Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1606X
(431 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 149 1e-36
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 149 1e-36
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 148 1e-36
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 148 1e-36
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 148 2e-36
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 148 2e-36
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 143 4e-35
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 143 4e-35
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 143 4e-35
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 142 1e-34
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 108 1e-24
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 76 9e-15
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 76 9e-15
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 73 8e-14
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 62 1e-10
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 50 9e-07
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 38 0.003
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 37 0.005
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 31 0.25
At5g40990.1 68418.m04983 GDSL-motif lipase/hydrolase family prot... 30 0.78
At2g20950.4 68415.m02474 expressed protein 29 1.0
At2g20950.3 68415.m02473 expressed protein 29 1.0
At2g20950.2 68415.m02472 expressed protein 29 1.0
At2g20950.1 68415.m02471 expressed protein 29 1.0
At1g53990.1 68414.m06151 GDSL-motif lipase/hydrolase family prot... 29 1.0
At4g37000.1 68417.m05242 accelerated cell death 2 (ACD2) identic... 29 1.4
At1g71850.1 68414.m08303 expressed protein ; expression supporte... 29 1.8
At3g58650.1 68416.m06537 expressed protein 28 2.4
At2g38430.1 68415.m04720 expressed protein 28 3.1
At4g14140.1 68417.m02181 DNA (cytosine-5-)-methyltransferase (ME... 27 5.5
At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to uclacy... 27 5.5
At3g18370.1 68416.m02336 C2 domain-containing protein contains P... 27 5.5
At5g65560.1 68418.m08249 pentatricopeptide (PPR) repeat-containi... 27 7.2
At3g51540.1 68416.m05644 expressed protein mucin 5AC, Homo sapie... 27 7.2
At1g77080.5 68414.m08973 MADS-box protein AGL27-II (AGL27) / MAD... 27 7.2
At1g77080.4 68414.m08976 MADS-box protein AGL27-II (AGL27) / MAD... 27 7.2
At1g77080.3 68414.m08974 MADS-box protein AGL27-II (AGL27) / MAD... 27 7.2
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 26 9.6
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 26 9.6
At1g10100.1 68414.m01139 hypothetical protein 26 9.6
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 149 bits (360), Expect = 1e-36
Identities = 70/106 (66%), Positives = 78/106 (73%)
Frame = +3
Query: 114 EEVAALVVVNGSGMCQDGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQRTRT*ETRHRAKE 293
E++ LV NG+GM + GFAGDDAPRAVFPSIVGRPRH GVMVGMGQ+ ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 294 VS*PSNSPSRHGIVTNWDDMAKIWHHTVYNELRVVPEEHPVLLTEA 431
P HGIV+NWDDM KIWHHT YNELRV PEEHPVLLTEA
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 110
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 149 bits (360), Expect = 1e-36
Identities = 70/106 (66%), Positives = 78/106 (73%)
Frame = +3
Query: 114 EEVAALVVVNGSGMCQDGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQRTRT*ETRHRAKE 293
E++ LV NG+GM + GFAGDDAPRAVFPSIVGRPRH GVMVGMGQ+ ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 294 VS*PSNSPSRHGIVTNWDDMAKIWHHTVYNELRVVPEEHPVLLTEA 431
P HGIV+NWDDM KIWHHT YNELRV PEEHPVLLTEA
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 110
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 148 bits (359), Expect = 1e-36
Identities = 70/106 (66%), Positives = 77/106 (72%)
Frame = +3
Query: 114 EEVAALVVVNGSGMCQDGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQRTRT*ETRHRAKE 293
E++ LV NG+GM + GFAGDDAPRAVFPSIVGRPRH GVMVGMGQ+ ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 294 VS*PSNSPSRHGIVTNWDDMAKIWHHTVYNELRVVPEEHPVLLTEA 431
P HGIV NWDDM KIWHHT YNELRV PEEHPVLLTEA
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 110
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 148 bits (359), Expect = 1e-36
Identities = 70/106 (66%), Positives = 77/106 (72%)
Frame = +3
Query: 114 EEVAALVVVNGSGMCQDGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQRTRT*ETRHRAKE 293
E++ LV NG+GM + GFAGDDAPRAVFPSIVGRPRH GVMVGMGQ+ ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 294 VS*PSNSPSRHGIVTNWDDMAKIWHHTVYNELRVVPEEHPVLLTEA 431
P HGIV NWDDM KIWHHT YNELRV PEEHPVLLTEA
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 110
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 148 bits (358), Expect = 2e-36
Identities = 69/106 (65%), Positives = 77/106 (72%)
Frame = +3
Query: 114 EEVAALVVVNGSGMCQDGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQRTRT*ETRHRAKE 293
E++ LV NG+GM + GFAGDDAPRAVFPSIVGRPRH GVMVGMGQ+ ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 294 VS*PSNSPSRHGIVTNWDDMAKIWHHTVYNELRVVPEEHPVLLTEA 431
P HGIV NWDDM KIWHHT YNELRV PEEHP+LLTEA
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEA 110
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 148 bits (358), Expect = 2e-36
Identities = 69/106 (65%), Positives = 77/106 (72%)
Frame = +3
Query: 114 EEVAALVVVNGSGMCQDGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQRTRT*ETRHRAKE 293
E++ LV NG+GM + GFAGDDAPRAVFPSIVGRPRH GVMVGMGQ+ ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 294 VS*PSNSPSRHGIVTNWDDMAKIWHHTVYNELRVVPEEHPVLLTEA 431
P HGIV NWDDM KIWHHT YNELRV PEEHP+LLTEA
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEA 110
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 143 bits (347), Expect = 4e-35
Identities = 64/106 (60%), Positives = 77/106 (72%)
Frame = +3
Query: 114 EEVAALVVVNGSGMCQDGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQRTRT*ETRHRAKE 293
+++ +V NG+GM + GFAGDDAPRAVFPS+VGRPRH GVMVGM Q+ ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 294 VS*PSNSPSRHGIVTNWDDMAKIWHHTVYNELRVVPEEHPVLLTEA 431
P HG+V+NWDDM KIWHHT YNELR+ PEEHPVLLTEA
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEA 110
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 143 bits (347), Expect = 4e-35
Identities = 64/106 (60%), Positives = 77/106 (72%)
Frame = +3
Query: 114 EEVAALVVVNGSGMCQDGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQRTRT*ETRHRAKE 293
+++ +V NG+GM + GFAGDDAPRAVFPS+VGRPRH GVMVGM Q+ ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 294 VS*PSNSPSRHGIVTNWDDMAKIWHHTVYNELRVVPEEHPVLLTEA 431
P HG+V+NWDDM KIWHHT YNELR+ PEEHPVLLTEA
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEA 110
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 143 bits (347), Expect = 4e-35
Identities = 64/106 (60%), Positives = 77/106 (72%)
Frame = +3
Query: 114 EEVAALVVVNGSGMCQDGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQRTRT*ETRHRAKE 293
+++ +V NG+GM + GFAGDDAPRAVFPS+VGRPRH GVMVGM Q+ ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 294 VS*PSNSPSRHGIVTNWDDMAKIWHHTVYNELRVVPEEHPVLLTEA 431
P HG+V+NWDDM KIWHHT YNELR+ PEEHPVLLTEA
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEA 110
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 142 bits (343), Expect = 1e-34
Identities = 64/106 (60%), Positives = 78/106 (73%)
Frame = +3
Query: 114 EEVAALVVVNGSGMCQDGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQRTRT*ETRHRAKE 293
+E A+V NG+GM + GFAGDDAPRAVFPS+VGRPRH+GVMVGM ++ +A+
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 294 VS*PSNSPSRHGIVTNWDDMAKIWHHTVYNELRVVPEEHPVLLTEA 431
P HG+V+NWDDM KIWHHT YNELR+ PEEHP+LLTEA
Sbjct: 66 GILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEA 111
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 108 bits (260), Expect = 1e-24
Identities = 55/102 (53%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
Frame = +3
Query: 129 LVVVNGSGMCQDGFAGDDAPRAVFPSIVGRPRHQGVMVGMG-QRTRT*ETRHRAKEVS*P 305
+V G GM Q GFAGD+AP+ VFP +VGRPR G+ + E H +++
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDIL-T 57
Query: 306 SNSPSRHGIVTNWDDMAKIWHHTVYNELRVVPEEHPVLLTEA 431
P HGIV NWDDM KIWH+T YNELRV PEEHPVLLTEA
Sbjct: 58 LKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEA 99
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 76.2 bits (179), Expect = 9e-15
Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Frame = +3
Query: 129 LVVVNGSGMCQDGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQRTRT*ETRHRAKEV--S* 302
+V NG+G + GFAG++ P +VFP +VGRP + M Q+ + E+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66
Query: 303 PSNSPSRHGIVTNWDDMAKIWHHTVYNELRVVPEEHPVLLTE 428
N P +GIV NWDDM +W H YNEL++ P + +LLT+
Sbjct: 67 DINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTD 108
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 76.2 bits (179), Expect = 9e-15
Identities = 30/39 (76%), Positives = 34/39 (87%)
Frame = +3
Query: 315 PSRHGIVTNWDDMAKIWHHTVYNELRVVPEEHPVLLTEA 431
P HG+V+NWDDM KIW+HT Y+ELRV PEEHPVLLTEA
Sbjct: 27 PMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEA 65
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 257 DSYVGDEAQSKRGILTL 307
D +VGD+A+++ GILTL
Sbjct: 8 DLFVGDDAEARSGILTL 24
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 72.9 bits (171), Expect = 8e-14
Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 17/122 (13%)
Frame = +3
Query: 114 EEVAALVVVNGSGMCQDGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQRTRT*ETRHRAKE 293
+EV+A+VV GS C+ G+AG+DAP+AVFPS+VG G+ + T T + + KE
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANT-TEDAKESDKE 63
Query: 294 V--------S*PSN---------SPSRHGIVTNWDDMAKIWHHTVYNELRVVPEEHPVLL 422
S N SP++ GIVT+WD + +W H N L + P EHP+LL
Sbjct: 64 KGKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLL 123
Query: 423 TE 428
E
Sbjct: 124 AE 125
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 62.5 bits (145), Expect = 1e-10
Identities = 43/127 (33%), Positives = 61/127 (48%), Gaps = 22/127 (17%)
Frame = +3
Query: 114 EEVAALVVVNGSGMCQDGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQRTRT*ETRHRAKE 293
+EV+A+VV GS C+ G+AG+DAP+AVFPS++G M T+T +K
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKT 64
Query: 294 VS*PSNS----------------------PSRHGIVTNWDDMAKIWHHTVYNELRVVPEE 407
S S P + GIV++WD + IW H + L + P E
Sbjct: 65 ESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTE 124
Query: 408 HPVLLTE 428
HP+LL E
Sbjct: 125 HPMLLAE 131
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 49.6 bits (113), Expect = 9e-07
Identities = 37/121 (30%), Positives = 54/121 (44%), Gaps = 19/121 (15%)
Frame = +3
Query: 126 ALVVVNGSGMCQDGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQRTRT*ETRHRA------ 287
A+V+ NG+G + GFAG+ P + P++V + T +T+H A
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVA-VNESFLNQSKSSSKATWQTQHNAGVAADL 66
Query: 288 -----KEVS*PSNS--------PSRHGIVTNWDDMAKIWHHTVYNELRVVPEEHPVLLTE 428
E S S P HG V +WD M + W ++N LR PE+H LLTE
Sbjct: 67 DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTE 126
Query: 429 A 431
+
Sbjct: 127 S 127
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 37.9 bits (84), Expect = 0.003
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +3
Query: 129 LVVVNGSGMCQDGFAGDDAPRAVFPSIVGRPRHQ 230
+V+ NG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 37.1 bits (82), Expect = 0.005
Identities = 26/101 (25%), Positives = 41/101 (40%)
Frame = +3
Query: 129 LVVVNGSGMCQDGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQRTRT*ETRHRAKEVS*PS 308
+V+ NG G+ + G G+ P V P+ + +P + T + S
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTTLSD---EIDLTSAAV 61
Query: 309 NSPSRHGIVTNWDDMAKIWHHTVYNELRVVPEEHPVLLTEA 431
P G + N D +IW H + L + P +LLTEA
Sbjct: 62 RRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEA 102
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 31.5 bits (68), Expect = 0.25
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = -2
Query: 289 FALCLVSYVRVL-CPIPTITP*WRGLPTIEGNTARGASSPAKPSWHIPEPLTTTNAATSS 113
+ + + Y+ + P P I P RGL +G T+ +SSPA+P +P ++T + TS+
Sbjct: 276 YYMATLPYISAIGIPTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At5g40990.1 68418.m04983 GDSL-motif lipase/hydrolase family protein
similar to lipase [Arabidopsis thaliana] GI:1145627;
contains Pfam profile PF00657: Lipase/Acylhydrolase with
GDSL-like motif
Length = 374
Score = 29.9 bits (64), Expect = 0.78
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 1 VSLGSLRCTDNNEAVQ*QVNLFIYNRTI 84
+S+GS+ C DNN V Q LF++ ++
Sbjct: 18 ISIGSINCIDNNNLVTNQSALFVFGDSV 45
>At2g20950.4 68415.m02474 expressed protein
Length = 530
Score = 29.5 bits (63), Expect = 1.0
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 270 PTYESSVPYRPSRPDGGAFPRSRGT 196
P Y S P RP PD PRS G+
Sbjct: 84 PVYRYSTPERPREPDEDVTPRSNGS 108
>At2g20950.3 68415.m02473 expressed protein
Length = 505
Score = 29.5 bits (63), Expect = 1.0
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 270 PTYESSVPYRPSRPDGGAFPRSRGT 196
P Y S P RP PD PRS G+
Sbjct: 84 PVYRYSTPERPREPDEDVTPRSNGS 108
>At2g20950.2 68415.m02472 expressed protein
Length = 503
Score = 29.5 bits (63), Expect = 1.0
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 270 PTYESSVPYRPSRPDGGAFPRSRGT 196
P Y S P RP PD PRS G+
Sbjct: 84 PVYRYSTPERPREPDEDVTPRSNGS 108
>At2g20950.1 68415.m02471 expressed protein
Length = 520
Score = 29.5 bits (63), Expect = 1.0
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 270 PTYESSVPYRPSRPDGGAFPRSRGT 196
P Y S P RP PD PRS G+
Sbjct: 84 PVYRYSTPERPREPDEDVTPRSNGS 108
>At1g53990.1 68414.m06151 GDSL-motif lipase/hydrolase family
protein similar to myrosinase-associated proteins from
[Brassica napus] GI:1769968 GI:1769970, SP|P40603
Anther-specific proline-rich protein APG {Brassica
napus}; contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase
Length = 367
Score = 29.5 bits (63), Expect = 1.0
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 1 VSLGSLRCTDNNEAVQ*QVNLFIYNRTI 84
+S+GS+ C DNN V Q LF++ ++
Sbjct: 16 LSIGSINCIDNNNLVTNQAALFVFGDSL 43
>At4g37000.1 68417.m05242 accelerated cell death 2 (ACD2) identical
to accelerated cell death 2 (ACD2) GI:12484129 from
[Arabidopsis thaliana]
Length = 319
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -3
Query: 288 LLCASSPTYESSVPYRPSRPDGGAFPRSRGTRREEH-HHLRNR 163
L +SSP+Y S + +PSR PR++ E+H HLR +
Sbjct: 9 LYSSSSPSYLSPLTSKPSRFSKNLRPRAQFQSMEDHDDHLRRK 51
>At1g71850.1 68414.m08303 expressed protein ; expression supported
by MPSS
Length = 470
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 203 LDRGKAPPSGRDGRYGTEDSYVGDEAQSKRGILTLK 310
L+RG+ S R GR +S D+AQS+R ++LK
Sbjct: 426 LERGRRNSSPRSGRRSFGNSGSRDKAQSRRSKISLK 461
>At3g58650.1 68416.m06537 expressed protein
Length = 723
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = +2
Query: 197 VPLDRGKAPPSGRDGRYGTEDSYVGDEAQSKRGILTLK*SIA 322
+PL R K+ P + R G ++S + ++ + KRG ++K +I+
Sbjct: 308 LPLSRKKSLPRSKKPRNGVQESGIYEDKRIKRGEKSIKCNIS 349
>At2g38430.1 68415.m04720 expressed protein
Length = 393
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -1
Query: 356 RHVIPVSDDSVSRWTI*GSGYLFCSVPRLLRTSPLS 249
R+ I S DS+S+W + GS + VP ++ PLS
Sbjct: 43 RNKIIYSGDSISKWFLVGSNGIEDDVPSYVKFVPLS 78
>At4g14140.1 68417.m02181 DNA (cytosine-5-)-methyltransferase (METII)
nearly identical to cytosine-5 methyltransferase (METII)
[Arabidopsis thaliana] GI:6523846
Length = 1519
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = -1
Query: 209 DRGEHGARSIITCETVLAHTGAIDYYQRGNFFVAHLE 99
+R HG+ S + CE +LA DY++ F + +++
Sbjct: 1190 NRFSHGSWSKVQCEMILAFLSFADYFRPKYFLLENVK 1226
>At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to
uclacyanin 3 GI:3395770 from [Arabidopsis thaliana];
contains Pfam profile PF02298: Plastocyanin-like domain;
identical to cDNA uclacyanin 3 (UCC3)GI:3395769
Length = 222
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -3
Query: 309 LRVRIPLLLCASSPTYESSVPYRPSRP 229
+++ +P+L A SP+ SS P PS P
Sbjct: 112 MKLAVPVLAAAPSPSTPSSPPSTPSTP 138
>At3g18370.1 68416.m02336 C2 domain-containing protein contains Pfam
profile: PF00168 C2 domain
Length = 815
Score = 27.1 bits (57), Expect = 5.5
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 345 DDMAKIWHHTVYNELRVVPEEH 410
+D+ K W TV+N + P EH
Sbjct: 76 EDLTKKWRQTVFNASTITPLEH 97
>At5g65560.1 68418.m08249 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 915
Score = 26.6 bits (56), Expect = 7.2
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = -2
Query: 241 TITP*WRGLPTIEGNTA----RGASSPAKPSWHIPEPLTTTNAATSSSHILN*F 92
+++P R LP E ++ R S +KP+WH L + +A S SH+ + F
Sbjct: 44 SVSPLLRNLPEEESDSMSVPHRLLSILSKPNWHKSPSLKSMVSAISPSHVSSLF 97
>At3g51540.1 68416.m05644 expressed protein mucin 5AC, Homo sapiens,
PIR:S53363
Length = 438
Score = 26.6 bits (56), Expect = 7.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 214 PTIEGNTARGASSPAKPSWHIPEPLTTTNAATSSS 110
PT G+T R ++ P S +P+ TTT S+S
Sbjct: 113 PTRSGSTIRPSNIPTIRSSSVPKKTTTTQIQASAS 147
>At1g77080.5 68414.m08973 MADS-box protein AGL27-II (AGL27) / MADS
affecting flowering 1 (MAF1) contains similarity to MADS
box transcription factor GI:3688591 from [Triticum
aestivum]; contains Pfam domain PF00319: SRF-type
transcription factor (DNA-binding and dimerisation
domain); contains Pfam domain PF01486: K-box region
Length = 176
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 105 MCDEEVAALVVVNGSGMCQDGFAGDDAPRAV 197
+C+ VA +VVV+ SG D +GDD + +
Sbjct: 38 LCESSVA-VVVVSASGKLYDSSSGDDISKII 67
>At1g77080.4 68414.m08976 MADS-box protein AGL27-II (AGL27) / MADS
affecting flowering 1 (MAF1) contains similarity to MADS
box transcription factor GI:3688591 from [Triticum
aestivum]; contains Pfam domain PF00319: SRF-type
transcription factor (DNA-binding and dimerisation
domain); contains Pfam domain PF01486: K-box region
Length = 196
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 105 MCDEEVAALVVVNGSGMCQDGFAGDDAPRAV 197
+C+ VA +VVV+ SG D +GDD + +
Sbjct: 38 LCESSVA-VVVVSASGKLYDSSSGDDISKII 67
>At1g77080.3 68414.m08974 MADS-box protein AGL27-II (AGL27) / MADS
affecting flowering 1 (MAF1) contains similarity to MADS
box transcription factor GI:3688591 from [Triticum
aestivum]; contains Pfam domain PF00319: SRF-type
transcription factor (DNA-binding and dimerisation
domain); contains Pfam domain PF01486: K-box region
Length = 173
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 105 MCDEEVAALVVVNGSGMCQDGFAGDDAPRAV 197
+C+ VA +VVV+ SG D +GDD + +
Sbjct: 38 LCESSVA-VVVVSASGKLYDSSSGDDISKII 67
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 26.2 bits (55), Expect = 9.6
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = -1
Query: 266 RTSPLSHTDHHALMAGPSHDRGEHGARSIITCETVLAHTGAI 141
R L TD A R GA ++ C T+ HTG +
Sbjct: 27 RRLQLLDTDVARYSAAQGRTRVSFGATDLVCCRTLQGHTGKV 68
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 26.2 bits (55), Expect = 9.6
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = -1
Query: 266 RTSPLSHTDHHALMAGPSHDRGEHGARSIITCETVLAHTGAI 141
R L TD A R GA ++ C T+ HTG +
Sbjct: 27 RRLQLLDTDVARYSAAQGRTRVSFGATDLVCCRTLQGHTGKV 68
>At1g10100.1 68414.m01139 hypothetical protein
Length = 162
Score = 26.2 bits (55), Expect = 9.6
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1
Query: 284 SVPRLLRTSPLSHTDHHALM 225
SV RL+R SH DHH +M
Sbjct: 37 SVGRLIRAGGESHEDHHQVM 56
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,243,395
Number of Sequences: 28952
Number of extensions: 225955
Number of successful extensions: 756
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 733
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 685039728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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