Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1605
         (814 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0UZY8 Cluster: Resolvase-like; n=1; Clostridium cellul...    34   3.7  
UniRef50_UPI00015B54CF Cluster: PREDICTED: similar to conserved ...    33   8.6  

>UniRef50_A0UZY8 Cluster: Resolvase-like; n=1; Clostridium
           cellulolyticum H10|Rep: Resolvase-like - Clostridium
           cellulolyticum H10
          Length = 552

 Score = 34.3 bits (75), Expect = 3.7
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = +1

Query: 619 LRAVPSIISFLTDVFDGYSSFVSKLKIEKKKTKNSLNPLILVKFVRVP-RFLISGNDVKV 795
           LR +P     + D++D +  F S  K+EK   +N L     V F R   RFL++     +
Sbjct: 181 LRIIPEEAELVKDIYDKFIIFKSMTKVEKSLLENRLRTKNGVDFSRFSLRFLLTNPVYAI 240

Query: 796 VVASLY 813
             A LY
Sbjct: 241 ADAKLY 246


>UniRef50_UPI00015B54CF Cluster: PREDICTED: similar to conserved
           hypothetical protein; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to conserved hypothetical protein -
           Nasonia vitripennis
          Length = 653

 Score = 33.1 bits (72), Expect = 8.6
 Identities = 20/77 (25%), Positives = 37/77 (48%)
 Frame = +1

Query: 583 NVVDR*VFSNRWLRAVPSIISFLTDVFDGYSSFVSKLKIEKKKTKNSLNPLILVKFVRVP 762
           N++D   +   W+  VP I ++  D F   S F+      KK+ KN  +  +L  ++   
Sbjct: 280 NIIDVSSWLGTWMALVPLIGTYAVDTFFVMSGFLMTYNFFKKRQKNEESFNVLYHYIH-- 337

Query: 763 RFLISGNDVKVVVASLY 813
           R+L     +  +VAS++
Sbjct: 338 RYLRLTLPIAALVASMF 354


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 642,145,630
Number of Sequences: 1657284
Number of extensions: 10781973
Number of successful extensions: 24532
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 23745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24523
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 70377768045
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)