BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1607 (767 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value X62534-1|CAA44395.1| 209|Homo sapiens HMG-2 protein. 99 2e-20 M83665-1|AAA58659.1| 209|Homo sapiens high mobility group 2 pro... 99 2e-20 BT019783-1|AAV38586.1| 208|Homo sapiens high-mobility group box... 99 2e-20 BT019782-1|AAV38585.1| 209|Homo sapiens high-mobility group box... 99 2e-20 BC100019-1|AAI00020.1| 209|Homo sapiens HMGB2 protein protein. 99 2e-20 BC001063-1|AAH01063.1| 209|Homo sapiens high-mobility group box... 99 2e-20 BX537505-1|CAD97768.1| 127|Homo sapiens hypothetical protein pr... 97 5e-20 X12597-1|CAA31110.1| 215|Homo sapiens protein ( Human mRNA for ... 95 2e-19 U51677-1|AAB08987.1| 215|Homo sapiens non-histone chromatin pro... 95 2e-19 EU012027-1|ABS29271.1| 215|Homo sapiens high-mobility group box... 95 2e-19 EF157968-1|ABM47301.1| 215|Homo sapiens high mobility group box... 95 2e-19 CR456863-1|CAG33144.1| 215|Homo sapiens HMGB1 protein. 95 2e-19 BT020159-1|AAV38961.1| 215|Homo sapiens high-mobility group box... 95 2e-19 BT006940-1|AAP35586.1| 215|Homo sapiens high-mobility group box... 95 2e-19 BC141844-1|AAI41845.1| 215|Homo sapiens high-mobility group box... 95 2e-19 BC067732-1|AAH67732.1| 215|Homo sapiens high-mobility group box... 95 2e-19 BC066889-1|AAH66889.1| 215|Homo sapiens high-mobility group box... 95 2e-19 BC030981-1|AAH30981.1| 215|Homo sapiens high-mobility group box... 95 2e-19 BC003378-1|AAH03378.1| 215|Homo sapiens high-mobility group box... 95 2e-19 AY377859-1|AAQ91389.1| 215|Homo sapiens high mobility group pro... 95 2e-19 AL353648-4|CAI15606.1| 97|Homo sapiens high-mobility group box... 95 2e-19 AL353648-3|CAI15603.1| 158|Homo sapiens high-mobility group box... 95 2e-19 AL353648-2|CAI15601.1| 162|Homo sapiens high-mobility group box... 95 2e-19 AL353648-1|CAI15600.1| 215|Homo sapiens high-mobility group box... 95 2e-19 AB208998-1|BAD92235.1| 176|Homo sapiens high-mobility group box... 95 2e-19 BC070482-1|AAH70482.1| 200|Homo sapiens HMGB3 protein protein. 93 8e-19 L08048-1|AAA64970.1| 216|Homo sapiens HMG-1 protein. 93 1e-18 D63874-1|BAA09924.1| 215|Homo sapiens HMG-1 protein. 92 2e-18 L05085-1|AAC15850.1| 109|Homo sapiens non-histone chromosomal p... 91 4e-18 Y10043-1|CAA71143.1| 200|Homo sapiens high mobility group prote... 89 1e-17 AC007277-1|AAF19244.1| 191|Homo sapiens WUGSC:H_NH0244E06.1 pro... 88 4e-17 Z95115-3|CAB62951.1| 211|Homo sapiens high-mobility group (nonh... 82 2e-15 AF281043-1|AAK64599.1| 50|Homo sapiens high mobility group 1 p... 82 2e-15 AF255609-1|AAF71287.1| 50|Homo sapiens high mobility group pro... 82 2e-15 Z17240-1|CAA78938.1| 186|Homo sapiens HMG2B protein. 65 2e-10 L79988-1|AAL77438.1| 403|Homo sapiens nuclear autoantigen protein. 52 2e-06 AF056322-1|AAC39790.1| 879|Homo sapiens SP100-HMG nuclear autoa... 52 2e-06 AC010149-1|AAY14879.1| 843|Homo sapiens unknown protein. 52 2e-06 AF076675-2|AAF39781.1| 181|Homo sapiens SP100-HMG protein. 52 3e-06 DQ207367-1|ABB22048.1| 186|Homo sapiens HMG2-like protein protein. 49 2e-05 BC021180-1|AAH21180.1| 186|Homo sapiens high-mobility group box... 49 2e-05 AF378670-1|AAK57703.1| 26|Homo sapiens SP100 protein. 42 0.002 M86737-1|AAA58660.1| 709|Homo sapiens high mobility group box p... 40 0.013 BC091486-1|AAH91486.1| 633|Homo sapiens SSRP1 protein protein. 40 0.013 BC005116-1|AAH05116.1| 709|Homo sapiens structure specific reco... 40 0.013 BT006716-1|AAP35362.1| 347|Homo sapiens high-mobility group 20A... 38 0.040 BC021959-1|AAH21959.1| 347|Homo sapiens high-mobility group 20A... 38 0.040 AL355737-1|CAB90816.1| 347|Homo sapiens HMG20A protein. 38 0.040 AK223100-1|BAD96820.1| 347|Homo sapiens high-mobility group 20A... 38 0.040 AK001601-1|BAA91782.1| 347|Homo sapiens protein ( Homo sapiens ... 38 0.040 AF146222-1|AAF66706.1| 347|Homo sapiens HMG domain protein HMGX... 38 0.040 BC004408-1|AAH04408.2| 317|Homo sapiens high-mobility group 20B... 38 0.052 BC003505-1|AAH03505.2| 317|Homo sapiens high-mobility group 20B... 38 0.052 BC002552-1|AAH02552.1| 317|Homo sapiens HMG20B protein protein. 38 0.052 AL355709-1|CAB90809.2| 317|Homo sapiens HMG20B protein. 38 0.052 AF331191-1|AAG60060.1| 317|Homo sapiens structural DNA-binding ... 38 0.052 AF288679-1|AAG01174.1| 317|Homo sapiens smarce1-related protein... 38 0.052 AF146223-1|AAF66707.1| 317|Homo sapiens HMG domain protein HMGX... 38 0.052 BC007636-1|AAH07636.1| 464|Homo sapiens Unknown (protein for MG... 36 0.21 AL121587-3|CAI21561.1| 464|Homo sapiens chromosome 20 open read... 36 0.21 AL034419-4|CAI42201.1| 464|Homo sapiens chromosome 20 open read... 36 0.21 BC013689-1|AAH13689.1| 621|Homo sapiens TOX high mobility group... 34 0.49 AB018280-1|BAA34457.2| 629|Homo sapiens KIAA0737 protein protein. 34 0.49 U80736-1|AAB91435.1| 331|Homo sapiens CAGF9 protein. 34 0.64 AL121587-1|CAI21559.1| 488|Homo sapiens chromosome 20 open read... 33 0.85 AL034419-1|CAI42198.1| 488|Homo sapiens chromosome 20 open read... 33 0.85 AK055135-1|BAB70860.1| 488|Homo sapiens protein ( Homo sapiens ... 33 0.85 BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 33 1.1 BC041155-1|AAH41155.1| 311|Homo sapiens SRRM2 protein protein. 33 1.1 AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 33 1.1 AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 33 1.1 AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 33 1.1 AB015644-1|BAA34957.1| 229|Homo sapiens RNA binding protein pro... 33 1.1 AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 33 1.1 CR456504-1|CAG30390.1| 601|Homo sapiens HMG2L1 protein. 31 4.5 BC104756-1|AAI04757.1| 492|Homo sapiens HMG2L1 protein protein. 31 4.5 BC104754-1|AAI04755.1| 492|Homo sapiens HMG2L1 protein protein. 31 4.5 AL079310-1|CAB45240.1| 492|Homo sapiens hypothetical protein pr... 31 4.5 AL008635-1|CAI21632.1| 601|Homo sapiens high-mobility group pro... 31 4.5 BC103851-1|AAI03852.1| 130|Homo sapiens HMG4L protein protein. 30 7.9 BC103850-1|AAI03851.1| 130|Homo sapiens HMG4L protein protein. 30 7.9 BC103849-1|AAI03850.1| 130|Homo sapiens HMG4L protein protein. 30 7.9 >X62534-1|CAA44395.1| 209|Homo sapiens HMG-2 protein. Length = 209 Score = 99.1 bits (236), Expect = 2e-20 Identities = 42/54 (77%), Positives = 48/54 (88%) Frame = +1 Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 NKPRG+M++YAFFVQTCREEHKKK+PD SV FA FSKKC+ERW TMS KEK +F Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60 Score = 31.5 bits (68), Expect = 3.4 Identities = 17/54 (31%), Positives = 28/54 (51%) Frame = +1 Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 N P+ +A+ F R + K ++P +S+ A KK E W+ S K+KQ + Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTA--KKLGEMWSEQSAKDKQPY 144 >M83665-1|AAA58659.1| 209|Homo sapiens high mobility group 2 protein protein. Length = 209 Score = 99.1 bits (236), Expect = 2e-20 Identities = 42/54 (77%), Positives = 48/54 (88%) Frame = +1 Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 NKPRG+M++YAFFVQTCREEHKKK+PD SV FA FSKKC+ERW TMS KEK +F Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60 Score = 31.5 bits (68), Expect = 3.4 Identities = 17/54 (31%), Positives = 28/54 (51%) Frame = +1 Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 N P+ +A+ F R + K ++P +S+ A KK E W+ S K+KQ + Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTA--KKLGEMWSEQSAKDKQPY 144 >BT019783-1|AAV38586.1| 208|Homo sapiens high-mobility group box 2 protein. Length = 208 Score = 99.1 bits (236), Expect = 2e-20 Identities = 42/54 (77%), Positives = 48/54 (88%) Frame = +1 Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 NKPRG+M++YAFFVQTCREEHKKK+PD SV FA FSKKC+ERW TMS KEK +F Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60 Score = 31.5 bits (68), Expect = 3.4 Identities = 17/54 (31%), Positives = 28/54 (51%) Frame = +1 Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 N P+ +A+ F R + K ++P +S+ A KK E W+ S K+KQ + Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTA--KKLGEMWSEQSAKDKQPY 144 >BT019782-1|AAV38585.1| 209|Homo sapiens high-mobility group box 2 protein. Length = 209 Score = 99.1 bits (236), Expect = 2e-20 Identities = 42/54 (77%), Positives = 48/54 (88%) Frame = +1 Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 NKPRG+M++YAFFVQTCREEHKKK+PD SV FA FSKKC+ERW TMS KEK +F Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60 Score = 31.5 bits (68), Expect = 3.4 Identities = 17/54 (31%), Positives = 28/54 (51%) Frame = +1 Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 N P+ +A+ F R + K ++P +S+ A KK E W+ S K+KQ + Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTA--KKLGEMWSEQSAKDKQPY 144 >BC100019-1|AAI00020.1| 209|Homo sapiens HMGB2 protein protein. Length = 209 Score = 99.1 bits (236), Expect = 2e-20 Identities = 42/54 (77%), Positives = 48/54 (88%) Frame = +1 Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 NKPRG+M++YAFFVQTCREEHKKK+PD SV FA FSKKC+ERW TMS KEK +F Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60 Score = 31.5 bits (68), Expect = 3.4 Identities = 17/54 (31%), Positives = 28/54 (51%) Frame = +1 Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 N P+ +A+ F R + K ++P +S+ A KK E W+ S K+KQ + Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTA--KKLGEMWSEQSAKDKQPY 144 >BC001063-1|AAH01063.1| 209|Homo sapiens high-mobility group box 2 protein. Length = 209 Score = 99.1 bits (236), Expect = 2e-20 Identities = 42/54 (77%), Positives = 48/54 (88%) Frame = +1 Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 NKPRG+M++YAFFVQTCREEHKKK+PD SV FA FSKKC+ERW TMS KEK +F Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60 Score = 31.5 bits (68), Expect = 3.4 Identities = 17/54 (31%), Positives = 28/54 (51%) Frame = +1 Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 N P+ +A+ F R + K ++P +S+ A KK E W+ S K+KQ + Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTA--KKLGEMWSEQSAKDKQPY 144 >BX537505-1|CAD97768.1| 127|Homo sapiens hypothetical protein protein. Length = 127 Score = 97.5 bits (232), Expect = 5e-20 Identities = 44/65 (67%), Positives = 51/65 (78%) Frame = +1 Query: 556 NKARMPRSRPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEK 735 N RM + P KP+G+M+AYAFFVQTCREEHKKK P+V V FA FSKKC+ERW TMS K Sbjct: 27 NTVRMAKGDP-KKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGK 85 Query: 736 EKQRF 750 EK +F Sbjct: 86 EKSKF 90 >X12597-1|CAA31110.1| 215|Homo sapiens protein ( Human mRNA for high mobility group-1 protein (HMG-1). ). Length = 215 Score = 95.5 bits (227), Expect = 2e-19 Identities = 40/53 (75%), Positives = 47/53 (88%) Frame = +1 Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60 >U51677-1|AAB08987.1| 215|Homo sapiens non-histone chromatin protein HMG1 protein. Length = 215 Score = 95.5 bits (227), Expect = 2e-19 Identities = 40/53 (75%), Positives = 47/53 (88%) Frame = +1 Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60 >EU012027-1|ABS29271.1| 215|Homo sapiens high-mobility group box 1 protein. Length = 215 Score = 95.5 bits (227), Expect = 2e-19 Identities = 40/53 (75%), Positives = 47/53 (88%) Frame = +1 Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60 >EF157968-1|ABM47301.1| 215|Homo sapiens high mobility group box 1 protein protein. Length = 215 Score = 95.5 bits (227), Expect = 2e-19 Identities = 40/53 (75%), Positives = 47/53 (88%) Frame = +1 Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60 >CR456863-1|CAG33144.1| 215|Homo sapiens HMGB1 protein. Length = 215 Score = 95.5 bits (227), Expect = 2e-19 Identities = 40/53 (75%), Positives = 47/53 (88%) Frame = +1 Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60 >BT020159-1|AAV38961.1| 215|Homo sapiens high-mobility group box 1 protein. Length = 215 Score = 95.5 bits (227), Expect = 2e-19 Identities = 40/53 (75%), Positives = 47/53 (88%) Frame = +1 Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60 >BT006940-1|AAP35586.1| 215|Homo sapiens high-mobility group box 1 protein. Length = 215 Score = 95.5 bits (227), Expect = 2e-19 Identities = 40/53 (75%), Positives = 47/53 (88%) Frame = +1 Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60 >BC141844-1|AAI41845.1| 215|Homo sapiens high-mobility group box 1 protein. Length = 215 Score = 95.5 bits (227), Expect = 2e-19 Identities = 40/53 (75%), Positives = 47/53 (88%) Frame = +1 Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60 Score = 30.7 bits (66), Expect = 6.0 Identities = 15/54 (27%), Positives = 27/54 (50%) Frame = +1 Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 N P+ +A+ F R + K ++P +S+ +KK E WN + +KQ + Sbjct: 93 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSI--GDVAKKLGEMWNNTAADDKQHY 144 >BC067732-1|AAH67732.1| 215|Homo sapiens high-mobility group box 1 protein. Length = 215 Score = 95.5 bits (227), Expect = 2e-19 Identities = 40/53 (75%), Positives = 47/53 (88%) Frame = +1 Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60 >BC066889-1|AAH66889.1| 215|Homo sapiens high-mobility group box 1 protein. Length = 215 Score = 95.5 bits (227), Expect = 2e-19 Identities = 40/53 (75%), Positives = 47/53 (88%) Frame = +1 Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60 >BC030981-1|AAH30981.1| 215|Homo sapiens high-mobility group box 1 protein. Length = 215 Score = 95.5 bits (227), Expect = 2e-19 Identities = 40/53 (75%), Positives = 47/53 (88%) Frame = +1 Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60 >BC003378-1|AAH03378.1| 215|Homo sapiens high-mobility group box 1 protein. Length = 215 Score = 95.5 bits (227), Expect = 2e-19 Identities = 40/53 (75%), Positives = 47/53 (88%) Frame = +1 Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60 >AY377859-1|AAQ91389.1| 215|Homo sapiens high mobility group protein 1 protein. Length = 215 Score = 95.5 bits (227), Expect = 2e-19 Identities = 40/53 (75%), Positives = 47/53 (88%) Frame = +1 Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60 >AL353648-4|CAI15606.1| 97|Homo sapiens high-mobility group box 1 protein. Length = 97 Score = 95.5 bits (227), Expect = 2e-19 Identities = 40/53 (75%), Positives = 47/53 (88%) Frame = +1 Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60 >AL353648-3|CAI15603.1| 158|Homo sapiens high-mobility group box 1 protein. Length = 158 Score = 95.5 bits (227), Expect = 2e-19 Identities = 40/53 (75%), Positives = 47/53 (88%) Frame = +1 Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60 >AL353648-2|CAI15601.1| 162|Homo sapiens high-mobility group box 1 protein. Length = 162 Score = 95.5 bits (227), Expect = 2e-19 Identities = 40/53 (75%), Positives = 47/53 (88%) Frame = +1 Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60 >AL353648-1|CAI15600.1| 215|Homo sapiens high-mobility group box 1 protein. Length = 215 Score = 95.5 bits (227), Expect = 2e-19 Identities = 40/53 (75%), Positives = 47/53 (88%) Frame = +1 Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60 >AB208998-1|BAD92235.1| 176|Homo sapiens high-mobility group box 1 variant protein. Length = 176 Score = 95.5 bits (227), Expect = 2e-19 Identities = 40/53 (75%), Positives = 47/53 (88%) Frame = +1 Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F Sbjct: 10 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 62 >BC070482-1|AAH70482.1| 200|Homo sapiens HMGB3 protein protein. Length = 200 Score = 93.5 bits (222), Expect = 8e-19 Identities = 40/53 (75%), Positives = 46/53 (86%) Frame = +1 Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 KP+G+M+AYAFFVQTCREEHKKK P+V V FA FSKKC+ERW TMS KEK +F Sbjct: 8 KPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKF 60 Score = 32.3 bits (70), Expect = 2.0 Identities = 15/55 (27%), Positives = 27/55 (49%) Frame = +1 Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFL 753 N P+ + + F R + K P +S+ +KK E WN +++ EKQ ++ Sbjct: 91 NAPKRPPSGFFLFCSEFRPKIKSTNPGISI--GDVAKKLGEMWNNLNDSEKQPYI 143 >L08048-1|AAA64970.1| 216|Homo sapiens HMG-1 protein. Length = 216 Score = 93.1 bits (221), Expect = 1e-18 Identities = 39/53 (73%), Positives = 46/53 (86%) Frame = +1 Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 KP G+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F Sbjct: 8 KPTGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60 >D63874-1|BAA09924.1| 215|Homo sapiens HMG-1 protein. Length = 215 Score = 92.3 bits (219), Expect = 2e-18 Identities = 39/53 (73%), Positives = 46/53 (86%) Frame = +1 Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 KPR +M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F Sbjct: 8 KPRRKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60 >L05085-1|AAC15850.1| 109|Homo sapiens non-histone chromosomal protein protein. Length = 109 Score = 91.1 bits (216), Expect = 4e-18 Identities = 39/53 (73%), Positives = 45/53 (84%) Frame = +1 Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 KP+G+M+AYAFFVQTCREEHKK P+V V FA FSKKC+ERW TMS KEK +F Sbjct: 8 KPKGKMSAYAFFVQTCREEHKKXNPEVPVNFAEFSKKCSERWKTMSGKEKSKF 60 >Y10043-1|CAA71143.1| 200|Homo sapiens high mobility group protein 2a protein. Length = 200 Score = 89.4 bits (212), Expect = 1e-17 Identities = 38/53 (71%), Positives = 45/53 (84%) Frame = +1 Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 KP+G+ +AYAFFVQTCREEHKKK P+V V FA FSKKC+ERW T+S KEK +F Sbjct: 8 KPKGKTSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTVSGKEKSKF 60 Score = 32.3 bits (70), Expect = 2.0 Identities = 15/55 (27%), Positives = 27/55 (49%) Frame = +1 Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFL 753 N P+ + + F R + K P +S+ +KK E WN +++ EKQ ++ Sbjct: 91 NAPKRPPSGFFLFCSEFRPKIKSTNPGISI--GDVAKKLGEMWNNLNDSEKQPYI 143 >AC007277-1|AAF19244.1| 191|Homo sapiens WUGSC:H_NH0244E06.1 protein. Length = 191 Score = 87.8 bits (208), Expect = 4e-17 Identities = 37/53 (69%), Positives = 45/53 (84%) Frame = +1 Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 KPRG+M++YAFFVQTCREE KKK+PD SV F+ FSKKC+ERW MS K+K +F Sbjct: 8 KPRGKMSSYAFFVQTCREECKKKHPDASVNFSEFSKKCSERWKAMSAKDKGKF 60 >Z95115-3|CAB62951.1| 211|Homo sapiens high-mobility group (nonhistone chromosomal) protein 1-like 10 protein. Length = 211 Score = 81.8 bits (193), Expect = 2e-15 Identities = 35/53 (66%), Positives = 43/53 (81%) Frame = +1 Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 K RG+M+++AFF QTCRE HKKK+PD SV + FSKKC+ERW TMS KEK +F Sbjct: 8 KLRGKMSSHAFFGQTCREAHKKKHPDASVNLSEFSKKCSERWKTMSAKEKGKF 60 Score = 30.7 bits (66), Expect = 6.0 Identities = 15/54 (27%), Positives = 27/54 (50%) Frame = +1 Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 N P+ +A+ F R + K ++P +S+ +KK E WN + +KQ + Sbjct: 93 NAPKRTPSAFFLFCSAYRPKIKGEHPGLSI--GDVAKKLGEMWNNTAADDKQPY 144 >AF281043-1|AAK64599.1| 50|Homo sapiens high mobility group 1 protein protein. Length = 50 Score = 81.8 bits (193), Expect = 2e-15 Identities = 33/42 (78%), Positives = 39/42 (92%) Frame = +1 Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERW 717 KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERW 49 >AF255609-1|AAF71287.1| 50|Homo sapiens high mobility group protein HMG1 protein. Length = 50 Score = 81.8 bits (193), Expect = 2e-15 Identities = 33/42 (78%), Positives = 39/42 (92%) Frame = +1 Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERW 717 KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERW 49 >Z17240-1|CAA78938.1| 186|Homo sapiens HMG2B protein. Length = 186 Score = 65.3 bits (152), Expect = 2e-10 Identities = 28/37 (75%), Positives = 31/37 (83%) Frame = +1 Query: 640 REEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 REEHKKK+PD SV FA FSKKC+ERW TMS KEK +F Sbjct: 1 REEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 37 Score = 31.5 bits (68), Expect = 3.4 Identities = 17/54 (31%), Positives = 28/54 (51%) Frame = +1 Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 N P+ +A+ F R + K ++P +S+ A KK E W+ S K+KQ + Sbjct: 70 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTA--KKLGEMWSEQSAKDKQPY 121 >L79988-1|AAL77438.1| 403|Homo sapiens nuclear autoantigen protein. Length = 403 Score = 52.0 bits (119), Expect = 2e-06 Identities = 24/41 (58%), Positives = 28/41 (68%) Frame = +1 Query: 628 VQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 V C EEHKKK PD SV F+ F KKC+E W T+ KEK +F Sbjct: 219 VDPC-EEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKF 258 >AF056322-1|AAC39790.1| 879|Homo sapiens SP100-HMG nuclear autoantigen protein. Length = 879 Score = 52.0 bits (119), Expect = 2e-06 Identities = 24/41 (58%), Positives = 28/41 (68%) Frame = +1 Query: 628 VQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 V C EEHKKK PD SV F+ F KKC+E W T+ KEK +F Sbjct: 695 VDPC-EEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKF 734 >AC010149-1|AAY14879.1| 843|Homo sapiens unknown protein. Length = 843 Score = 52.0 bits (119), Expect = 2e-06 Identities = 24/41 (58%), Positives = 28/41 (68%) Frame = +1 Query: 628 VQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 V C EEHKKK PD SV F+ F KKC+E W T+ KEK +F Sbjct: 659 VDPC-EEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKF 698 >AF076675-2|AAF39781.1| 181|Homo sapiens SP100-HMG protein. Length = 181 Score = 51.6 bits (118), Expect = 3e-06 Identities = 22/36 (61%), Positives = 26/36 (72%) Frame = +1 Query: 643 EEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 EEHKKK PD SV F+ F KKC+E W T+ KEK +F Sbjct: 1 EEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKF 36 >DQ207367-1|ABB22048.1| 186|Homo sapiens HMG2-like protein protein. Length = 186 Score = 49.2 bits (112), Expect = 2e-05 Identities = 18/53 (33%), Positives = 35/53 (66%) Frame = +1 Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 KP+ +++Y F+ R + K++ P+ V F FS+KC+E+W ++S+ EK ++ Sbjct: 8 KPKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKY 60 >BC021180-1|AAH21180.1| 186|Homo sapiens high-mobility group box 4 protein. Length = 186 Score = 48.8 bits (111), Expect = 2e-05 Identities = 18/53 (33%), Positives = 34/53 (64%) Frame = +1 Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 KP+ +++Y F+ R + K++ P V F FS+KC+E+W ++S+ EK ++ Sbjct: 8 KPKANVSSYVHFLLNYRNKFKEQQPSTYVGFKEFSRKCSEKWRSISKHEKAKY 60 >AF378670-1|AAK57703.1| 26|Homo sapiens SP100 protein. Length = 26 Score = 41.9 bits (94), Expect = 0.002 Identities = 17/25 (68%), Positives = 19/25 (76%) Frame = +1 Query: 643 EEHKKKYPDVSVIFAAFSKKCAERW 717 EEHKKK PD SV F+ F KKC+E W Sbjct: 1 EEHKKKNPDASVKFSEFLKKCSETW 25 >M86737-1|AAA58660.1| 709|Homo sapiens high mobility group box protein. Length = 709 Score = 39.5 bits (88), Expect = 0.013 Identities = 19/56 (33%), Positives = 32/56 (57%) Frame = +1 Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFLR 756 N P+ M+AY ++ RE+ K +P +S+ SKK E W MS+++K+ + R Sbjct: 545 NAPKRPMSAYMLWLNASREKIKSDHPGISI--TDLSKKAGEIWKGMSKEKKEEWDR 598 >BC091486-1|AAH91486.1| 633|Homo sapiens SSRP1 protein protein. Length = 633 Score = 39.5 bits (88), Expect = 0.013 Identities = 19/56 (33%), Positives = 32/56 (57%) Frame = +1 Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFLR 756 N P+ M+AY ++ RE+ K +P +S+ SKK E W MS+++K+ + R Sbjct: 545 NAPKRPMSAYMLWLNASREKIKSDHPGISI--TDLSKKAGEIWKGMSKEKKEEWDR 598 >BC005116-1|AAH05116.1| 709|Homo sapiens structure specific recognition protein 1 protein. Length = 709 Score = 39.5 bits (88), Expect = 0.013 Identities = 19/56 (33%), Positives = 32/56 (57%) Frame = +1 Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFLR 756 N P+ M+AY ++ RE+ K +P +S+ SKK E W MS+++K+ + R Sbjct: 545 NAPKRPMSAYMLWLNASREKIKSDHPGISI--TDLSKKAGEIWKGMSKEKKEEWDR 598 >BT006716-1|AAP35362.1| 347|Homo sapiens high-mobility group 20A protein. Length = 347 Score = 37.9 bits (84), Expect = 0.040 Identities = 18/58 (31%), Positives = 30/58 (51%) Frame = +1 Query: 580 RPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFL 753 R N P+ +T Y F+ RE+ + K P+V F ++ W+ + +EKQR+L Sbjct: 98 RDSNAPKSPLTGYVRFMNERREQLRAKRPEVP--FPEITRMLGNEWSKLPPEEKQRYL 153 >BC021959-1|AAH21959.1| 347|Homo sapiens high-mobility group 20A protein. Length = 347 Score = 37.9 bits (84), Expect = 0.040 Identities = 18/58 (31%), Positives = 30/58 (51%) Frame = +1 Query: 580 RPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFL 753 R N P+ +T Y F+ RE+ + K P+V F ++ W+ + +EKQR+L Sbjct: 98 RDSNAPKSPLTGYVRFMNERREQLRAKRPEVP--FPEITRMLGNEWSKLPPEEKQRYL 153 >AL355737-1|CAB90816.1| 347|Homo sapiens HMG20A protein. Length = 347 Score = 37.9 bits (84), Expect = 0.040 Identities = 18/58 (31%), Positives = 30/58 (51%) Frame = +1 Query: 580 RPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFL 753 R N P+ +T Y F+ RE+ + K P+V F ++ W+ + +EKQR+L Sbjct: 98 RDSNAPKSPLTGYVRFMNERREQLRAKRPEVP--FPEITRMLGNEWSKLPPEEKQRYL 153 >AK223100-1|BAD96820.1| 347|Homo sapiens high-mobility group 20A variant protein. Length = 347 Score = 37.9 bits (84), Expect = 0.040 Identities = 18/58 (31%), Positives = 30/58 (51%) Frame = +1 Query: 580 RPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFL 753 R N P+ +T Y F+ RE+ + K P+V F ++ W+ + +EKQR+L Sbjct: 98 RDSNAPKSPLTGYVRFMNERREQLRAKRPEVP--FPEITRMLGNEWSKLPPEEKQRYL 153 >AK001601-1|BAA91782.1| 347|Homo sapiens protein ( Homo sapiens cDNA FLJ10739 fis, clone NT2RP3001472, weakly similar to NONHISTONE CHROMOSOMAL PROTEIN 6A. ). Length = 347 Score = 37.9 bits (84), Expect = 0.040 Identities = 18/58 (31%), Positives = 30/58 (51%) Frame = +1 Query: 580 RPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFL 753 R N P+ +T Y F+ RE+ + K P+V F ++ W+ + +EKQR+L Sbjct: 98 RDSNAPKSPLTGYVRFMNERREQLRAKRPEVP--FPEITRMLGNEWSKLPPEEKQRYL 153 >AF146222-1|AAF66706.1| 347|Homo sapiens HMG domain protein HMGX1 protein. Length = 347 Score = 37.9 bits (84), Expect = 0.040 Identities = 18/58 (31%), Positives = 30/58 (51%) Frame = +1 Query: 580 RPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFL 753 R N P+ +T Y F+ RE+ + K P+V F ++ W+ + +EKQR+L Sbjct: 98 RDSNAPKSPLTGYVRFMNERREQLRAKRPEVP--FPEITRMLGNEWSKLPPEEKQRYL 153 >BC004408-1|AAH04408.2| 317|Homo sapiens high-mobility group 20B protein. Length = 317 Score = 37.5 bits (83), Expect = 0.052 Identities = 17/55 (30%), Positives = 29/55 (52%) Frame = +1 Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFL 753 N P+ +T Y F+ RE+ + ++PD+ F +K W+ + EKQR+L Sbjct: 68 NGPKAPVTGYVRFLNERREQIRTRHPDLP--FPEITKMLGAEWSKLQPTEKQRYL 120 >BC003505-1|AAH03505.2| 317|Homo sapiens high-mobility group 20B protein. Length = 317 Score = 37.5 bits (83), Expect = 0.052 Identities = 17/55 (30%), Positives = 29/55 (52%) Frame = +1 Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFL 753 N P+ +T Y F+ RE+ + ++PD+ F +K W+ + EKQR+L Sbjct: 68 NGPKAPVTGYVRFLNERREQIRTRHPDLP--FPEITKMLGAEWSKLQPTEKQRYL 120 >BC002552-1|AAH02552.1| 317|Homo sapiens HMG20B protein protein. Length = 317 Score = 37.5 bits (83), Expect = 0.052 Identities = 17/55 (30%), Positives = 29/55 (52%) Frame = +1 Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFL 753 N P+ +T Y F+ RE+ + ++PD+ F +K W+ + EKQR+L Sbjct: 68 NGPKAPVTGYVRFLNERREQIRTRHPDLP--FPEITKMLGAEWSKLQPTEKQRYL 120 >AL355709-1|CAB90809.2| 317|Homo sapiens HMG20B protein. Length = 317 Score = 37.5 bits (83), Expect = 0.052 Identities = 17/55 (30%), Positives = 29/55 (52%) Frame = +1 Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFL 753 N P+ +T Y F+ RE+ + ++PD+ F +K W+ + EKQR+L Sbjct: 68 NGPKAPVTGYVRFLNERREQIRTRHPDLP--FPEITKMLGAEWSKLQPTEKQRYL 120 >AF331191-1|AAG60060.1| 317|Homo sapiens structural DNA-binding protein BRAF35 protein. Length = 317 Score = 37.5 bits (83), Expect = 0.052 Identities = 17/55 (30%), Positives = 29/55 (52%) Frame = +1 Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFL 753 N P+ +T Y F+ RE+ + ++PD+ F +K W+ + EKQR+L Sbjct: 68 NGPKAPVTGYVRFLNERREQIRTRHPDLP--FPEITKMLGAEWSKLQPTEKQRYL 120 >AF288679-1|AAG01174.1| 317|Homo sapiens smarce1-related protein protein. Length = 317 Score = 37.5 bits (83), Expect = 0.052 Identities = 17/55 (30%), Positives = 29/55 (52%) Frame = +1 Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFL 753 N P+ +T Y F+ RE+ + ++PD+ F +K W+ + EKQR+L Sbjct: 68 NGPKAPVTGYVRFLNERREQIRTRHPDLP--FPEITKMLGAEWSKLQPTEKQRYL 120 >AF146223-1|AAF66707.1| 317|Homo sapiens HMG domain protein HMGX2 protein. Length = 317 Score = 37.5 bits (83), Expect = 0.052 Identities = 17/55 (30%), Positives = 29/55 (52%) Frame = +1 Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFL 753 N P+ +T Y F+ RE+ + ++PD+ F +K W+ + EKQR+L Sbjct: 68 NGPKAPVTGYVRFLNERREQIRTRHPDLP--FPEITKMLGAEWSKLQPTEKQRYL 120 >BC007636-1|AAH07636.1| 464|Homo sapiens Unknown (protein for MGC:15880) protein. Length = 464 Score = 35.5 bits (78), Expect = 0.21 Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 3/69 (4%) Frame = +1 Query: 559 KARMPRSRPY---NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMS 729 KA+ P+ + N+P+ ++AYA F + + K + P S F SK A W+++ Sbjct: 189 KAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNP--SATFGDVSKIVASMWDSLG 246 Query: 730 EKEKQRFLR 756 E++KQ + R Sbjct: 247 EEQKQAYKR 255 >AL121587-3|CAI21561.1| 464|Homo sapiens chromosome 20 open reading frame 100 protein. Length = 464 Score = 35.5 bits (78), Expect = 0.21 Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 3/69 (4%) Frame = +1 Query: 559 KARMPRSRPY---NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMS 729 KA+ P+ + N+P+ ++AYA F + + K + P S F SK A W+++ Sbjct: 189 KAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNP--SATFGDVSKIVASMWDSLG 246 Query: 730 EKEKQRFLR 756 E++KQ + R Sbjct: 247 EEQKQAYKR 255 >AL034419-4|CAI42201.1| 464|Homo sapiens chromosome 20 open reading frame 100 protein. Length = 464 Score = 35.5 bits (78), Expect = 0.21 Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 3/69 (4%) Frame = +1 Query: 559 KARMPRSRPY---NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMS 729 KA+ P+ + N+P+ ++AYA F + + K + P S F SK A W+++ Sbjct: 189 KAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNP--SATFGDVSKIVASMWDSLG 246 Query: 730 EKEKQRFLR 756 E++KQ + R Sbjct: 247 EEQKQAYKR 255 >BC013689-1|AAH13689.1| 621|Homo sapiens TOX high mobility group box family member 4 protein. Length = 621 Score = 34.3 bits (75), Expect = 0.49 Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 3/69 (4%) Frame = +1 Query: 559 KARMPRSRPY---NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMS 729 K + P+ R N+P+ ++AYA F + + K + P+ + F SK A W+++ Sbjct: 208 KQKAPKKRKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNAT--FGEVSKIVASMWDSLG 265 Query: 730 EKEKQRFLR 756 E++KQ + R Sbjct: 266 EEQKQVYKR 274 >AB018280-1|BAA34457.2| 629|Homo sapiens KIAA0737 protein protein. Length = 629 Score = 34.3 bits (75), Expect = 0.49 Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 3/69 (4%) Frame = +1 Query: 559 KARMPRSRPY---NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMS 729 K + P+ R N+P+ ++AYA F + + K + P+ + F SK A W+++ Sbjct: 216 KQKAPKKRKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNAT--FGEVSKIVASMWDSLG 273 Query: 730 EKEKQRFLR 756 E++KQ + R Sbjct: 274 EEQKQVYKR 282 >U80736-1|AAB91435.1| 331|Homo sapiens CAGF9 protein. Length = 331 Score = 33.9 bits (74), Expect = 0.64 Identities = 17/56 (30%), Positives = 32/56 (57%) Frame = +1 Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFLR 756 N+P+ ++AYA F + + K + P+ + F SK A W+++ E++KQ + R Sbjct: 8 NEPQKPVSAYALFFRDTQAAIKGQNPNAT--FGEVSKIVASMWDSLGEEQKQVYKR 61 >AL121587-1|CAI21559.1| 488|Homo sapiens chromosome 20 open reading frame 100 protein. Length = 488 Score = 33.5 bits (73), Expect = 0.85 Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Frame = +1 Query: 559 KARMPRSRPY---NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMS 729 KA+ P+ + N+P+ ++AYA F + + K + P S F SK A W+++ Sbjct: 240 KAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNP--SATFGDVSKIVASMWDSLG 297 Query: 730 EKEKQ 744 E++KQ Sbjct: 298 EEQKQ 302 >AL034419-1|CAI42198.1| 488|Homo sapiens chromosome 20 open reading frame 100 protein. Length = 488 Score = 33.5 bits (73), Expect = 0.85 Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Frame = +1 Query: 559 KARMPRSRPY---NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMS 729 KA+ P+ + N+P+ ++AYA F + + K + P S F SK A W+++ Sbjct: 240 KAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNP--SATFGDVSKIVASMWDSLG 297 Query: 730 EKEKQ 744 E++KQ Sbjct: 298 EEQKQ 302 >AK055135-1|BAB70860.1| 488|Homo sapiens protein ( Homo sapiens cDNA FLJ30573 fis, clone BRAWH2006450, weakly similar to Homo sapiens CAGF9 mRNA. ). Length = 488 Score = 33.5 bits (73), Expect = 0.85 Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Frame = +1 Query: 559 KARMPRSRPY---NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMS 729 KA+ P+ + N+P+ ++AYA F + + K + P S F SK A W+++ Sbjct: 240 KAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNP--SATFGDVSKIVASMWDSLG 297 Query: 730 EKEKQ 744 E++KQ Sbjct: 298 EEQKQ 302 >BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. Length = 1022 Score = 33.1 bits (72), Expect = 1.1 Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 5/58 (8%) Frame = +2 Query: 29 KSRKRSKQST----SERYSTESSVDPTTTAAGAKS-NYSTATKSITTAVAATTESPAS 187 K RKRS+ +T S R +S D +++ ++S + S A K+ TTA+A + SPAS Sbjct: 243 KKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSPAS 300 >BC041155-1|AAH41155.1| 311|Homo sapiens SRRM2 protein protein. Length = 311 Score = 33.1 bits (72), Expect = 1.1 Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 5/58 (8%) Frame = +2 Query: 29 KSRKRSKQST----SERYSTESSVDPTTTAAGAKS-NYSTATKSITTAVAATTESPAS 187 K RKRS+ +T S R +S D +++ ++S + S A K+ TTA+A + SPAS Sbjct: 147 KKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSPAS 204 >AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein. Length = 2752 Score = 33.1 bits (72), Expect = 1.1 Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 5/58 (8%) Frame = +2 Query: 29 KSRKRSKQST----SERYSTESSVDPTTTAAGAKS-NYSTATKSITTAVAATTESPAS 187 K RKRS+ +T S R +S D +++ ++S + S A K+ TTA+A + SPAS Sbjct: 243 KKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSPAS 300 >AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein protein. Length = 956 Score = 33.1 bits (72), Expect = 1.1 Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 5/58 (8%) Frame = +2 Query: 29 KSRKRSKQST----SERYSTESSVDPTTTAAGAKS-NYSTATKSITTAVAATTESPAS 187 K RKRS+ +T S R +S D +++ ++S + S A K+ TTA+A + SPAS Sbjct: 208 KKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSPAS 265 >AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein protein. Length = 1262 Score = 33.1 bits (72), Expect = 1.1 Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 5/58 (8%) Frame = +2 Query: 29 KSRKRSKQST----SERYSTESSVDPTTTAAGAKS-NYSTATKSITTAVAATTESPAS 187 K RKRS+ +T S R +S D +++ ++S + S A K+ TTA+A + SPAS Sbjct: 33 KKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSPAS 90 >AB015644-1|BAA34957.1| 229|Homo sapiens RNA binding protein protein. Length = 229 Score = 33.1 bits (72), Expect = 1.1 Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 5/58 (8%) Frame = +2 Query: 29 KSRKRSKQST----SERYSTESSVDPTTTAAGAKS-NYSTATKSITTAVAATTESPAS 187 K RKRS+ +T S R +S D +++ ++S + S A K+ TTA+A + SPAS Sbjct: 47 KKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSPAS 104 >AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. Length = 2800 Score = 33.1 bits (72), Expect = 1.1 Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 5/58 (8%) Frame = +2 Query: 29 KSRKRSKQST----SERYSTESSVDPTTTAAGAKS-NYSTATKSITTAVAATTESPAS 187 K RKRS+ +T S R +S D +++ ++S + S A K+ TTA+A + SPAS Sbjct: 291 KKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSPAS 348 >CR456504-1|CAG30390.1| 601|Homo sapiens HMG2L1 protein. Length = 601 Score = 31.1 bits (67), Expect = 4.5 Identities = 18/56 (32%), Positives = 25/56 (44%) Frame = +1 Query: 574 RSRPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEK 741 R R + M+AY F + R +P + F SKK AE W + EK+K Sbjct: 400 RERGEKPKKKNMSAYQVFCKEYRVTIVADHPGID--FGELSKKLAEVWKQLPEKDK 453 >BC104756-1|AAI04757.1| 492|Homo sapiens HMG2L1 protein protein. Length = 492 Score = 31.1 bits (67), Expect = 4.5 Identities = 18/56 (32%), Positives = 25/56 (44%) Frame = +1 Query: 574 RSRPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEK 741 R R + M+AY F + R +P + F SKK AE W + EK+K Sbjct: 291 RERGEKPKKKNMSAYQVFCKEYRVTIVADHPGID--FGELSKKLAEVWKQLPEKDK 344 >BC104754-1|AAI04755.1| 492|Homo sapiens HMG2L1 protein protein. Length = 492 Score = 31.1 bits (67), Expect = 4.5 Identities = 18/56 (32%), Positives = 25/56 (44%) Frame = +1 Query: 574 RSRPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEK 741 R R + M+AY F + R +P + F SKK AE W + EK+K Sbjct: 291 RERGEKPKKKNMSAYQVFCKEYRVTIVADHPGID--FGELSKKLAEVWKQLPEKDK 344 >AL079310-1|CAB45240.1| 492|Homo sapiens hypothetical protein protein. Length = 492 Score = 31.1 bits (67), Expect = 4.5 Identities = 18/56 (32%), Positives = 25/56 (44%) Frame = +1 Query: 574 RSRPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEK 741 R R + M+AY F + R +P + F SKK AE W + EK+K Sbjct: 291 RERGEKPKKKNMSAYQVFCKEYRVTIVADHPGID--FGELSKKLAEVWKQLPEKDK 344 >AL008635-1|CAI21632.1| 601|Homo sapiens high-mobility group protein 2-like 1 protein. Length = 601 Score = 31.1 bits (67), Expect = 4.5 Identities = 18/56 (32%), Positives = 25/56 (44%) Frame = +1 Query: 574 RSRPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEK 741 R R + M+AY F + R +P + F SKK AE W + EK+K Sbjct: 400 RERGEKPKKKNMSAYQVFCKEYRVTIVADHPGID--FGELSKKLAEVWKQLPEKDK 453 >BC103851-1|AAI03852.1| 130|Homo sapiens HMG4L protein protein. Length = 130 Score = 30.3 bits (65), Expect = 7.9 Identities = 14/55 (25%), Positives = 27/55 (49%) Frame = +1 Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFL 753 N P+ ++ + F + K P +S+ +KK E WN +++ EKQ ++ Sbjct: 27 NAPKRPLSGFFLFCSEFCPKIKSTNPGISI--GDVAKKLGEMWNNLNDSEKQPYV 79 >BC103850-1|AAI03851.1| 130|Homo sapiens HMG4L protein protein. Length = 130 Score = 30.3 bits (65), Expect = 7.9 Identities = 14/55 (25%), Positives = 27/55 (49%) Frame = +1 Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFL 753 N P+ ++ + F + K P +S+ +KK E WN +++ EKQ ++ Sbjct: 27 NAPKRPLSGFFLFCSEFCPKIKSTNPGISI--GDVAKKLGEMWNNLNDSEKQPYV 79 >BC103849-1|AAI03850.1| 130|Homo sapiens HMG4L protein protein. Length = 130 Score = 30.3 bits (65), Expect = 7.9 Identities = 14/55 (25%), Positives = 27/55 (49%) Frame = +1 Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFL 753 N P+ ++ + F + K P +S+ +KK E WN +++ EKQ ++ Sbjct: 27 NAPKRPLSGFFLFCSEFCPKIKSTNPGISI--GDVAKKLGEMWNNLNDSEKQPYV 79 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 59,756,409 Number of Sequences: 237096 Number of extensions: 1083517 Number of successful extensions: 3516 Number of sequences better than 10.0: 82 Number of HSP's better than 10.0 without gapping: 3291 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3499 length of database: 76,859,062 effective HSP length: 89 effective length of database: 55,757,518 effective search space used: 9255747988 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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