BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1608 (840 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At2g45790.1 68415.m05695 eukaryotic phosphomannomutase family pr... 99 4e-21 At2g23180.1 68415.m02769 cytochrome P450, putative 30 2.2 At4g12430.1 68417.m01967 trehalose-6-phosphate phosphatase, puta... 29 3.8 At2g25870.1 68415.m03105 haloacid dehalogenase-like hydrolase fa... 29 3.8 At1g17665.1 68414.m02187 expressed protein 29 3.8 At5g50090.2 68418.m06203 expressed protein 29 5.1 At5g50090.1 68418.m06202 expressed protein 29 5.1 At4g22590.1 68417.m03259 trehalose-6-phosphate phosphatase, puta... 29 5.1 At1g74930.1 68414.m08693 AP2 domain-containing transcription fac... 29 5.1 At4g27595.1 68417.m03964 protein transport protein-related low s... 28 6.7 At5g17680.1 68418.m02072 disease resistance protein (TIR-NBS-LRR... 28 8.9 At4g18970.1 68417.m02794 GDSL-motif lipase/hydrolase family prot... 28 8.9 >At2g45790.1 68415.m05695 eukaryotic phosphomannomutase family protein contains Pfam profile: PF03332 eukaryotic phosphomannomutase Length = 246 Score = 98.7 bits (235), Expect = 4e-21 Identities = 40/86 (46%), Positives = 62/86 (72%) Frame = +1 Query: 493 KKIKFKSIVNHLGEQKLQEVINFAMGYMSNIKLPVKRGNFIEFRSSMLNICPVGRSCNQI 672 K I +S+ HLG+ KL+E+INF + Y++++ +P+KRG FIEFR+ MLN+ P+GR+C+Q Sbjct: 81 KSIGIQSLKLHLGDDKLKELINFTLHYIADLDIPIKRGTFIEFRNGMLNVSPIGRNCSQE 140 Query: 673 ERDQFSEYDSKHKVRHQFVEALQSKF 750 ERD+F YD +R + V L+ +F Sbjct: 141 ERDEFERYDKVQNIRPKMVAELRERF 166 Score = 83.4 bits (197), Expect = 2e-16 Identities = 42/78 (53%), Positives = 57/78 (73%) Frame = +2 Query: 269 VLYLFDVDGTLTKPRQKITEEFRRFILDEVKSKVDVGLVSGSDYMKISEQMGGEDVVSNF 448 V+ LFDVDGTLT PR++ T E FI E++ V +G+V GSD KISEQ+G + V +++ Sbjct: 8 VIALFDVDGTLTAPRKEATPELLDFIR-ELRKVVTIGVVGGSDLSKISEQLG-KTVTNDY 65 Query: 449 NYVFSENGLVHHKNGKKL 502 +Y FSENGLV HK+GK + Sbjct: 66 DYCFSENGLVAHKDGKSI 83 Score = 39.5 bits (88), Expect = 0.003 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = +2 Query: 782 QISIDVFPIGWDKTYCLNH 838 QIS DVFP GWDKTYCL + Sbjct: 178 QISFDVFPKGWDKTYCLQY 196 >At2g23180.1 68415.m02769 cytochrome P450, putative Length = 516 Score = 29.9 bits (64), Expect = 2.2 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 7/66 (10%) Frame = +2 Query: 278 LFDVDGTLTKPRQKITE------EFRRFILDEVKSKVDVGLVSGSDYMKISEQMGG-EDV 436 +F+ D L K +K + +F+RF L + SK++ GLV DY+ +Q+ +DV Sbjct: 117 IFNADSELWKDLRKSAQSMMTHQDFQRFTLRTIMSKLEKGLVPLLDYVAEKKQVVDLQDV 176 Query: 437 VSNFNY 454 F + Sbjct: 177 FQRFTF 182 >At4g12430.1 68417.m01967 trehalose-6-phosphate phosphatase, putative similar to trehalose-6-phosphate phosphatase (AtTPPB) [Arabidopsis thaliana] GI:2944180; contains Pfam profile PF02358: Trehalose-phosphatase Length = 368 Score = 29.1 bits (62), Expect = 3.8 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 4/70 (5%) Frame = +2 Query: 227 TSFTF*DNYASQKKVLYLFDVDGTLT----KPRQKITEEFRRFILDEVKSKVDVGLVSGS 394 +SF A +KK+ D DGTL+ P + I + R + +V S ++SG Sbjct: 91 SSFAHIAAQAKKKKIAVFLDYDGTLSPIVDDPDRAIMSDAMRSAVKDVASYFPTAIISGR 150 Query: 395 DYMKISEQMG 424 K+ + +G Sbjct: 151 SRDKVYQLVG 160 >At2g25870.1 68415.m03105 haloacid dehalogenase-like hydrolase family protein contains Pfam profiles PF00702: haloacid dehalogenase-like hydrolase, PF02130: Uncharacterized protein family UPF0054 Length = 584 Score = 29.1 bits (62), Expect = 3.8 Identities = 21/87 (24%), Positives = 45/87 (51%), Gaps = 8/87 (9%) Frame = +2 Query: 266 KVLYLF-DVDGTLTKPRQKITEEFRRFILDEVKSKVDVGLVSGSD------YMKISEQMG 424 K Y+F D+DGTL + +I+E + + + + + V + +G +K ++ G Sbjct: 311 KFSYIFCDMDGTLLNSKSQISEANAKALKEALLRGLKVVIATGKSRPGAIRILKTADLTG 370 Query: 425 GEDVVSNFN-YVFSENGLVHHKNGKKL 502 + ++S + VF + LV+ + GK++ Sbjct: 371 SDGIISESSPGVFVQGLLVYGRQGKEV 397 >At1g17665.1 68414.m02187 expressed protein Length = 338 Score = 29.1 bits (62), Expect = 3.8 Identities = 15/39 (38%), Positives = 18/39 (46%) Frame = -1 Query: 198 SISRTPPENIKCQHFTQTRQTVTVNTKLQYRELINFNNA 82 SIS PE + FT T K QY +L+ NNA Sbjct: 159 SISENKPEFVCLYPFTSTSSATQRKIKQQYDQLVKCNNA 197 >At5g50090.2 68418.m06203 expressed protein Length = 153 Score = 28.7 bits (61), Expect = 5.1 Identities = 10/27 (37%), Positives = 19/27 (70%) Frame = +3 Query: 393 QII*RFPNKWAERTSCPISTTYSVKMD 473 +++ + PN E+ SCP+S +Y +KM+ Sbjct: 11 RVVIQHPNGKEEKLSCPVSASYVMKMN 37 >At5g50090.1 68418.m06202 expressed protein Length = 159 Score = 28.7 bits (61), Expect = 5.1 Identities = 10/27 (37%), Positives = 19/27 (70%) Frame = +3 Query: 393 QII*RFPNKWAERTSCPISTTYSVKMD 473 +++ + PN E+ SCP+S +Y +KM+ Sbjct: 11 RVVIQHPNGKEEKLSCPVSASYVMKMN 37 >At4g22590.1 68417.m03259 trehalose-6-phosphate phosphatase, putative similar to trehalose-6-phosphate phosphatase (AtTPPA) GI:2944178; contains Pfam profile PF02358: Trehalose-phosphatase Length = 377 Score = 28.7 bits (61), Expect = 5.1 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 4/70 (5%) Frame = +2 Query: 227 TSFTF*DNYASQKKVLYLFDVDGTLT----KPRQKITEEFRRFILDEVKSKVDVGLVSGS 394 TSF A KK+ D DGTL+ P + I + R + +V ++SG Sbjct: 94 TSFAHIAAQAKNKKIAVFLDYDGTLSPIVDDPDRAIMSDAMRAAVKDVAKYFPTAIISGR 153 Query: 395 DYMKISEQMG 424 K+ + +G Sbjct: 154 SRDKVYQLVG 163 >At1g74930.1 68414.m08693 AP2 domain-containing transcription factor, putative similar to AP2 domain containing protein RAP2.1 GI:2281627 from [Arabidopsis thaliana] Length = 195 Score = 28.7 bits (61), Expect = 5.1 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Frame = +2 Query: 287 VDGTLTKPR-QKITEEFRRFILDEVKSKVDVGLVSGSDYMKISEQMGGEDVVSNFNYVFS 463 V+ +LT P Q+ F D VK + + GLV GS+ S S +Y FS Sbjct: 85 VEKSLTPPEIQEAAARFANTFQDIVKGEEESGLVPGSEIRPESPSTSASVATSTVDYDFS 144 >At4g27595.1 68417.m03964 protein transport protein-related low similarity to SP|P25386 Intracellular protein transport protein USO1 {Saccharomyces cerevisiae} Length = 1212 Score = 28.3 bits (60), Expect = 6.7 Identities = 17/73 (23%), Positives = 37/73 (50%), Gaps = 1/73 (1%) Frame = +2 Query: 230 SFTF*DNYASQKKVLYLFDVDGTLTKPRQKITEEFRRFILDEVKSKVDVGLVSGSDYMKI 409 +F+ + + K +L+L +V+ K + R+ + +E+K ++ V+ +D MK+ Sbjct: 555 NFSVQEELSKVKNLLHLKEVEACAAKEEDAKMQTNRKELEEEIKDLQEIVEVAKADSMKL 614 Query: 410 SEQM-GGEDVVSN 445 E + ED + N Sbjct: 615 KESLVEKEDELKN 627 >At5g17680.1 68418.m02072 disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein. Length = 1294 Score = 27.9 bits (59), Expect = 8.9 Identities = 11/34 (32%), Positives = 18/34 (52%) Frame = -3 Query: 376 YIHF*FYLVKNEPPEFFCNFLARFCQRSVNIEQI 275 Y+ + Y +K P FF FL C + N+E++ Sbjct: 584 YLRWDGYPLKTMPSRFFPEFLVELCMSNSNLEKL 617 >At4g18970.1 68417.m02794 GDSL-motif lipase/hydrolase family protein similar to family II lipases EXL3 GI:15054386, EXL1 GI:15054382, EXL2 GI:15054384 from [Arabidopsis thaliana]; contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase Length = 361 Score = 27.9 bits (59), Expect = 8.9 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%) Frame = +2 Query: 359 KSKVDV--GLVSGSDYMKISEQMGGEDVVSNFNYVFSENGLVHHKNGKKLSSR 511 K+ VDV L+ DY+ + GED++ NY + G + + G++L +R Sbjct: 72 KTTVDVITELLGFDDYITPYSEARGEDILRGVNYASAAAG-IREETGRQLGAR 123 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,006,751 Number of Sequences: 28952 Number of extensions: 375007 Number of successful extensions: 915 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 892 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 913 length of database: 12,070,560 effective HSP length: 80 effective length of database: 9,754,400 effective search space used: 1941125600 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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