Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1606X
(431 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 171 2e-43
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 167 4e-42
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 167 4e-42
SB_56| Best HMM Match : Actin (HMM E-Value=0) 165 1e-41
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 164 3e-41
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 118 2e-27
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 4e-09
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 53 9e-08
SB_54| Best HMM Match : Actin (HMM E-Value=0) 52 2e-07
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 45 2e-05
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 41 4e-04
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.019
SB_2820| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 29 1.2
SB_59022| Best HMM Match : Pkinase_Tyr (HMM E-Value=2.4e-13) 29 1.6
SB_11513| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_37708| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.8
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 28 2.8
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 28 3.8
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 28 3.8
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_40293| Best HMM Match : Phage_X (HMM E-Value=4.1) 28 3.8
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 28 3.8
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 28 3.8
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 28 3.8
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_15831| Best HMM Match : Collagen (HMM E-Value=0.11) 27 5.0
SB_35006| Best HMM Match : PT (HMM E-Value=3.4) 27 6.6
SB_48765| Best HMM Match : A1pp (HMM E-Value=3.5e-34) 27 6.6
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_13459| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_10933| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_29053| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 27 8.7
SB_3115| Best HMM Match : AAA (HMM E-Value=0) 27 8.7
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 171 bits (416), Expect = 2e-43
Identities = 80/109 (73%), Positives = 86/109 (78%)
Frame = +3
Query: 105 MCDEEVAALVVVNGSGMCQDGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQRTRT*ETRHR 284
MCD++VAALVV NGSGMC+ GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ+ +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 285 AKEVS*PSNSPSRHGIVTNWDDMAKIWHHTVYNELRVVPEEHPVLLTEA 431
+K P HGIVTNWDDM KIWHHT YNELRV PEEHPVLLTEA
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 109
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 167 bits (405), Expect = 4e-42
Identities = 79/109 (72%), Positives = 85/109 (77%)
Frame = +3
Query: 105 MCDEEVAALVVVNGSGMCQDGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQRTRT*ETRHR 284
M D+E+AALVV NGSGMC+ GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ+ +
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 285 AKEVS*PSNSPSRHGIVTNWDDMAKIWHHTVYNELRVVPEEHPVLLTEA 431
+K P HGIVTNWDDM KIWHHT YNELRV PEEHPVLLTEA
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 109
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 167 bits (405), Expect = 4e-42
Identities = 77/109 (70%), Positives = 85/109 (77%)
Frame = +3
Query: 105 MCDEEVAALVVVNGSGMCQDGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQRTRT*ETRHR 284
M D+++AALV+ NGSGMC+ GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ+ +
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 285 AKEVS*PSNSPSRHGIVTNWDDMAKIWHHTVYNELRVVPEEHPVLLTEA 431
+K P HGIVTNWDDM KIWHHT YNELRV PEEHPVLLTEA
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 109
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 165 bits (401), Expect = 1e-41
Identities = 78/107 (72%), Positives = 84/107 (78%)
Frame = +3
Query: 111 DEEVAALVVVNGSGMCQDGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQRTRT*ETRHRAK 290
++EVAALVV NGSGMC+ GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ+ ++K
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 291 EVS*PSNSPSRHGIVTNWDDMAKIWHHTVYNELRVVPEEHPVLLTEA 431
P HGIVTNWDDM KIWHHT YNELRV PEEHPVLLTEA
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 108
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 164 bits (398), Expect = 3e-41
Identities = 77/107 (71%), Positives = 84/107 (78%)
Frame = +3
Query: 111 DEEVAALVVVNGSGMCQDGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQRTRT*ETRHRAK 290
+++VAALVV NGSGMC+ GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ+ ++K
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 291 EVS*PSNSPSRHGIVTNWDDMAKIWHHTVYNELRVVPEEHPVLLTEA 431
P HGIVTNWDDM KIWHHT YNELRV PEEHPVLLTEA
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 108
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 118 bits (284), Expect = 2e-27
Identities = 57/88 (64%), Positives = 64/88 (72%)
Frame = +3
Query: 111 DEEVAALVVVNGSGMCQDGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQRTRT*ETRHRAK 290
D++VAALV+ NGSGMC+ GFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ+ ++K
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 291 EVS*PSNSPSRHGIVTNWDDMAKIWHHT 374
P HGIVTNWDDM KI T
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIMFET 89
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 57.6 bits (133), Expect = 4e-09
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Frame = +3
Query: 123 AALVVVNGSGMCQDGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQRTRT*ETRHRAKEVS* 302
+ +V NG+G + G+AG + P +FPS+VGRP + + A ++
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 303 --PSNSPSRHGIVTNWDDMAKIWHHTV-YNELRVVPEEHPVLLTE 428
N P +GIV NWDDM +W +T +++ + P VLLTE
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTE 111
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 53.2 bits (122), Expect = 9e-08
Identities = 25/39 (64%), Positives = 28/39 (71%)
Frame = +3
Query: 114 EEVAALVVVNGSGMCQDGFAGDDAPRAVFPSIVGRPRHQ 230
E LV+ GS M + GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 52.0 bits (119), Expect = 2e-07
Identities = 20/34 (58%), Positives = 28/34 (82%)
Frame = +3
Query: 129 LVVVNGSGMCQDGFAGDDAPRAVFPSIVGRPRHQ 230
+V+ NGSG C+ G + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
Score = 31.1 bits (67), Expect = 0.40
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 357 KIWHHTVYNELRVVPEEHPVLLTEA 431
K+W H +++LRV E+ PVLLTEA
Sbjct: 2130 KMWEHA-FDQLRVRGEDFPVLLTEA 2153
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 45.2 bits (102), Expect = 2e-05
Identities = 19/49 (38%), Positives = 31/49 (63%)
Frame = +3
Query: 99 FKMCDEEVAALVVVNGSGMCQDGFAGDDAPRAVFPSIVGRPRHQGVMVG 245
FK+ A+V+ NG G+ + GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 41.1 bits (92), Expect = 4e-04
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +3
Query: 315 PSRHGIVTNWDDMAKIWHHTVYNELRVVPEEHPVLL 422
P RH IV +WD M + W ++ LR PE+H LL
Sbjct: 301 PIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 35.5 bits (78), Expect = 0.019
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = -1
Query: 227 MAGPSHDRGEHGARSIITCETVLAHTGAI 141
MA + D GE+G+ SI++ ET LAHTGAI
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAI 29
>SB_2820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1140
Score = 30.7 bits (66), Expect = 0.53
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = -3
Query: 231 PDGGAFPRSRGTRREEHHHLR---NRPGTYRSH 142
PD FP S G E +H++ NRPGTY+ H
Sbjct: 822 PDEEIFPSSIGKGEEGCYHVKFIPNRPGTYKVH 854
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.5 bits (63), Expect = 1.2
Identities = 22/90 (24%), Positives = 43/90 (47%)
Frame = +3
Query: 117 EVAALVVVNGSGMCQDGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQRTRT*ETRHRAKEV 296
++A LV+ G+ + GFA + APR++ P+ + + + + + +G + + V
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSERRKLFIGDQIEECKDYSALFYV 290
Query: 297 S*PSNSPSRHGIVTNWDDMAKIWHHTVYNE 386
P + G + NWD +IW +T E
Sbjct: 291 L-----PFQKGFLVNWDVEKQIWDYTFGKE 315
>SB_59022| Best HMM Match : Pkinase_Tyr (HMM E-Value=2.4e-13)
Length = 751
Score = 29.1 bits (62), Expect = 1.6
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +1
Query: 256 GLVRRRRGTEQKRYPDPQIVHRDTESS--LTGMTWR 357
G +R+ RG E YPDP+I + + SS L W+
Sbjct: 656 GYLRKSRGEEDSYYPDPEIKPKTSLSSQQLVRFAWQ 691
>SB_11513| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 113
Score = 28.7 bits (61), Expect = 2.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 256 GLVRRRRGTEQKRYPDPQIVHRDTESS 336
G +R+ RG E YPDP+I + + SS
Sbjct: 17 GYLRKSRGEEDSYYPDPEIKPKTSLSS 43
>SB_37708| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 28.3 bits (60), Expect = 2.8
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +1
Query: 256 GLVRRRRGTEQKRYPDPQIVHRDTESS--LTGMTWR 357
G +R+ RG E YPDP+I + + SS L W+
Sbjct: 992 GYLRKSRGEEDGYYPDPEIKPKTSLSSQQLVRFAWQ 1027
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 28.3 bits (60), Expect = 2.8
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 293 LFCSVPRLLRTSPLSHTDHHALMAGPSHDRGEHGARSIITCETVLAHT 150
L C +++ LSH + H M D +HG RS +CET L T
Sbjct: 213 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 27.9 bits (59), Expect = 3.8
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 293 LFCSVPRLLRTSPLSHTDHHALMAGPSHDRGEHGARSIITCETVLAHT 150
L C +++ LSH + H M D +HG RS +CET L T
Sbjct: 408 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 27.9 bits (59), Expect = 3.8
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 202 GNTARGASSPAKPSWHIPEPLTTT 131
GNT R PAKPS ++P P + T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 27.9 bits (59), Expect = 3.8
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 293 LFCSVPRLLRTSPLSHTDHHALMAGPSHDRGEHGARSIITCETVLAHT 150
L C +++ LSH + H M D +HG RS +CET L T
Sbjct: 271 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 27.9 bits (59), Expect = 3.8
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 293 LFCSVPRLLRTSPLSHTDHHALMAGPSHDRGEHGARSIITCETVLAHT 150
L C +++ LSH + H M D +HG RS +CET L T
Sbjct: 249 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 27.9 bits (59), Expect = 3.8
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 202 GNTARGASSPAKPSWHIPEPLTTT 131
GNT R PAKP+ IP P T T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_40293| Best HMM Match : Phage_X (HMM E-Value=4.1)
Length = 104
Score = 27.9 bits (59), Expect = 3.8
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +1
Query: 220 PAIRA*WSVWDRGLVRRRRGTEQKRYPDPQIVHRDTESSLTGMT 351
PAI+A W W GL + + +RY +V+ LTG T
Sbjct: 25 PAIQADWHHWKDGLRFMKHKSSTERYRKKVLVYIGMLDELTGNT 68
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 27.9 bits (59), Expect = 3.8
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 293 LFCSVPRLLRTSPLSHTDHHALMAGPSHDRGEHGARSIITCETVLAHT 150
L C +++ LSH + H M D +HG RS +CET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 27.9 bits (59), Expect = 3.8
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 293 LFCSVPRLLRTSPLSHTDHHALMAGPSHDRGEHGARSIITCETVLAHT 150
L C +++ LSH + H M D +HG RS +CET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 27.9 bits (59), Expect = 3.8
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +3
Query: 312 SPSRHGIVTNWDDMAKIWHHTVYNELRVVPEEHPVLLTEA 431
+P + G++ +WD KI + ++ HP+L++EA
Sbjct: 2 TPIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEA 41
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 27.9 bits (59), Expect = 3.8
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 293 LFCSVPRLLRTSPLSHTDHHALMAGPSHDRGEHGARSIITCETVLAHT 150
L C +++ LSH + H M D +HG RS +CET L T
Sbjct: 173 LTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 27.9 bits (59), Expect = 3.8
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 293 LFCSVPRLLRTSPLSHTDHHALMAGPSHDRGEHGARSIITCETVLAHT 150
L C +++ LSH + H M D +HG RS +CET L T
Sbjct: 125 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_15831| Best HMM Match : Collagen (HMM E-Value=0.11)
Length = 153
Score = 27.5 bits (58), Expect = 5.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 224 PSGRDGRYGTEDSYVGDEAQSKRG 295
P GRDG G +D+ GD+A + G
Sbjct: 39 PDGRDGTDGGDDADEGDDADGRDG 62
>SB_35006| Best HMM Match : PT (HMM E-Value=3.4)
Length = 325
Score = 27.1 bits (57), Expect = 6.6
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -3
Query: 303 VRIPLLLCASSPTYESSVPYRPSRP 229
+++ LLL +SSP + S+VP P P
Sbjct: 279 IKLNLLLLSSSPMFLSAVPIAPHTP 303
>SB_48765| Best HMM Match : A1pp (HMM E-Value=3.5e-34)
Length = 354
Score = 27.1 bits (57), Expect = 6.6
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -3
Query: 273 SPTYESSVPYRPSRPDGGAFPRS-RGTRREE 184
SPT + V PSR GGA P+ RG R++E
Sbjct: 273 SPTADKQVADPPSRLLGGARPKEFRGHRKDE 303
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 26.6 bits (56), Expect = 8.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 202 GNTARGASSPAKPSWHIPEPLTTT 131
GNT R PAKP+ ++P P + T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_13459| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 395
Score = 26.6 bits (56), Expect = 8.7
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = -3
Query: 321 AMDYLRVRIPLLLCASSPTYESSVPYRPSRPDGGAFPRSRGTRREEHH 178
A+D +IP LCAS ++ ++ + GA P G + H
Sbjct: 216 AVDQRETQIPAALCASQENTQTEDSHQKGKSSNGAIP--HGNEKTNDH 261
>SB_10933| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 472
Score = 26.6 bits (56), Expect = 8.7
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = -3
Query: 273 SPTYESSVPYRPSRPDGGAFPRSRGTRREEHHHLRNRP 160
S Y S PYR P GA P R HL++ P
Sbjct: 416 STPYRGSTPYRGPTPYHGATPYRRAAPGARIPHLQSPP 453
>SB_29053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 26.6 bits (56), Expect = 8.7
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -3
Query: 381 CRRYDAKSSPCHPS**RFRVAMDYLRVRIPLLLCASSPTYESSVP 247
C + + CHP FR+ DY+R R+ ++ +S + VP
Sbjct: 240 CSVLVVRGNDCHPM---FRIQDDYIRARLDVIKQHASEYFYHEVP 281
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 26.6 bits (56), Expect = 8.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 202 GNTARGASSPAKPSWHIPEPLTTT 131
GNT R PAKP+ ++P P + T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_3115| Best HMM Match : AAA (HMM E-Value=0)
Length = 913
Score = 26.6 bits (56), Expect = 8.7
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 321 RHGIVTNWDDMAKIWHHT 374
R G+V + + + K+WHHT
Sbjct: 424 RGGVVEHTEPLLKVWHHT 441
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,287,103
Number of Sequences: 59808
Number of extensions: 350914
Number of successful extensions: 967
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 822495283
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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