame = +2

Query: 266 KVLYLFDVDGTLTKPRQKITEEFRRFILDEVKSKVDVGLVSGSDYMKISEQMGGEDVVSN 445
           ++L LFDVDGTLT PR  +T EF  F    VK +  +G+V GSD  K+ EQ+ G  +++ 
Sbjct: 10  EILLLFDVDGTLTMPRSVVTPEFEEFFYSRVKPRATIGIVGGSDLEKMFEQLNGRKILNE 69

Query: 446 FNYVFSENGLVHHKNGKKLSSR 511
           F+++F ENGLV  + GK++  +
Sbjct: 70  FDFIFPENGLVQIEGGKEVGKQ 91



 Score = 41.9 bits (94), Expect = 0.001
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = +2

Query: 782 QISIDVFPIGWDKTYCLNH 838
           QIS DVFP GWDKTYCL H
Sbjct: 183 QISFDVFPHGWDKTYCLRH 201


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,184,421
Number of Sequences: 53049
Number of extensions: 777573
Number of successful extensions: 2127
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2127
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4003789140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)