Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1607
(767 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X62534-1|CAA44395.1| 209|Homo sapiens HMG-2 protein. 99 2e-20
M83665-1|AAA58659.1| 209|Homo sapiens high mobility group 2 pro... 99 2e-20
BT019783-1|AAV38586.1| 208|Homo sapiens high-mobility group box... 99 2e-20
BT019782-1|AAV38585.1| 209|Homo sapiens high-mobility group box... 99 2e-20
BC100019-1|AAI00020.1| 209|Homo sapiens HMGB2 protein protein. 99 2e-20
BC001063-1|AAH01063.1| 209|Homo sapiens high-mobility group box... 99 2e-20
BX537505-1|CAD97768.1| 127|Homo sapiens hypothetical protein pr... 97 5e-20
X12597-1|CAA31110.1| 215|Homo sapiens protein ( Human mRNA for ... 95 2e-19
U51677-1|AAB08987.1| 215|Homo sapiens non-histone chromatin pro... 95 2e-19
EU012027-1|ABS29271.1| 215|Homo sapiens high-mobility group box... 95 2e-19
EF157968-1|ABM47301.1| 215|Homo sapiens high mobility group box... 95 2e-19
CR456863-1|CAG33144.1| 215|Homo sapiens HMGB1 protein. 95 2e-19
BT020159-1|AAV38961.1| 215|Homo sapiens high-mobility group box... 95 2e-19
BT006940-1|AAP35586.1| 215|Homo sapiens high-mobility group box... 95 2e-19
BC141844-1|AAI41845.1| 215|Homo sapiens high-mobility group box... 95 2e-19
BC067732-1|AAH67732.1| 215|Homo sapiens high-mobility group box... 95 2e-19
BC066889-1|AAH66889.1| 215|Homo sapiens high-mobility group box... 95 2e-19
BC030981-1|AAH30981.1| 215|Homo sapiens high-mobility group box... 95 2e-19
BC003378-1|AAH03378.1| 215|Homo sapiens high-mobility group box... 95 2e-19
AY377859-1|AAQ91389.1| 215|Homo sapiens high mobility group pro... 95 2e-19
AL353648-4|CAI15606.1| 97|Homo sapiens high-mobility group box... 95 2e-19
AL353648-3|CAI15603.1| 158|Homo sapiens high-mobility group box... 95 2e-19
AL353648-2|CAI15601.1| 162|Homo sapiens high-mobility group box... 95 2e-19
AL353648-1|CAI15600.1| 215|Homo sapiens high-mobility group box... 95 2e-19
AB208998-1|BAD92235.1| 176|Homo sapiens high-mobility group box... 95 2e-19
BC070482-1|AAH70482.1| 200|Homo sapiens HMGB3 protein protein. 93 8e-19
L08048-1|AAA64970.1| 216|Homo sapiens HMG-1 protein. 93 1e-18
D63874-1|BAA09924.1| 215|Homo sapiens HMG-1 protein. 92 2e-18
L05085-1|AAC15850.1| 109|Homo sapiens non-histone chromosomal p... 91 4e-18
Y10043-1|CAA71143.1| 200|Homo sapiens high mobility group prote... 89 1e-17
AC007277-1|AAF19244.1| 191|Homo sapiens WUGSC:H_NH0244E06.1 pro... 88 4e-17
Z95115-3|CAB62951.1| 211|Homo sapiens high-mobility group (nonh... 82 2e-15
AF281043-1|AAK64599.1| 50|Homo sapiens high mobility group 1 p... 82 2e-15
AF255609-1|AAF71287.1| 50|Homo sapiens high mobility group pro... 82 2e-15
Z17240-1|CAA78938.1| 186|Homo sapiens HMG2B protein. 65 2e-10
L79988-1|AAL77438.1| 403|Homo sapiens nuclear autoantigen protein. 52 2e-06
AF056322-1|AAC39790.1| 879|Homo sapiens SP100-HMG nuclear autoa... 52 2e-06
AC010149-1|AAY14879.1| 843|Homo sapiens unknown protein. 52 2e-06
AF076675-2|AAF39781.1| 181|Homo sapiens SP100-HMG protein. 52 3e-06
DQ207367-1|ABB22048.1| 186|Homo sapiens HMG2-like protein protein. 49 2e-05
BC021180-1|AAH21180.1| 186|Homo sapiens high-mobility group box... 49 2e-05
AF378670-1|AAK57703.1| 26|Homo sapiens SP100 protein. 42 0.002
M86737-1|AAA58660.1| 709|Homo sapiens high mobility group box p... 40 0.013
BC091486-1|AAH91486.1| 633|Homo sapiens SSRP1 protein protein. 40 0.013
BC005116-1|AAH05116.1| 709|Homo sapiens structure specific reco... 40 0.013
BT006716-1|AAP35362.1| 347|Homo sapiens high-mobility group 20A... 38 0.040
BC021959-1|AAH21959.1| 347|Homo sapiens high-mobility group 20A... 38 0.040
AL355737-1|CAB90816.1| 347|Homo sapiens HMG20A protein. 38 0.040
AK223100-1|BAD96820.1| 347|Homo sapiens high-mobility group 20A... 38 0.040
AK001601-1|BAA91782.1| 347|Homo sapiens protein ( Homo sapiens ... 38 0.040
AF146222-1|AAF66706.1| 347|Homo sapiens HMG domain protein HMGX... 38 0.040
BC004408-1|AAH04408.2| 317|Homo sapiens high-mobility group 20B... 38 0.052
BC003505-1|AAH03505.2| 317|Homo sapiens high-mobility group 20B... 38 0.052
BC002552-1|AAH02552.1| 317|Homo sapiens HMG20B protein protein. 38 0.052
AL355709-1|CAB90809.2| 317|Homo sapiens HMG20B protein. 38 0.052
AF331191-1|AAG60060.1| 317|Homo sapiens structural DNA-binding ... 38 0.052
AF288679-1|AAG01174.1| 317|Homo sapiens smarce1-related protein... 38 0.052
AF146223-1|AAF66707.1| 317|Homo sapiens HMG domain protein HMGX... 38 0.052
BC007636-1|AAH07636.1| 464|Homo sapiens Unknown (protein for MG... 36 0.21
AL121587-3|CAI21561.1| 464|Homo sapiens chromosome 20 open read... 36 0.21
AL034419-4|CAI42201.1| 464|Homo sapiens chromosome 20 open read... 36 0.21
BC013689-1|AAH13689.1| 621|Homo sapiens TOX high mobility group... 34 0.49
AB018280-1|BAA34457.2| 629|Homo sapiens KIAA0737 protein protein. 34 0.49
U80736-1|AAB91435.1| 331|Homo sapiens CAGF9 protein. 34 0.64
AL121587-1|CAI21559.1| 488|Homo sapiens chromosome 20 open read... 33 0.85
AL034419-1|CAI42198.1| 488|Homo sapiens chromosome 20 open read... 33 0.85
AK055135-1|BAB70860.1| 488|Homo sapiens protein ( Homo sapiens ... 33 0.85
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 33 1.1
BC041155-1|AAH41155.1| 311|Homo sapiens SRRM2 protein protein. 33 1.1
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 33 1.1
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 33 1.1
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 33 1.1
AB015644-1|BAA34957.1| 229|Homo sapiens RNA binding protein pro... 33 1.1
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 33 1.1
CR456504-1|CAG30390.1| 601|Homo sapiens HMG2L1 protein. 31 4.5
BC104756-1|AAI04757.1| 492|Homo sapiens HMG2L1 protein protein. 31 4.5
BC104754-1|AAI04755.1| 492|Homo sapiens HMG2L1 protein protein. 31 4.5
AL079310-1|CAB45240.1| 492|Homo sapiens hypothetical protein pr... 31 4.5
AL008635-1|CAI21632.1| 601|Homo sapiens high-mobility group pro... 31 4.5
BC103851-1|AAI03852.1| 130|Homo sapiens HMG4L protein protein. 30 7.9
BC103850-1|AAI03851.1| 130|Homo sapiens HMG4L protein protein. 30 7.9
BC103849-1|AAI03850.1| 130|Homo sapiens HMG4L protein protein. 30 7.9
>X62534-1|CAA44395.1| 209|Homo sapiens HMG-2 protein.
Length = 209
Score = 99.1 bits (236), Expect = 2e-20
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = +1
Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
NKPRG+M++YAFFVQTCREEHKKK+PD SV FA FSKKC+ERW TMS KEK +F
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60
Score = 31.5 bits (68), Expect = 3.4
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +1
Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
N P+ +A+ F R + K ++P +S+ A KK E W+ S K+KQ +
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTA--KKLGEMWSEQSAKDKQPY 144
>M83665-1|AAA58659.1| 209|Homo sapiens high mobility group 2
protein protein.
Length = 209
Score = 99.1 bits (236), Expect = 2e-20
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = +1
Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
NKPRG+M++YAFFVQTCREEHKKK+PD SV FA FSKKC+ERW TMS KEK +F
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60
Score = 31.5 bits (68), Expect = 3.4
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +1
Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
N P+ +A+ F R + K ++P +S+ A KK E W+ S K+KQ +
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTA--KKLGEMWSEQSAKDKQPY 144
>BT019783-1|AAV38586.1| 208|Homo sapiens high-mobility group box 2
protein.
Length = 208
Score = 99.1 bits (236), Expect = 2e-20
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = +1
Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
NKPRG+M++YAFFVQTCREEHKKK+PD SV FA FSKKC+ERW TMS KEK +F
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60
Score = 31.5 bits (68), Expect = 3.4
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +1
Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
N P+ +A+ F R + K ++P +S+ A KK E W+ S K+KQ +
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTA--KKLGEMWSEQSAKDKQPY 144
>BT019782-1|AAV38585.1| 209|Homo sapiens high-mobility group box 2
protein.
Length = 209
Score = 99.1 bits (236), Expect = 2e-20
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = +1
Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
NKPRG+M++YAFFVQTCREEHKKK+PD SV FA FSKKC+ERW TMS KEK +F
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60
Score = 31.5 bits (68), Expect = 3.4
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +1
Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
N P+ +A+ F R + K ++P +S+ A KK E W+ S K+KQ +
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTA--KKLGEMWSEQSAKDKQPY 144
>BC100019-1|AAI00020.1| 209|Homo sapiens HMGB2 protein protein.
Length = 209
Score = 99.1 bits (236), Expect = 2e-20
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = +1
Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
NKPRG+M++YAFFVQTCREEHKKK+PD SV FA FSKKC+ERW TMS KEK +F
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60
Score = 31.5 bits (68), Expect = 3.4
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +1
Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
N P+ +A+ F R + K ++P +S+ A KK E W+ S K+KQ +
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTA--KKLGEMWSEQSAKDKQPY 144
>BC001063-1|AAH01063.1| 209|Homo sapiens high-mobility group box 2
protein.
Length = 209
Score = 99.1 bits (236), Expect = 2e-20
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = +1
Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
NKPRG+M++YAFFVQTCREEHKKK+PD SV FA FSKKC+ERW TMS KEK +F
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60
Score = 31.5 bits (68), Expect = 3.4
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +1
Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
N P+ +A+ F R + K ++P +S+ A KK E W+ S K+KQ +
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTA--KKLGEMWSEQSAKDKQPY 144
>BX537505-1|CAD97768.1| 127|Homo sapiens hypothetical protein
protein.
Length = 127
Score = 97.5 bits (232), Expect = 5e-20
Identities = 44/65 (67%), Positives = 51/65 (78%)
Frame = +1
Query: 556 NKARMPRSRPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEK 735
N RM + P KP+G+M+AYAFFVQTCREEHKKK P+V V FA FSKKC+ERW TMS K
Sbjct: 27 NTVRMAKGDP-KKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGK 85
Query: 736 EKQRF 750
EK +F
Sbjct: 86 EKSKF 90
>X12597-1|CAA31110.1| 215|Homo sapiens protein ( Human mRNA for
high mobility group-1 protein (HMG-1). ).
Length = 215
Score = 95.5 bits (227), Expect = 2e-19
Identities = 40/53 (75%), Positives = 47/53 (88%)
Frame = +1
Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60
>U51677-1|AAB08987.1| 215|Homo sapiens non-histone chromatin
protein HMG1 protein.
Length = 215
Score = 95.5 bits (227), Expect = 2e-19
Identities = 40/53 (75%), Positives = 47/53 (88%)
Frame = +1
Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60
>EU012027-1|ABS29271.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 95.5 bits (227), Expect = 2e-19
Identities = 40/53 (75%), Positives = 47/53 (88%)
Frame = +1
Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60
>EF157968-1|ABM47301.1| 215|Homo sapiens high mobility group box 1
protein protein.
Length = 215
Score = 95.5 bits (227), Expect = 2e-19
Identities = 40/53 (75%), Positives = 47/53 (88%)
Frame = +1
Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60
>CR456863-1|CAG33144.1| 215|Homo sapiens HMGB1 protein.
Length = 215
Score = 95.5 bits (227), Expect = 2e-19
Identities = 40/53 (75%), Positives = 47/53 (88%)
Frame = +1
Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60
>BT020159-1|AAV38961.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 95.5 bits (227), Expect = 2e-19
Identities = 40/53 (75%), Positives = 47/53 (88%)
Frame = +1
Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60
>BT006940-1|AAP35586.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 95.5 bits (227), Expect = 2e-19
Identities = 40/53 (75%), Positives = 47/53 (88%)
Frame = +1
Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60
>BC141844-1|AAI41845.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 95.5 bits (227), Expect = 2e-19
Identities = 40/53 (75%), Positives = 47/53 (88%)
Frame = +1
Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60
Score = 30.7 bits (66), Expect = 6.0
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +1
Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
N P+ +A+ F R + K ++P +S+ +KK E WN + +KQ +
Sbjct: 93 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSI--GDVAKKLGEMWNNTAADDKQHY 144
>BC067732-1|AAH67732.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 95.5 bits (227), Expect = 2e-19
Identities = 40/53 (75%), Positives = 47/53 (88%)
Frame = +1
Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60
>BC066889-1|AAH66889.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 95.5 bits (227), Expect = 2e-19
Identities = 40/53 (75%), Positives = 47/53 (88%)
Frame = +1
Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60
>BC030981-1|AAH30981.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 95.5 bits (227), Expect = 2e-19
Identities = 40/53 (75%), Positives = 47/53 (88%)
Frame = +1
Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60
>BC003378-1|AAH03378.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 95.5 bits (227), Expect = 2e-19
Identities = 40/53 (75%), Positives = 47/53 (88%)
Frame = +1
Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60
>AY377859-1|AAQ91389.1| 215|Homo sapiens high mobility group
protein 1 protein.
Length = 215
Score = 95.5 bits (227), Expect = 2e-19
Identities = 40/53 (75%), Positives = 47/53 (88%)
Frame = +1
Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60
>AL353648-4|CAI15606.1| 97|Homo sapiens high-mobility group box 1
protein.
Length = 97
Score = 95.5 bits (227), Expect = 2e-19
Identities = 40/53 (75%), Positives = 47/53 (88%)
Frame = +1
Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60
>AL353648-3|CAI15603.1| 158|Homo sapiens high-mobility group box 1
protein.
Length = 158
Score = 95.5 bits (227), Expect = 2e-19
Identities = 40/53 (75%), Positives = 47/53 (88%)
Frame = +1
Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60
>AL353648-2|CAI15601.1| 162|Homo sapiens high-mobility group box 1
protein.
Length = 162
Score = 95.5 bits (227), Expect = 2e-19
Identities = 40/53 (75%), Positives = 47/53 (88%)
Frame = +1
Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60
>AL353648-1|CAI15600.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 95.5 bits (227), Expect = 2e-19
Identities = 40/53 (75%), Positives = 47/53 (88%)
Frame = +1
Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60
>AB208998-1|BAD92235.1| 176|Homo sapiens high-mobility group box 1
variant protein.
Length = 176
Score = 95.5 bits (227), Expect = 2e-19
Identities = 40/53 (75%), Positives = 47/53 (88%)
Frame = +1
Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F
Sbjct: 10 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 62
>BC070482-1|AAH70482.1| 200|Homo sapiens HMGB3 protein protein.
Length = 200
Score = 93.5 bits (222), Expect = 8e-19
Identities = 40/53 (75%), Positives = 46/53 (86%)
Frame = +1
Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
KP+G+M+AYAFFVQTCREEHKKK P+V V FA FSKKC+ERW TMS KEK +F
Sbjct: 8 KPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKF 60
Score = 32.3 bits (70), Expect = 2.0
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +1
Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFL 753
N P+ + + F R + K P +S+ +KK E WN +++ EKQ ++
Sbjct: 91 NAPKRPPSGFFLFCSEFRPKIKSTNPGISI--GDVAKKLGEMWNNLNDSEKQPYI 143
>L08048-1|AAA64970.1| 216|Homo sapiens HMG-1 protein.
Length = 216
Score = 93.1 bits (221), Expect = 1e-18
Identities = 39/53 (73%), Positives = 46/53 (86%)
Frame = +1
Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
KP G+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F
Sbjct: 8 KPTGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60
>D63874-1|BAA09924.1| 215|Homo sapiens HMG-1 protein.
Length = 215
Score = 92.3 bits (219), Expect = 2e-18
Identities = 39/53 (73%), Positives = 46/53 (86%)
Frame = +1
Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
KPR +M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW TMS KEK +F
Sbjct: 8 KPRRKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60
>L05085-1|AAC15850.1| 109|Homo sapiens non-histone chromosomal
protein protein.
Length = 109
Score = 91.1 bits (216), Expect = 4e-18
Identities = 39/53 (73%), Positives = 45/53 (84%)
Frame = +1
Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
KP+G+M+AYAFFVQTCREEHKK P+V V FA FSKKC+ERW TMS KEK +F
Sbjct: 8 KPKGKMSAYAFFVQTCREEHKKXNPEVPVNFAEFSKKCSERWKTMSGKEKSKF 60
>Y10043-1|CAA71143.1| 200|Homo sapiens high mobility group protein
2a protein.
Length = 200
Score = 89.4 bits (212), Expect = 1e-17
Identities = 38/53 (71%), Positives = 45/53 (84%)
Frame = +1
Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
KP+G+ +AYAFFVQTCREEHKKK P+V V FA FSKKC+ERW T+S KEK +F
Sbjct: 8 KPKGKTSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTVSGKEKSKF 60
Score = 32.3 bits (70), Expect = 2.0
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +1
Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFL 753
N P+ + + F R + K P +S+ +KK E WN +++ EKQ ++
Sbjct: 91 NAPKRPPSGFFLFCSEFRPKIKSTNPGISI--GDVAKKLGEMWNNLNDSEKQPYI 143
>AC007277-1|AAF19244.1| 191|Homo sapiens WUGSC:H_NH0244E06.1
protein.
Length = 191
Score = 87.8 bits (208), Expect = 4e-17
Identities = 37/53 (69%), Positives = 45/53 (84%)
Frame = +1
Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
KPRG+M++YAFFVQTCREE KKK+PD SV F+ FSKKC+ERW MS K+K +F
Sbjct: 8 KPRGKMSSYAFFVQTCREECKKKHPDASVNFSEFSKKCSERWKAMSAKDKGKF 60
>Z95115-3|CAB62951.1| 211|Homo sapiens high-mobility group
(nonhistone chromosomal) protein 1-like 10 protein.
Length = 211
Score = 81.8 bits (193), Expect = 2e-15
Identities = 35/53 (66%), Positives = 43/53 (81%)
Frame = +1
Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
K RG+M+++AFF QTCRE HKKK+PD SV + FSKKC+ERW TMS KEK +F
Sbjct: 8 KLRGKMSSHAFFGQTCREAHKKKHPDASVNLSEFSKKCSERWKTMSAKEKGKF 60
Score = 30.7 bits (66), Expect = 6.0
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +1
Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
N P+ +A+ F R + K ++P +S+ +KK E WN + +KQ +
Sbjct: 93 NAPKRTPSAFFLFCSAYRPKIKGEHPGLSI--GDVAKKLGEMWNNTAADDKQPY 144
>AF281043-1|AAK64599.1| 50|Homo sapiens high mobility group 1
protein protein.
Length = 50
Score = 81.8 bits (193), Expect = 2e-15
Identities = 33/42 (78%), Positives = 39/42 (92%)
Frame = +1
Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERW 717
KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERW 49
>AF255609-1|AAF71287.1| 50|Homo sapiens high mobility group
protein HMG1 protein.
Length = 50
Score = 81.8 bits (193), Expect = 2e-15
Identities = 33/42 (78%), Positives = 39/42 (92%)
Frame = +1
Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERW 717
KPRG+M++YAFFVQTCREEHKKK+PD SV F+ FSKKC+ERW
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERW 49
>Z17240-1|CAA78938.1| 186|Homo sapiens HMG2B protein.
Length = 186
Score = 65.3 bits (152), Expect = 2e-10
Identities = 28/37 (75%), Positives = 31/37 (83%)
Frame = +1
Query: 640 REEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
REEHKKK+PD SV FA FSKKC+ERW TMS KEK +F
Sbjct: 1 REEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 37
Score = 31.5 bits (68), Expect = 3.4
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +1
Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
N P+ +A+ F R + K ++P +S+ A KK E W+ S K+KQ +
Sbjct: 70 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTA--KKLGEMWSEQSAKDKQPY 121
>L79988-1|AAL77438.1| 403|Homo sapiens nuclear autoantigen protein.
Length = 403
Score = 52.0 bits (119), Expect = 2e-06
Identities = 24/41 (58%), Positives = 28/41 (68%)
Frame = +1
Query: 628 VQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
V C EEHKKK PD SV F+ F KKC+E W T+ KEK +F
Sbjct: 219 VDPC-EEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKF 258
>AF056322-1|AAC39790.1| 879|Homo sapiens SP100-HMG nuclear
autoantigen protein.
Length = 879
Score = 52.0 bits (119), Expect = 2e-06
Identities = 24/41 (58%), Positives = 28/41 (68%)
Frame = +1
Query: 628 VQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
V C EEHKKK PD SV F+ F KKC+E W T+ KEK +F
Sbjct: 695 VDPC-EEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKF 734
>AC010149-1|AAY14879.1| 843|Homo sapiens unknown protein.
Length = 843
Score = 52.0 bits (119), Expect = 2e-06
Identities = 24/41 (58%), Positives = 28/41 (68%)
Frame = +1
Query: 628 VQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
V C EEHKKK PD SV F+ F KKC+E W T+ KEK +F
Sbjct: 659 VDPC-EEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKF 698
>AF076675-2|AAF39781.1| 181|Homo sapiens SP100-HMG protein.
Length = 181
Score = 51.6 bits (118), Expect = 3e-06
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +1
Query: 643 EEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
EEHKKK PD SV F+ F KKC+E W T+ KEK +F
Sbjct: 1 EEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKF 36
>DQ207367-1|ABB22048.1| 186|Homo sapiens HMG2-like protein protein.
Length = 186
Score = 49.2 bits (112), Expect = 2e-05
Identities = 18/53 (33%), Positives = 35/53 (66%)
Frame = +1
Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
KP+ +++Y F+ R + K++ P+ V F FS+KC+E+W ++S+ EK ++
Sbjct: 8 KPKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKY 60
>BC021180-1|AAH21180.1| 186|Homo sapiens high-mobility group box 4
protein.
Length = 186
Score = 48.8 bits (111), Expect = 2e-05
Identities = 18/53 (33%), Positives = 34/53 (64%)
Frame = +1
Query: 592 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750
KP+ +++Y F+ R + K++ P V F FS+KC+E+W ++S+ EK ++
Sbjct: 8 KPKANVSSYVHFLLNYRNKFKEQQPSTYVGFKEFSRKCSEKWRSISKHEKAKY 60
>AF378670-1|AAK57703.1| 26|Homo sapiens SP100 protein.
Length = 26
Score = 41.9 bits (94), Expect = 0.002
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1
Query: 643 EEHKKKYPDVSVIFAAFSKKCAERW 717
EEHKKK PD SV F+ F KKC+E W
Sbjct: 1 EEHKKKNPDASVKFSEFLKKCSETW 25
>M86737-1|AAA58660.1| 709|Homo sapiens high mobility group box
protein.
Length = 709
Score = 39.5 bits (88), Expect = 0.013
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = +1
Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFLR 756
N P+ M+AY ++ RE+ K +P +S+ SKK E W MS+++K+ + R
Sbjct: 545 NAPKRPMSAYMLWLNASREKIKSDHPGISI--TDLSKKAGEIWKGMSKEKKEEWDR 598
>BC091486-1|AAH91486.1| 633|Homo sapiens SSRP1 protein protein.
Length = 633
Score = 39.5 bits (88), Expect = 0.013
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = +1
Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFLR 756
N P+ M+AY ++ RE+ K +P +S+ SKK E W MS+++K+ + R
Sbjct: 545 NAPKRPMSAYMLWLNASREKIKSDHPGISI--TDLSKKAGEIWKGMSKEKKEEWDR 598
>BC005116-1|AAH05116.1| 709|Homo sapiens structure specific
recognition protein 1 protein.
Length = 709
Score = 39.5 bits (88), Expect = 0.013
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = +1
Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFLR 756
N P+ M+AY ++ RE+ K +P +S+ SKK E W MS+++K+ + R
Sbjct: 545 NAPKRPMSAYMLWLNASREKIKSDHPGISI--TDLSKKAGEIWKGMSKEKKEEWDR 598
>BT006716-1|AAP35362.1| 347|Homo sapiens high-mobility group 20A
protein.
Length = 347
Score = 37.9 bits (84), Expect = 0.040
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +1
Query: 580 RPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFL 753
R N P+ +T Y F+ RE+ + K P+V F ++ W+ + +EKQR+L
Sbjct: 98 RDSNAPKSPLTGYVRFMNERREQLRAKRPEVP--FPEITRMLGNEWSKLPPEEKQRYL 153
>BC021959-1|AAH21959.1| 347|Homo sapiens high-mobility group 20A
protein.
Length = 347
Score = 37.9 bits (84), Expect = 0.040
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +1
Query: 580 RPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFL 753
R N P+ +T Y F+ RE+ + K P+V F ++ W+ + +EKQR+L
Sbjct: 98 RDSNAPKSPLTGYVRFMNERREQLRAKRPEVP--FPEITRMLGNEWSKLPPEEKQRYL 153
>AL355737-1|CAB90816.1| 347|Homo sapiens HMG20A protein.
Length = 347
Score = 37.9 bits (84), Expect = 0.040
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +1
Query: 580 RPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFL 753
R N P+ +T Y F+ RE+ + K P+V F ++ W+ + +EKQR+L
Sbjct: 98 RDSNAPKSPLTGYVRFMNERREQLRAKRPEVP--FPEITRMLGNEWSKLPPEEKQRYL 153
>AK223100-1|BAD96820.1| 347|Homo sapiens high-mobility group 20A
variant protein.
Length = 347
Score = 37.9 bits (84), Expect = 0.040
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +1
Query: 580 RPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFL 753
R N P+ +T Y F+ RE+ + K P+V F ++ W+ + +EKQR+L
Sbjct: 98 RDSNAPKSPLTGYVRFMNERREQLRAKRPEVP--FPEITRMLGNEWSKLPPEEKQRYL 153
>AK001601-1|BAA91782.1| 347|Homo sapiens protein ( Homo sapiens
cDNA FLJ10739 fis, clone NT2RP3001472, weakly similar to
NONHISTONE CHROMOSOMAL PROTEIN 6A. ).
Length = 347
Score = 37.9 bits (84), Expect = 0.040
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +1
Query: 580 RPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFL 753
R N P+ +T Y F+ RE+ + K P+V F ++ W+ + +EKQR+L
Sbjct: 98 RDSNAPKSPLTGYVRFMNERREQLRAKRPEVP--FPEITRMLGNEWSKLPPEEKQRYL 153
>AF146222-1|AAF66706.1| 347|Homo sapiens HMG domain protein HMGX1
protein.
Length = 347
Score = 37.9 bits (84), Expect = 0.040
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +1
Query: 580 RPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFL 753
R N P+ +T Y F+ RE+ + K P+V F ++ W+ + +EKQR+L
Sbjct: 98 RDSNAPKSPLTGYVRFMNERREQLRAKRPEVP--FPEITRMLGNEWSKLPPEEKQRYL 153
>BC004408-1|AAH04408.2| 317|Homo sapiens high-mobility group 20B
protein.
Length = 317
Score = 37.5 bits (83), Expect = 0.052
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +1
Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFL 753
N P+ +T Y F+ RE+ + ++PD+ F +K W+ + EKQR+L
Sbjct: 68 NGPKAPVTGYVRFLNERREQIRTRHPDLP--FPEITKMLGAEWSKLQPTEKQRYL 120
>BC003505-1|AAH03505.2| 317|Homo sapiens high-mobility group 20B
protein.
Length = 317
Score = 37.5 bits (83), Expect = 0.052
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +1
Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFL 753
N P+ +T Y F+ RE+ + ++PD+ F +K W+ + EKQR+L
Sbjct: 68 NGPKAPVTGYVRFLNERREQIRTRHPDLP--FPEITKMLGAEWSKLQPTEKQRYL 120
>BC002552-1|AAH02552.1| 317|Homo sapiens HMG20B protein protein.
Length = 317
Score = 37.5 bits (83), Expect = 0.052
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +1
Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFL 753
N P+ +T Y F+ RE+ + ++PD+ F +K W+ + EKQR+L
Sbjct: 68 NGPKAPVTGYVRFLNERREQIRTRHPDLP--FPEITKMLGAEWSKLQPTEKQRYL 120
>AL355709-1|CAB90809.2| 317|Homo sapiens HMG20B protein.
Length = 317
Score = 37.5 bits (83), Expect = 0.052
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +1
Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFL 753
N P+ +T Y F+ RE+ + ++PD+ F +K W+ + EKQR+L
Sbjct: 68 NGPKAPVTGYVRFLNERREQIRTRHPDLP--FPEITKMLGAEWSKLQPTEKQRYL 120
>AF331191-1|AAG60060.1| 317|Homo sapiens structural DNA-binding
protein BRAF35 protein.
Length = 317
Score = 37.5 bits (83), Expect = 0.052
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +1
Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFL 753
N P+ +T Y F+ RE+ + ++PD+ F +K W+ + EKQR+L
Sbjct: 68 NGPKAPVTGYVRFLNERREQIRTRHPDLP--FPEITKMLGAEWSKLQPTEKQRYL 120
>AF288679-1|AAG01174.1| 317|Homo sapiens smarce1-related protein
protein.
Length = 317
Score = 37.5 bits (83), Expect = 0.052
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +1
Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFL 753
N P+ +T Y F+ RE+ + ++PD+ F +K W+ + EKQR+L
Sbjct: 68 NGPKAPVTGYVRFLNERREQIRTRHPDLP--FPEITKMLGAEWSKLQPTEKQRYL 120
>AF146223-1|AAF66707.1| 317|Homo sapiens HMG domain protein HMGX2
protein.
Length = 317
Score = 37.5 bits (83), Expect = 0.052
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +1
Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFL 753
N P+ +T Y F+ RE+ + ++PD+ F +K W+ + EKQR+L
Sbjct: 68 NGPKAPVTGYVRFLNERREQIRTRHPDLP--FPEITKMLGAEWSKLQPTEKQRYL 120
>BC007636-1|AAH07636.1| 464|Homo sapiens Unknown (protein for
MGC:15880) protein.
Length = 464
Score = 35.5 bits (78), Expect = 0.21
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = +1
Query: 559 KARMPRSRPY---NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMS 729
KA+ P+ + N+P+ ++AYA F + + K + P S F SK A W+++
Sbjct: 189 KAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNP--SATFGDVSKIVASMWDSLG 246
Query: 730 EKEKQRFLR 756
E++KQ + R
Sbjct: 247 EEQKQAYKR 255
>AL121587-3|CAI21561.1| 464|Homo sapiens chromosome 20 open reading
frame 100 protein.
Length = 464
Score = 35.5 bits (78), Expect = 0.21
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = +1
Query: 559 KARMPRSRPY---NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMS 729
KA+ P+ + N+P+ ++AYA F + + K + P S F SK A W+++
Sbjct: 189 KAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNP--SATFGDVSKIVASMWDSLG 246
Query: 730 EKEKQRFLR 756
E++KQ + R
Sbjct: 247 EEQKQAYKR 255
>AL034419-4|CAI42201.1| 464|Homo sapiens chromosome 20 open reading
frame 100 protein.
Length = 464
Score = 35.5 bits (78), Expect = 0.21
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = +1
Query: 559 KARMPRSRPY---NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMS 729
KA+ P+ + N+P+ ++AYA F + + K + P S F SK A W+++
Sbjct: 189 KAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNP--SATFGDVSKIVASMWDSLG 246
Query: 730 EKEKQRFLR 756
E++KQ + R
Sbjct: 247 EEQKQAYKR 255
>BC013689-1|AAH13689.1| 621|Homo sapiens TOX high mobility group
box family member 4 protein.
Length = 621
Score = 34.3 bits (75), Expect = 0.49
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = +1
Query: 559 KARMPRSRPY---NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMS 729
K + P+ R N+P+ ++AYA F + + K + P+ + F SK A W+++
Sbjct: 208 KQKAPKKRKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNAT--FGEVSKIVASMWDSLG 265
Query: 730 EKEKQRFLR 756
E++KQ + R
Sbjct: 266 EEQKQVYKR 274
>AB018280-1|BAA34457.2| 629|Homo sapiens KIAA0737 protein protein.
Length = 629
Score = 34.3 bits (75), Expect = 0.49
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = +1
Query: 559 KARMPRSRPY---NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMS 729
K + P+ R N+P+ ++AYA F + + K + P+ + F SK A W+++
Sbjct: 216 KQKAPKKRKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNAT--FGEVSKIVASMWDSLG 273
Query: 730 EKEKQRFLR 756
E++KQ + R
Sbjct: 274 EEQKQVYKR 282
>U80736-1|AAB91435.1| 331|Homo sapiens CAGF9 protein.
Length = 331
Score = 33.9 bits (74), Expect = 0.64
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = +1
Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFLR 756
N+P+ ++AYA F + + K + P+ + F SK A W+++ E++KQ + R
Sbjct: 8 NEPQKPVSAYALFFRDTQAAIKGQNPNAT--FGEVSKIVASMWDSLGEEQKQVYKR 61
>AL121587-1|CAI21559.1| 488|Homo sapiens chromosome 20 open reading
frame 100 protein.
Length = 488
Score = 33.5 bits (73), Expect = 0.85
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +1
Query: 559 KARMPRSRPY---NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMS 729
KA+ P+ + N+P+ ++AYA F + + K + P S F SK A W+++
Sbjct: 240 KAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNP--SATFGDVSKIVASMWDSLG 297
Query: 730 EKEKQ 744
E++KQ
Sbjct: 298 EEQKQ 302
>AL034419-1|CAI42198.1| 488|Homo sapiens chromosome 20 open reading
frame 100 protein.
Length = 488
Score = 33.5 bits (73), Expect = 0.85
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +1
Query: 559 KARMPRSRPY---NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMS 729
KA+ P+ + N+P+ ++AYA F + + K + P S F SK A W+++
Sbjct: 240 KAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNP--SATFGDVSKIVASMWDSLG 297
Query: 730 EKEKQ 744
E++KQ
Sbjct: 298 EEQKQ 302
>AK055135-1|BAB70860.1| 488|Homo sapiens protein ( Homo sapiens
cDNA FLJ30573 fis, clone BRAWH2006450, weakly similar to
Homo sapiens CAGF9 mRNA. ).
Length = 488
Score = 33.5 bits (73), Expect = 0.85
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +1
Query: 559 KARMPRSRPY---NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMS 729
KA+ P+ + N+P+ ++AYA F + + K + P S F SK A W+++
Sbjct: 240 KAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNP--SATFGDVSKIVASMWDSLG 297
Query: 730 EKEKQ 744
E++KQ
Sbjct: 298 EEQKQ 302
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 33.1 bits (72), Expect = 1.1
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Frame = +2
Query: 29 KSRKRSKQST----SERYSTESSVDPTTTAAGAKS-NYSTATKSITTAVAATTESPAS 187
K RKRS+ +T S R +S D +++ ++S + S A K+ TTA+A + SPAS
Sbjct: 243 KKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSPAS 300
>BC041155-1|AAH41155.1| 311|Homo sapiens SRRM2 protein protein.
Length = 311
Score = 33.1 bits (72), Expect = 1.1
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Frame = +2
Query: 29 KSRKRSKQST----SERYSTESSVDPTTTAAGAKS-NYSTATKSITTAVAATTESPAS 187
K RKRS+ +T S R +S D +++ ++S + S A K+ TTA+A + SPAS
Sbjct: 147 KKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSPAS 204
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 33.1 bits (72), Expect = 1.1
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Frame = +2
Query: 29 KSRKRSKQST----SERYSTESSVDPTTTAAGAKS-NYSTATKSITTAVAATTESPAS 187
K RKRS+ +T S R +S D +++ ++S + S A K+ TTA+A + SPAS
Sbjct: 243 KKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSPAS 300
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 33.1 bits (72), Expect = 1.1
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Frame = +2
Query: 29 KSRKRSKQST----SERYSTESSVDPTTTAAGAKS-NYSTATKSITTAVAATTESPAS 187
K RKRS+ +T S R +S D +++ ++S + S A K+ TTA+A + SPAS
Sbjct: 208 KKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSPAS 265
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 33.1 bits (72), Expect = 1.1
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Frame = +2
Query: 29 KSRKRSKQST----SERYSTESSVDPTTTAAGAKS-NYSTATKSITTAVAATTESPAS 187
K RKRS+ +T S R +S D +++ ++S + S A K+ TTA+A + SPAS
Sbjct: 33 KKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSPAS 90
>AB015644-1|BAA34957.1| 229|Homo sapiens RNA binding protein
protein.
Length = 229
Score = 33.1 bits (72), Expect = 1.1
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Frame = +2
Query: 29 KSRKRSKQST----SERYSTESSVDPTTTAAGAKS-NYSTATKSITTAVAATTESPAS 187
K RKRS+ +T S R +S D +++ ++S + S A K+ TTA+A + SPAS
Sbjct: 47 KKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSPAS 104
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 33.1 bits (72), Expect = 1.1
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Frame = +2
Query: 29 KSRKRSKQST----SERYSTESSVDPTTTAAGAKS-NYSTATKSITTAVAATTESPAS 187
K RKRS+ +T S R +S D +++ ++S + S A K+ TTA+A + SPAS
Sbjct: 291 KKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSPAS 348
>CR456504-1|CAG30390.1| 601|Homo sapiens HMG2L1 protein.
Length = 601
Score = 31.1 bits (67), Expect = 4.5
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +1
Query: 574 RSRPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEK 741
R R + M+AY F + R +P + F SKK AE W + EK+K
Sbjct: 400 RERGEKPKKKNMSAYQVFCKEYRVTIVADHPGID--FGELSKKLAEVWKQLPEKDK 453
>BC104756-1|AAI04757.1| 492|Homo sapiens HMG2L1 protein protein.
Length = 492
Score = 31.1 bits (67), Expect = 4.5
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +1
Query: 574 RSRPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEK 741
R R + M+AY F + R +P + F SKK AE W + EK+K
Sbjct: 291 RERGEKPKKKNMSAYQVFCKEYRVTIVADHPGID--FGELSKKLAEVWKQLPEKDK 344
>BC104754-1|AAI04755.1| 492|Homo sapiens HMG2L1 protein protein.
Length = 492
Score = 31.1 bits (67), Expect = 4.5
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +1
Query: 574 RSRPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEK 741
R R + M+AY F + R +P + F SKK AE W + EK+K
Sbjct: 291 RERGEKPKKKNMSAYQVFCKEYRVTIVADHPGID--FGELSKKLAEVWKQLPEKDK 344
>AL079310-1|CAB45240.1| 492|Homo sapiens hypothetical protein
protein.
Length = 492
Score = 31.1 bits (67), Expect = 4.5
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +1
Query: 574 RSRPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEK 741
R R + M+AY F + R +P + F SKK AE W + EK+K
Sbjct: 291 RERGEKPKKKNMSAYQVFCKEYRVTIVADHPGID--FGELSKKLAEVWKQLPEKDK 344
>AL008635-1|CAI21632.1| 601|Homo sapiens high-mobility group
protein 2-like 1 protein.
Length = 601
Score = 31.1 bits (67), Expect = 4.5
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +1
Query: 574 RSRPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEK 741
R R + M+AY F + R +P + F SKK AE W + EK+K
Sbjct: 400 RERGEKPKKKNMSAYQVFCKEYRVTIVADHPGID--FGELSKKLAEVWKQLPEKDK 453
>BC103851-1|AAI03852.1| 130|Homo sapiens HMG4L protein protein.
Length = 130
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +1
Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFL 753
N P+ ++ + F + K P +S+ +KK E WN +++ EKQ ++
Sbjct: 27 NAPKRPLSGFFLFCSEFCPKIKSTNPGISI--GDVAKKLGEMWNNLNDSEKQPYV 79
>BC103850-1|AAI03851.1| 130|Homo sapiens HMG4L protein protein.
Length = 130
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +1
Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFL 753
N P+ ++ + F + K P +S+ +KK E WN +++ EKQ ++
Sbjct: 27 NAPKRPLSGFFLFCSEFCPKIKSTNPGISI--GDVAKKLGEMWNNLNDSEKQPYV 79
>BC103849-1|AAI03850.1| 130|Homo sapiens HMG4L protein protein.
Length = 130
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +1
Query: 589 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFL 753
N P+ ++ + F + K P +S+ +KK E WN +++ EKQ ++
Sbjct: 27 NAPKRPLSGFFLFCSEFCPKIKSTNPGISI--GDVAKKLGEMWNNLNDSEKQPYV 79
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,756,409
Number of Sequences: 237096
Number of extensions: 1083517
Number of successful extensions: 3516
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 3291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3499
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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