BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1607 (767 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U22831-3|AAK67237.1| 234|Caenorhabditis elegans Hmg protein 1.2... 70 2e-12 U22831-2|AAK67238.1| 233|Caenorhabditis elegans Hmg protein 1.2... 70 2e-12 U22831-1|AAK20071.1| 235|Caenorhabditis elegans Hmg protein 1.2... 70 2e-12 AF056577-1|AAC78599.1| 235|Caenorhabditis elegans high mobility... 70 2e-12 AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 36 0.032 Z81529-5|CAB04296.1| 288|Caenorhabditis elegans Hypothetical pr... 33 0.22 AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 32 0.39 Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical p... 31 0.90 U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical pr... 31 0.90 Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical pr... 31 1.2 Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical pr... 31 1.2 Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical p... 31 1.2 Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical pr... 31 1.2 U64608-9|AAX88815.1| 319|Caenorhabditis elegans Egg laying defe... 31 1.2 U64608-8|AAO91671.1| 316|Caenorhabditis elegans Egg laying defe... 31 1.2 U64608-7|AAX88814.1| 422|Caenorhabditis elegans Egg laying defe... 31 1.2 U64608-6|AAB04597.2| 470|Caenorhabditis elegans Egg laying defe... 31 1.2 AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical ... 31 1.2 AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical ... 31 1.2 AF097319-1|AAD12252.1| 470|Caenorhabditis elegans Sox domain pr... 31 1.2 Z70205-3|CAD44095.1| 191|Caenorhabditis elegans Hypothetical pr... 30 1.6 Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 1.6 U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 30 1.6 Z70205-4|CAA94115.2| 528|Caenorhabditis elegans Hypothetical pr... 30 2.1 Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 29 2.8 U41014-2|AAK32945.1| 182|Caenorhabditis elegans Hypothetical pr... 29 2.8 AC024200-6|AAF35998.1| 314|Caenorhabditis elegans Hypothetical ... 29 2.8 Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 29 3.6 Z74472-5|CAA98943.1| 802|Caenorhabditis elegans Hypothetical pr... 29 3.6 U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 29 3.6 AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 29 3.6 AF125459-12|AAD12832.1| 533|Caenorhabditis elegans Hypothetical... 29 3.6 Z80215-6|CAD56562.2| 1052|Caenorhabditis elegans Hypothetical pr... 29 4.8 Z80215-5|CAB02273.3| 1049|Caenorhabditis elegans Hypothetical pr... 29 4.8 Z79598-3|CAB01865.1| 680|Caenorhabditis elegans Hypothetical pr... 29 4.8 Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 29 4.8 Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical pr... 29 4.8 U41555-9|AAB37034.1| 646|Caenorhabditis elegans Hypothetical pr... 29 4.8 U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 29 4.8 D30651-1|BAA21637.1| 646|Caenorhabditis elegans flavoprotein su... 29 4.8 AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 29 4.8 AJ242473-1|CAB43345.1| 680|Caenorhabditis elegans SYM-1 protein... 29 4.8 Z83219-7|CAB05698.2| 473|Caenorhabditis elegans Hypothetical pr... 28 6.4 Z81076-4|CAB03053.1| 172|Caenorhabditis elegans Hypothetical pr... 28 6.4 Z80217-10|CAB02296.2| 473|Caenorhabditis elegans Hypothetical p... 28 6.4 Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 28 6.4 Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 28 6.4 U41109-1|ABC48251.1| 248|Caenorhabditis elegans Hypothetical pr... 28 6.4 AF101318-8|AAC69343.2| 342|Caenorhabditis elegans Hypothetical ... 28 6.4 AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 28 6.4 Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 28 8.4 U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 28 8.4 AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 28 8.4 >U22831-3|AAK67237.1| 234|Caenorhabditis elegans Hmg protein 1.2, isoform b protein. Length = 234 Score = 69.7 bits (163), Expect = 2e-12 Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 2/59 (3%) Frame = +1 Query: 580 RPYNKP--RGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 R KP RG+ + Y FFV+ C EEHKKKYP+ +V SKKC+E+W TM + EK+RF Sbjct: 37 RDMGKPPVRGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRF 95 >U22831-2|AAK67238.1| 233|Caenorhabditis elegans Hmg protein 1.2, isoform c protein. Length = 233 Score = 69.7 bits (163), Expect = 2e-12 Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 2/59 (3%) Frame = +1 Query: 580 RPYNKP--RGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 R KP RG+ + Y FFV+ C EEHKKKYP+ +V SKKC+E+W TM + EK+RF Sbjct: 38 RDMGKPPVRGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRF 96 >U22831-1|AAK20071.1| 235|Caenorhabditis elegans Hmg protein 1.2, isoform a protein. Length = 235 Score = 69.7 bits (163), Expect = 2e-12 Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 2/59 (3%) Frame = +1 Query: 580 RPYNKP--RGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 R KP RG+ + Y FFV+ C EEHKKKYP+ +V SKKC+E+W TM + EK+RF Sbjct: 38 RDMGKPPVRGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRF 96 >AF056577-1|AAC78599.1| 235|Caenorhabditis elegans high mobility group protein 1.2 protein. Length = 235 Score = 69.7 bits (163), Expect = 2e-12 Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 2/59 (3%) Frame = +1 Query: 580 RPYNKP--RGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 R KP RG+ + Y FFV+ C EEHKKKYP+ +V SKKC+E+W TM + EK+RF Sbjct: 38 RDMGKPPVRGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRF 96 >AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical protein Y8A9A.2 protein. Length = 1360 Score = 35.9 bits (79), Expect = 0.032 Identities = 17/52 (32%), Positives = 31/52 (59%) Frame = +2 Query: 23 SVKSRKRSKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTES 178 + +S S ST+ +TES+ + T+T+ + + ST+T + +T +TTES Sbjct: 218 TTESTSTSTDSTTTESTTESTTESTSTSTDSTTTESTSTSTDSTTTESTTES 269 Score = 31.5 bits (68), Expect = 0.68 Identities = 16/60 (26%), Positives = 34/60 (56%) Frame = +2 Query: 23 SVKSRKRSKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATAE 202 + +S S ++++ +TES+ + TT + ++ ST T+S +T+ +TT + +T E Sbjct: 214 TTESTTESTSTSTDSTTTESTTESTTESTSTSTD-STTTESTSTSTDSTTTESTTESTTE 272 Score = 30.3 bits (65), Expect = 1.6 Identities = 20/46 (43%), Positives = 29/46 (63%) Frame = +2 Query: 50 QSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPAS 187 +ST+E ST +S D TTT + + S ST T+S T + TTES ++ Sbjct: 236 ESTTE--STSTSTDSTTTESTSTSTDSTTTESTTES---TTESTST 276 Score = 28.7 bits (61), Expect = 4.8 Identities = 13/36 (36%), Positives = 20/36 (55%) Frame = +2 Query: 71 STESSVDPTTTAAGAKSNYSTATKSITTAVAATTES 178 +T S+ TTT + ST+T + +T +TTES Sbjct: 182 TTTSTTSSTTTTTATSTTESTSTSTDSTTTESTTES 217 Score = 27.9 bits (59), Expect = 8.4 Identities = 19/58 (32%), Positives = 27/58 (46%) Frame = +2 Query: 23 SVKSRKRSKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFAT 196 S S + +TS ST +S D TTT + +S T + T+ + TTES T Sbjct: 185 STTSSTTTTTATSTTESTSTSTDSTTTESTTES---TTESTSTSTDSTTTESTTESTT 239 >Z81529-5|CAB04296.1| 288|Caenorhabditis elegans Hypothetical protein F35E8.7 protein. Length = 288 Score = 33.1 bits (72), Expect = 0.22 Identities = 21/61 (34%), Positives = 29/61 (47%) Frame = +2 Query: 11 VVAESVKSRKRSKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASF 190 V A K+ KR + ST + PTTT A A + A ++TT A TT + A+ Sbjct: 179 VNANCRKTCKRCTSGPTATTSTAAPAAPTTTVAPAVVTTTAAPAAVTTTAAVTTTTVAAA 238 Query: 191 A 193 A Sbjct: 239 A 239 >AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical protein H02F09.3 protein. Length = 1275 Score = 32.3 bits (70), Expect = 0.39 Identities = 18/52 (34%), Positives = 24/52 (46%) Frame = +2 Query: 44 SKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATA 199 ++QST T S PTT A GA + + S + T S +S ATA Sbjct: 484 TQQSTKPTIGTSMSSGPTTVAPGASTESTVLQSSTPSGTTVTLPSGSSTATA 535 Score = 31.5 bits (68), Expect = 0.68 Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%) Frame = +2 Query: 44 SKQSTSERYSTESSVDPTTTAAGAK-SNYSTATKSITTAVAATTESPASFATAEPI 208 S ST E ESSV + + G+ ++ STA++S + V+A+TES S ++ I Sbjct: 1135 STGSTGESTILESSVSTVSVSTGSTITDGSTASRSSVSTVSASTESTVSGGSSASI 1190 >Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical protein D1086.6 protein. Length = 282 Score = 31.1 bits (67), Expect = 0.90 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%) Frame = +2 Query: 5 ILVVAESVKSRKRSKQSTSERY--STESSVDPTTTAAGAKSNYSTATKSITTAVAATTES 178 ++ +ES S+ + ST+ S+ ++ +PTT+ +T T S TT TT+ Sbjct: 138 VVDTSESSTSQSTTTPSTTTTIIVSSTTTTNPTTSTTPTTPTTTTPTTSTTTTARGTTDI 197 Query: 179 PASFATAE 202 PA + E Sbjct: 198 PAPPSVVE 205 >U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical protein ZC449.5 protein. Length = 493 Score = 31.1 bits (67), Expect = 0.90 Identities = 18/62 (29%), Positives = 29/62 (46%) Frame = +2 Query: 11 VVAESVKSRKRSKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASF 190 V E ++ K ++ ST E STE+S + TTT++ + + TT A T + Sbjct: 174 VSVEEEQTVKSTEASTEEEKSTEASEEATTTSSETSETTEESEEEETTTKPAKTHKSSKT 233 Query: 191 AT 196 T Sbjct: 234 TT 235 >Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical protein T06D8.1b protein. Length = 3653 Score = 30.7 bits (66), Expect = 1.2 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Frame = +2 Query: 44 SKQSTSERYSTESSVDPTTTAAGAK-SNYSTATKSITTAVAATTESPASFATAEPI 208 S + T+ TE S + TTT+A + S T T ++ +TTE+PA F T I Sbjct: 2846 SSEETTTSAVTEGSGEETTTSAVTEGSGEETTTSAVPEGENSTTEAPA-FVTGSEI 2900 >Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical protein T06D8.1a protein. Length = 3719 Score = 30.7 bits (66), Expect = 1.2 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Frame = +2 Query: 44 SKQSTSERYSTESSVDPTTTAAGAK-SNYSTATKSITTAVAATTESPASFATAEPI 208 S + T+ TE S + TTT+A + S T T ++ +TTE+PA F T I Sbjct: 2846 SSEETTTSAVTEGSGEETTTSAVTEGSGEETTTSAVPEGENSTTEAPA-FVTGSEI 2900 >Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical protein T06D8.1b protein. Length = 3653 Score = 30.7 bits (66), Expect = 1.2 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Frame = +2 Query: 44 SKQSTSERYSTESSVDPTTTAAGAK-SNYSTATKSITTAVAATTESPASFATAEPI 208 S + T+ TE S + TTT+A + S T T ++ +TTE+PA F T I Sbjct: 2846 SSEETTTSAVTEGSGEETTTSAVTEGSGEETTTSAVPEGENSTTEAPA-FVTGSEI 2900 >Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical protein T06D8.1a protein. Length = 3719 Score = 30.7 bits (66), Expect = 1.2 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Frame = +2 Query: 44 SKQSTSERYSTESSVDPTTTAAGAK-SNYSTATKSITTAVAATTESPASFATAEPI 208 S + T+ TE S + TTT+A + S T T ++ +TTE+PA F T I Sbjct: 2846 SSEETTTSAVTEGSGEETTTSAVTEGSGEETTTSAVPEGENSTTEAPA-FVTGSEI 2900 >U64608-9|AAX88815.1| 319|Caenorhabditis elegans Egg laying defective protein 13,isoform d protein. Length = 319 Score = 30.7 bits (66), Expect = 1.2 Identities = 18/60 (30%), Positives = 29/60 (48%) Frame = +1 Query: 571 PRSRPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 P+++ N + M A+ + + R + K YPD+ + SK RW MS EKQ + Sbjct: 170 PQAKSPNHIKRPMNAFMVWARDERRKILKAYPDMHN--SNISKILGSRWKGMSNSEKQPY 227 >U64608-8|AAO91671.1| 316|Caenorhabditis elegans Egg laying defective protein 13,isoform b protein. Length = 316 Score = 30.7 bits (66), Expect = 1.2 Identities = 18/60 (30%), Positives = 29/60 (48%) Frame = +1 Query: 571 PRSRPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 P+++ N + M A+ + + R + K YPD+ + SK RW MS EKQ + Sbjct: 167 PQAKSPNHIKRPMNAFMVWARDERRKILKAYPDMHN--SNISKILGSRWKGMSNSEKQPY 224 >U64608-7|AAX88814.1| 422|Caenorhabditis elegans Egg laying defective protein 13,isoform c protein. Length = 422 Score = 30.7 bits (66), Expect = 1.2 Identities = 18/60 (30%), Positives = 29/60 (48%) Frame = +1 Query: 571 PRSRPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 P+++ N + M A+ + + R + K YPD+ + SK RW MS EKQ + Sbjct: 273 PQAKSPNHIKRPMNAFMVWARDERRKILKAYPDMHN--SNISKILGSRWKGMSNSEKQPY 330 >U64608-6|AAB04597.2| 470|Caenorhabditis elegans Egg laying defective protein 13,isoform a protein. Length = 470 Score = 30.7 bits (66), Expect = 1.2 Identities = 18/60 (30%), Positives = 29/60 (48%) Frame = +1 Query: 571 PRSRPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 P+++ N + M A+ + + R + K YPD+ + SK RW MS EKQ + Sbjct: 321 PQAKSPNHIKRPMNAFMVWARDERRKILKAYPDMHN--SNISKILGSRWKGMSNSEKQPY 378 >AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical protein T06D8.1b protein. Length = 3653 Score = 30.7 bits (66), Expect = 1.2 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Frame = +2 Query: 44 SKQSTSERYSTESSVDPTTTAAGAK-SNYSTATKSITTAVAATTESPASFATAEPI 208 S + T+ TE S + TTT+A + S T T ++ +TTE+PA F T I Sbjct: 2846 SSEETTTSAVTEGSGEETTTSAVTEGSGEETTTSAVPEGENSTTEAPA-FVTGSEI 2900 >AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical protein T06D8.1a protein. Length = 3719 Score = 30.7 bits (66), Expect = 1.2 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Frame = +2 Query: 44 SKQSTSERYSTESSVDPTTTAAGAK-SNYSTATKSITTAVAATTESPASFATAEPI 208 S + T+ TE S + TTT+A + S T T ++ +TTE+PA F T I Sbjct: 2846 SSEETTTSAVTEGSGEETTTSAVTEGSGEETTTSAVPEGENSTTEAPA-FVTGSEI 2900 >AF097319-1|AAD12252.1| 470|Caenorhabditis elegans Sox domain protein COG-2 protein. Length = 470 Score = 30.7 bits (66), Expect = 1.2 Identities = 18/60 (30%), Positives = 29/60 (48%) Frame = +1 Query: 571 PRSRPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRF 750 P+++ N + M A+ + + R + K YPD+ + SK RW MS EKQ + Sbjct: 321 PQAKSPNHIKRPMNAFMVWARDERRKILKAYPDMHN--SNISKILGSRWKGMSNSEKQPY 378 >Z70205-3|CAD44095.1| 191|Caenorhabditis elegans Hypothetical protein C11H1.8 protein. Length = 191 Score = 30.3 bits (65), Expect = 1.6 Identities = 16/45 (35%), Positives = 24/45 (53%) Frame = +2 Query: 32 SRKRSKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAA 166 SR+ SK STS +T+SS+ TTA ++ T + +AA Sbjct: 99 SRRLSKPSTSSTRATQSSMTNGTTATQTVPHFEVPTAQVAKLLAA 143 >Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical protein T24B8.4 protein. Length = 866 Score = 30.3 bits (65), Expect = 1.6 Identities = 25/62 (40%), Positives = 37/62 (59%) Frame = +2 Query: 14 VAESVKSRKRSKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFA 193 VA+S KSRK+S ++T S +S TTT+ ST+TK TT+ ++T SP+ A Sbjct: 653 VAKS-KSRKKSLKNTP---SVPTST-ITTTSTTTNKPTSTSTKQ-TTSSSSTEHSPSPMA 706 Query: 194 TA 199 T+ Sbjct: 707 TS 708 >U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter than wild-typeprotein 6 protein. Length = 1254 Score = 30.3 bits (65), Expect = 1.6 Identities = 16/44 (36%), Positives = 25/44 (56%) Frame = +2 Query: 56 TSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPAS 187 T+E+ +T+ TTT K+ T T+ TT+ +ATTE+ S Sbjct: 813 TTEKSTTQEETTTTTTTT-EKTTSKTTTEKPTTSESATTETTTS 855 Score = 29.5 bits (63), Expect = 2.8 Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 2/55 (3%) Frame = +2 Query: 44 SKQSTSERYSTESSVDPTTTAAGAKSNYS--TATKSITTAVAATTESPASFATAE 202 ++ +TSE +TES+ T++A +S+ + T T S T+ T+ES A+F T E Sbjct: 850 TETTTSEPSTTESTTVDTSSATTEESSTAAETTTTSAETSETTTSES-AAFITGE 903 >Z70205-4|CAA94115.2| 528|Caenorhabditis elegans Hypothetical protein C11H1.5 protein. Length = 528 Score = 29.9 bits (64), Expect = 2.1 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 3/46 (6%) Frame = +2 Query: 71 STESSVDPTTTAAGAKSNYSTA---TKSITTAVAATTESPASFATA 199 STESS+D TT + ST T + T +A+T S S+ATA Sbjct: 327 STESSIDFTTATESTSTPTSTTSDITSTTTAPTSASTYSTDSWATA 372 Score = 27.9 bits (59), Expect = 8.4 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = +2 Query: 50 QSTSERYSTESSVDPTTTAAGAKSNYST 133 +STS ST S + TTTA + S YST Sbjct: 339 ESTSTPTSTTSDITSTTTAPTSASTYST 366 >Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical protein C30H6.11 protein. Length = 460 Score = 29.5 bits (63), Expect = 2.8 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = +2 Query: 53 STSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPAS 187 +T+ +T ++V TTT + +T T + TT TT +PA+ Sbjct: 205 TTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPAT 249 Score = 28.7 bits (61), Expect = 4.8 Identities = 15/48 (31%), Positives = 22/48 (45%) Frame = +2 Query: 53 STSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFAT 196 +T+ T ++ PTTT + +T T TT ATT S + T Sbjct: 211 TTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTT 258 Score = 27.9 bits (59), Expect = 8.4 Identities = 14/51 (27%), Positives = 23/51 (45%) Frame = +2 Query: 53 STSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATAEP 205 +T+ T ++ PTTT + +T T + T TTE+ + T P Sbjct: 75 TTTPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTP 125 >U41014-2|AAK32945.1| 182|Caenorhabditis elegans Hypothetical protein C06G1.2 protein. Length = 182 Score = 29.5 bits (63), Expect = 2.8 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = +2 Query: 50 QSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATT 172 ++T+E +T ++V+ TTT A + + T + TT ATT Sbjct: 80 ETTTEAETTTTTVESTTTTTEATTTEAATTTTTTTEEPATT 120 >AC024200-6|AAF35998.1| 314|Caenorhabditis elegans Hypothetical protein Y71F9AL.9 protein. Length = 314 Score = 29.5 bits (63), Expect = 2.8 Identities = 20/68 (29%), Positives = 34/68 (50%) Frame = +2 Query: 5 ILVVAESVKSRKRSKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPA 184 + V A K K K T+ +T+S+ P AA A + + A+ S+T + AA + Sbjct: 66 VSVTAAKKKKNKSKKTETAAPETTQSAPAPAK-AAPAPTVAAPASSSVTKSAAAPKPVVS 124 Query: 185 SFATAEPI 208 + A A+P+ Sbjct: 125 APAPADPL 132 >Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein W01F3.3 protein. Length = 2175 Score = 29.1 bits (62), Expect = 3.6 Identities = 19/52 (36%), Positives = 28/52 (53%) Frame = +2 Query: 53 STSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATAEPI 208 +T+ER S ++ TTT A + ST T+ T ATTE+P + T E + Sbjct: 291 TTTERMSPSTTKTSTTTTAKPTTTRSTTTQRPQTV--ATTEAPTT-TTVEDV 339 Score = 27.9 bits (59), Expect = 8.4 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 6/56 (10%) Frame = +2 Query: 53 STSERYSTESSVDP-TTTAAGAKSNYSTATKSITTAVAATTES-----PASFATAE 202 +T E +TE++++ TTT S +T T + TTA TT S P + AT E Sbjct: 274 TTEEVTTTETTIEAQTTTTTERMSPSTTKTSTTTTAKPTTTRSTTTQRPQTVATTE 329 >Z74472-5|CAA98943.1| 802|Caenorhabditis elegans Hypothetical protein F23H12.5 protein. Length = 802 Score = 29.1 bits (62), Expect = 3.6 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Frame = +2 Query: 50 QSTSERYSTES-SVDPTTTAAGAKSNYSTATKSITTAVAATTES 178 +ST E ST S S TTT + + +T + TT + TTES Sbjct: 198 KSTEEPTSTPSTSTSTTTTTTTSTTTTTTEAPTTTTTIKTTTES 241 >U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical protein T19D12.1 protein. Length = 1844 Score = 29.1 bits (62), Expect = 3.6 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = +2 Query: 74 TESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATAEP 205 T +S PT + + + ST T S +T A +T SP++ ++ P Sbjct: 492 TSTSNQPTPSTSNPTTPKSTVTASPSTTGATSTASPSTITSSAP 535 Score = 28.3 bits (60), Expect = 6.4 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 3/54 (5%) Frame = +2 Query: 53 STSERYSTESSVDPTTTAAGAKSNYSTATKSI---TTAVAATTESPASFATAEP 205 +TS ST S+ T A S +T + S +TAV++TT SP++ + P Sbjct: 800 TTSGAASTTGSITSTQQATSTSSVITTGSTSAPQSSTAVSSTTTSPSTTTGSTP 853 >AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical protein Y53C10A.10 protein. Length = 1582 Score = 29.1 bits (62), Expect = 3.6 Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 4/54 (7%) Frame = +2 Query: 44 SKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSI----TTAVAATTESPASFA 193 S TSE+YS+ S TTT S ST T S A A+TE+P S A Sbjct: 763 SVSRTSEQYSSSSPSSDTTT-MDVTSTVSTTTSSTFIAKPQATTASTENPESAA 815 Score = 28.7 bits (61), Expect = 4.8 Identities = 15/45 (33%), Positives = 27/45 (60%) Frame = +2 Query: 53 STSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPAS 187 ST++ ++ S+ TTA + ST+T S+TT++A+T+ S Sbjct: 563 STTDLATSSSTSVFNTTARSSSLPGSTSTMSVTTSIASTSPETTS 607 >AF125459-12|AAD12832.1| 533|Caenorhabditis elegans Hypothetical protein Y25C1A.4 protein. Length = 533 Score = 29.1 bits (62), Expect = 3.6 Identities = 16/37 (43%), Positives = 23/37 (62%) Frame = +2 Query: 89 DPTTTAAGAKSNYSTATKSITTAVAATTESPASFATA 199 DPTTTA + ST+T + TT VA+T+ + +TA Sbjct: 23 DPTTTATSTTTVPSTSTVT-TTTVASTSSGSTTASTA 58 >Z80215-6|CAD56562.2| 1052|Caenorhabditis elegans Hypothetical protein C36B1.8b protein. Length = 1052 Score = 28.7 bits (61), Expect = 4.8 Identities = 15/46 (32%), Positives = 24/46 (52%) Frame = +2 Query: 50 QSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPAS 187 Q++S+ +S T + +N ST+T SIT+ TT P+S Sbjct: 76 QNSSQIGQNSNSSHSVTNDNTSSNNASTSTSSITSTTTTTTTVPSS 121 >Z80215-5|CAB02273.3| 1049|Caenorhabditis elegans Hypothetical protein C36B1.8a protein. Length = 1049 Score = 28.7 bits (61), Expect = 4.8 Identities = 15/46 (32%), Positives = 24/46 (52%) Frame = +2 Query: 50 QSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPAS 187 Q++S+ +S T + +N ST+T SIT+ TT P+S Sbjct: 76 QNSSQIGQNSNSSHSVTNDNTSSNNASTSTSSITSTTTTTTTVPSS 121 >Z79598-3|CAB01865.1| 680|Caenorhabditis elegans Hypothetical protein C44H4.3 protein. Length = 680 Score = 28.7 bits (61), Expect = 4.8 Identities = 15/51 (29%), Positives = 28/51 (54%) Frame = +2 Query: 53 STSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATAEP 205 +T+ +T +++ PTTT K + T+ +TT V + ++ A+ T EP Sbjct: 464 TTTTTTTTTTTLAPTTTTEEEKEETTETTEKVTT-VGKSKKTKATTTTEEP 513 >Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical protein R07E3.6 protein. Length = 927 Score = 28.7 bits (61), Expect = 4.8 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%) Frame = +2 Query: 26 VKSRKRSKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITT--AVAATTESPASFATA 199 +K+ K + ST+ T ++ + TT + +T + TT + TT+ P + T Sbjct: 307 IKTTKVTPTSTTTEIPTTTTTEEATTTTEEITTTTTKAPTTTTTQSTTTTTQLPTTTTTT 366 Query: 200 EP 205 EP Sbjct: 367 EP 368 >Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical protein F58A4.1 protein. Length = 254 Score = 28.7 bits (61), Expect = 4.8 Identities = 18/51 (35%), Positives = 28/51 (54%) Frame = +2 Query: 44 SKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFAT 196 S STS ST +S +T+ + + S + T+S TT A +T + +S AT Sbjct: 95 SSPSTSTSTSTSTST--STSTSRSTSTVTPTTRSSTTTTATSTPTSSSKAT 143 >U41555-9|AAB37034.1| 646|Caenorhabditis elegans Hypothetical protein C03G5.1 protein. Length = 646 Score = 28.7 bits (61), Expect = 4.8 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 3/41 (7%) Frame = -1 Query: 704 HFFENAANITLTSGY---FFLCSSRHVCTKNA*AVMRPRGL 591 H F + + T GY FF C+S H CT + A+ G+ Sbjct: 226 HRFRSKNTVLATGGYGRAFFSCTSAHTCTGDGTALTARAGI 266 >U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical protein F31D5.4 protein. Length = 989 Score = 28.7 bits (61), Expect = 4.8 Identities = 15/51 (29%), Positives = 25/51 (49%) Frame = +2 Query: 20 ESVKSRKRSKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATT 172 E + + + +STS STE+S T+T + T TT +A+T+ Sbjct: 207 EEIDTSSSTSRSTSTPSSTEASSTVTSTTTARTTTTMIPTTPTTTTIASTS 257 >D30651-1|BAA21637.1| 646|Caenorhabditis elegans flavoprotein subunit of complex II protein. Length = 646 Score = 28.7 bits (61), Expect = 4.8 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 3/41 (7%) Frame = -1 Query: 704 HFFENAANITLTSGY---FFLCSSRHVCTKNA*AVMRPRGL 591 H F + + T GY FF C+S H CT + A+ G+ Sbjct: 226 HRFRSKNTVLATGGYGRAFFSCTSAHTCTGDGTALTARAGI 266 >AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like protein MTH-2 protein. Length = 971 Score = 28.7 bits (61), Expect = 4.8 Identities = 15/51 (29%), Positives = 25/51 (49%) Frame = +2 Query: 20 ESVKSRKRSKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATT 172 E + + + +STS STE+S T+T + T TT +A+T+ Sbjct: 189 EEIDTSSSTSRSTSTPSSTEASSTVTSTTTARTTTTMIPTTPTTTTIASTS 239 >AJ242473-1|CAB43345.1| 680|Caenorhabditis elegans SYM-1 protein protein. Length = 680 Score = 28.7 bits (61), Expect = 4.8 Identities = 15/51 (29%), Positives = 28/51 (54%) Frame = +2 Query: 53 STSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATAEP 205 +T+ +T +++ PTTT K + T+ +TT V + ++ A+ T EP Sbjct: 464 TTTTTTTTTTTLAPTTTTEEEKEETTETTEKVTT-VGKSKKTKATTTTEEP 513 >Z83219-7|CAB05698.2| 473|Caenorhabditis elegans Hypothetical protein C31C9.1a protein. Length = 473 Score = 28.3 bits (60), Expect = 6.4 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +2 Query: 95 TTTAAGAKSNYSTATKSITTAVAATTESPASFATAEPIF 211 TTT G S + A ++TT TT SP++ + +F Sbjct: 426 TTTTPGTPSTAAPAAPTVTTTTPGTTTSPSAHLSLLSMF 464 >Z81076-4|CAB03053.1| 172|Caenorhabditis elegans Hypothetical protein F35C5.4 protein. Length = 172 Score = 28.3 bits (60), Expect = 6.4 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +2 Query: 50 QSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATAEPI 208 QSTSER T SV P +T ++ +T + ++ + +P + AT PI Sbjct: 48 QSTSER--TSRSVSPDSTPVRVTTSTLLSTVPTSQDISGVSTAPTTKATLPPI 98 >Z80217-10|CAB02296.2| 473|Caenorhabditis elegans Hypothetical protein C31C9.1a protein. Length = 473 Score = 28.3 bits (60), Expect = 6.4 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +2 Query: 95 TTTAAGAKSNYSTATKSITTAVAATTESPASFATAEPIF 211 TTT G S + A ++TT TT SP++ + +F Sbjct: 426 TTTTPGTPSTAAPAAPTVTTTTPGTTTSPSAHLSLLSMF 464 >Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical protein ZK945.9 protein. Length = 3178 Score = 28.3 bits (60), Expect = 6.4 Identities = 17/44 (38%), Positives = 25/44 (56%) Frame = +2 Query: 56 TSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPAS 187 TS S+ + PT+T + + S ST T S TTA + +T P+S Sbjct: 463 TSSSSSSTTVTTPTSTESTSTSPSSTVTTS-TTAPSTSTTGPSS 505 >Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical protein ZK945.9 protein. Length = 3178 Score = 28.3 bits (60), Expect = 6.4 Identities = 17/44 (38%), Positives = 25/44 (56%) Frame = +2 Query: 56 TSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPAS 187 TS S+ + PT+T + + S ST T S TTA + +T P+S Sbjct: 463 TSSSSSSTTVTTPTSTESTSTSPSSTVTTS-TTAPSTSTTGPSS 505 >U41109-1|ABC48251.1| 248|Caenorhabditis elegans Hypothetical protein F52E1.5 protein. Length = 248 Score = 28.3 bits (60), Expect = 6.4 Identities = 17/46 (36%), Positives = 23/46 (50%) Frame = +2 Query: 71 STESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATAEPI 208 ST S TTT +S +T T + TTA +TT S T +P+ Sbjct: 77 STTSPKPITTTETTTRSTTTTTTTTTTTAAPSTTTSTVKI-TPKPL 121 >AF101318-8|AAC69343.2| 342|Caenorhabditis elegans Hypothetical protein Y73C8C.2 protein. Length = 342 Score = 28.3 bits (60), Expect = 6.4 Identities = 18/55 (32%), Positives = 27/55 (49%) Frame = +2 Query: 14 VAESVKSRKRSKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTES 178 VAE+VK+ + + + + S DP+ T A S S T +I+T TT S Sbjct: 123 VAENVKNGRWQTRDDQDELAFVCSYDPSLTTTTAPST-SLPTSTISTTKPTTTTS 176 >AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical protein Y51B11A.1 protein. Length = 1079 Score = 28.3 bits (60), Expect = 6.4 Identities = 15/59 (25%), Positives = 28/59 (47%) Frame = +2 Query: 20 ESVKSRKRSKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFAT 196 E+ + S +T + +T ++ + T+T + S T + T +TESP+S T Sbjct: 197 ETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTESPSSSTT 255 >Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical protein Y49E10.10 protein. Length = 425 Score = 27.9 bits (59), Expect = 8.4 Identities = 18/55 (32%), Positives = 24/55 (43%) Frame = +2 Query: 41 RSKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATAEP 205 + K T + Y+T S+V P T + T TTA TTE+P T P Sbjct: 134 KPKPQTGDPYATNSTVKPATAPVTPE-----PTVKNTTAAEPTTEAPPPPTTKAP 183 >U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical protein T09D3.3 protein. Length = 592 Score = 27.9 bits (59), Expect = 8.4 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Frame = +2 Query: 44 SKQSTSERYSTESSVDPTTTAAGAKSNYSTATK-SITTAVAATTESPASFATAEPIF 211 S +T+ +T V TTT + Y+T+T S TT + TT +P PI+ Sbjct: 463 SSSTTTTTTTTPVPVTSTTTEP-TTTTYTTSTSTSTTTTLPPTTSTPKIVVNLTPIY 518 >AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical protein Y43F8C.16 protein. Length = 370 Score = 27.9 bits (59), Expect = 8.4 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 3/64 (4%) Frame = +2 Query: 23 SVKSRKRSKQSTSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPA---SFA 193 S S S S + ++ PTTT+ + + T +ITT+ SP+ S Sbjct: 151 STTSITTSTLSPPSTVQSTTTAKPTTTSTITPTTSADPTSTITTSTTPNPSSPSTVQSTT 210 Query: 194 TAEP 205 TAEP Sbjct: 211 TAEP 214 Score = 27.9 bits (59), Expect = 8.4 Identities = 18/50 (36%), Positives = 26/50 (52%) Frame = +2 Query: 53 STSERYSTESSVDPTTTAAGAKSNYSTATKSITTAVAATTESPASFATAE 202 ST + S T T+ G+ + ST+T TT + TT P+S +TAE Sbjct: 271 STMSTITLTSDRTSTITSTGSSNPPSTSTVPSTTT-STTTPKPSSPSTAE 319 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 9,860,323 Number of Sequences: 27780 Number of extensions: 170796 Number of successful extensions: 1050 Number of sequences better than 10.0: 53 Number of HSP's better than 10.0 without gapping: 859 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1041 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1840614650 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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