Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1607
(767 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF457553-1|AAL68783.1| 178|Anopheles gambiae mucin-like protein... 30 0.090
AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein. 28 0.28
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 25 1.9
AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. 25 1.9
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 25 1.9
AJ007394-1|CAA07489.1| 112|Anopheles gambiae mucin protein. 25 1.9
AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 25 2.6
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 25 3.4
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 24 4.5
AY805323-1|AAV66543.1| 459|Anopheles gambiae beta subunit-GABA-... 24 5.9
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 24 5.9
AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 23 7.9
AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein. 23 7.9
AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein prot... 23 7.9
>AF457553-1|AAL68783.1| 178|Anopheles gambiae mucin-like protein
protein.
Length = 178
Score = 29.9 bits (64), Expect = 0.090
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +2
Query: 44 SKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPAS 187
++Q +RY + T A ++ +T +++ TTA A+TT++ S
Sbjct: 52 AQQRIQQRYGVTVATTSAATTTAATTSAATTSEATTTAAASTTQASDS 99
Score = 27.9 bits (59), Expect = 0.37
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +2
Query: 53 STSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATAE 202
+T+ S ++ + TTTAA + + S + + TTA A TT + ++++
Sbjct: 72 TTAATTSAATTSEATTTAAASTTQASDSDNTTTTAEATTTTEAQTTSSSD 121
>AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein.
Length = 189
Score = 28.3 bits (60), Expect = 0.28
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +2
Query: 23 SVKSRKRSKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATAE 202
SV S ++ ST+ +T + + TTT + +T T+ TT ATT A+ TAE
Sbjct: 127 SVASPTTAEASTTTEAATTTQ-EATTTEEATTTEEATTTEKATTTEEATTTEEAT-TTAE 184
Score = 26.6 bits (56), Expect = 0.84
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +2
Query: 41 RSKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPAS 187
R ST+ T S PTT A + +T T+ TT ATT A+
Sbjct: 115 RPTTSTAAPEGT-SVASPTTAEASTTTEAATTTQEATTTEEATTTEEAT 162
Score = 25.4 bits (53), Expect = 1.9
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 44 SKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTE 175
++++T+ +T + TT A +T ++ TTA A TTE
Sbjct: 146 TQEATTTEEATTTEEATTTEKATTTEEATTTEEATTTAEATTTE 189
Score = 25.0 bits (52), Expect = 2.6
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 53 STSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPAS 187
+T E +TE + TTT + +T T+ TT ATT + A+
Sbjct: 145 TTQEATTTEEA---TTTEEATTTEKATTTEEATTTEEATTTAEAT 186
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 25.4 bits (53), Expect = 1.9
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 71 STESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFAT 196
+T S+ TTT + +T T ++ T ATT +PAS T
Sbjct: 163 TTWSAPTTTTTWSDQPPPPTTTTTTVWTDSTATTTTPASTTT 204
Score = 23.4 bits (48), Expect = 7.9
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 53 STSERYSTESSVDPTTTAAGAKSNYSTATKS-ITTAVAATTESPAS 187
+T+ +S PTTT ++ +T T + TTA TT P S
Sbjct: 235 TTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYPPTTNEPPS 280
>AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 25.4 bits (53), Expect = 1.9
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 71 STESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFAT 196
+T S+ TTT + +T T ++ T ATT +PAS T
Sbjct: 162 TTWSAPTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPASTTT 203
Score = 23.4 bits (48), Expect = 7.9
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 53 STSERYSTESSVDPTTTAAGAKSNYSTATKS-ITTAVAATTESPAS 187
+T+ +S PTTT ++ +T T + TTA TT P S
Sbjct: 234 TTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYPPTTNEPPS 279
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 25.4 bits (53), Expect = 1.9
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 71 STESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFAT 196
+T S+ TTT + +T T ++ T ATT +PAS T
Sbjct: 162 TTWSAPTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPASTTT 203
Score = 23.4 bits (48), Expect = 7.9
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 53 STSERYSTESSVDPTTTAAGAKSNYSTATKS-ITTAVAATTESPAS 187
+T+ +S PTTT ++ +T T + TTA TT P S
Sbjct: 234 TTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYPPTTNEPPS 279
>AJ007394-1|CAA07489.1| 112|Anopheles gambiae mucin protein.
Length = 112
Score = 25.4 bits (53), Expect = 1.9
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +2
Query: 53 STSERYSTESSVDPTTT---AAGAKSNYSTATKSITTAVAATTESPAS 187
+T+ +T ++V PTTT A G + + A+ +TT + T +P+S
Sbjct: 40 TTTVAPTTTTTVAPTTTTTVAPGQTTTTTVASGPVTTTGSTDTTTPSS 87
>AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 25.0 bits (52), Expect = 2.6
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 53 STSERYSTESSVDPTTTAAGAKSNYSTA-TKSITTAVAATTESPAS 187
+T+ +S + PTTT ++ +T T TTA TT P S
Sbjct: 235 TTTTTWSDQPPPPPTTTTTTVWTDPTTTITTDYTTAYPPTTNEPPS 280
Score = 23.4 bits (48), Expect = 7.9
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 71 STESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFAT 196
+T S+ TTT + +T T ++ T ATT +PA T
Sbjct: 163 TTWSAPTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPAPTTT 204
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 24.6 bits (51), Expect = 3.4
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 130 NSNKVNYNSSCSNNRISSKLCNSRT 204
N+N N +SSC NN +SS N+ T
Sbjct: 157 NNNNSNSSSSC-NNHVSSNTNNNGT 180
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 24.2 bits (50), Expect = 4.5
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 53 STSERYSTESSVDPTTTAAGAKSNYST 133
ST YS++S+ TTT + + S++ST
Sbjct: 468 STYCTYSSDSTTTTTTTKSASTSSHST 494
>AY805323-1|AAV66543.1| 459|Anopheles gambiae beta
subunit-GABA-A-gated chloride channelprotein.
Length = 459
Score = 23.8 bits (49), Expect = 5.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 396 TKLLNQYSSNNKLYKNTFKLFSNNRYRQ 479
T LNQY + +L N F L+ +N+ Q
Sbjct: 45 TMYLNQYWKDERLAFNAFALWGDNQKDQ 72
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 23.8 bits (49), Expect = 5.9
Identities = 9/35 (25%), Positives = 19/35 (54%)
Frame = +1
Query: 643 EEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQR 747
+E K + + V+ AAF + CA+ + +++ R
Sbjct: 325 DERKTELDEAKVMLAAFVQDCADSATALGSEDQVR 359
>AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.4 bits (48), Expect = 7.9
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 71 STESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFAT 196
+T S+ TTT + +T T ++ T ATT +PA T
Sbjct: 163 TTWSAPTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPAPTTT 204
Score = 23.4 bits (48), Expect = 7.9
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 53 STSERYSTESSVDPTTTAAGAKSNYSTATKS-ITTAVAATTESPAS 187
+T+ +S PTTT ++ +T T + TTA TT P S
Sbjct: 235 TTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYPPTTNEPPS 280
>AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.4 bits (48), Expect = 7.9
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 53 STSERYSTESSVDPTTTAAGAKSNYSTATKS-ITTAVAATTESPAS 187
+T+ +S PTTT ++ +T T + TTA TT P S
Sbjct: 235 TTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYPPTTNEPPS 280
>AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein
protein.
Length = 373
Score = 23.4 bits (48), Expect = 7.9
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 53 STSERYSTESSVDPTTTAAGAKSNYSTATKS-ITTAVAATTESPAS 187
+T+ +S PTTT ++ +T T + TTA TT P S
Sbjct: 235 TTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYPPTTSEPPS 280
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 451,321
Number of Sequences: 2352
Number of extensions: 7139
Number of successful extensions: 59
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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