Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1606X
         (431 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    24   0.71 
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   2.9  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    21   5.0  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    21   5.0  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    21   6.6  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   6.6  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   6.6  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   6.6  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   6.6  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    20   8.8  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    20   8.8  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 23.8 bits (49), Expect = 0.71
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +3

Query: 330 IVTNWDDMAKIWHHTVYNELRVVPEEHPVLLT 425
           +VT+W +  +I++     +L V     PV+LT
Sbjct: 158 VVTDWVNFERIYYKLTKKKLSVFFGNKPVILT 189


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -3

Query: 330 FRVAMDYLRVRIPLLLCASSPTYESSVPYRPSRPD 226
           FR  +D    R+P      SP+  SS P  P  P+
Sbjct: 265 FRQPLDLYNFRVPQHQVLQSPSSTSSSP-EPRSPE 298


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 203 LDRGKAPPSGRDGRYGTEDS 262
           LDRGK  P G++ +    D+
Sbjct: 49  LDRGKCSPDGQELKNNLADA 68


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 203 LDRGKAPPSGRDGRYGTEDS 262
           LDRGK  P G++ +    D+
Sbjct: 49  LDRGKCSPDGQELKNNLADA 68


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -3

Query: 201 GTRREEHHHLRNRPGTYR 148
           G R+  HH ++N+P  ++
Sbjct: 82  GVRKVLHHLIKNKPNWWQ 99


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 5/25 (20%)
 Frame = -3

Query: 219 AFPRSRG-----TRREEHHHLRNRP 160
           +FP S G     + +  HHHL+ RP
Sbjct: 38  SFPLSLGMSPYASSQHHHHHLQARP 62


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = +3

Query: 375 VYNELRVVPEEHPVLLTE 428
           VY   + +P+++P++ TE
Sbjct: 63  VYYHHQTIPQDNPIINTE 80


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = +3

Query: 375 VYNELRVVPEEHPVLLTE 428
           VY   + +P+++P++ TE
Sbjct: 63  VYYHHQTIPQDNPIINTE 80


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = +3

Query: 375 VYNELRVVPEEHPVLLTE 428
           VY   + +P+++P++ TE
Sbjct: 63  VYYHHQTIPQDNPIINTE 80


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 372 TVYNELRVVPEEHPVLLTEA 431
           T+  E R V ++H +LLT A
Sbjct: 163 TLIKEFREVWDQHGLLLTAA 182


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +2

Query: 20  VVQTITKLCNSKLIYLFIIELFN*KLIQDVRRR 118
           V+Q++       L+Y F I  F   L+Q ++RR
Sbjct: 559 VLQSLWASPTCDLMYEFQIFTFLMSLLQSIKRR 591


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,039
Number of Sequences: 336
Number of extensions: 2387
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9565283
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)