BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1605 (814 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_A0UZY8 Cluster: Resolvase-like; n=1; Clostridium cellul... 34 3.7 UniRef50_UPI00015B54CF Cluster: PREDICTED: similar to conserved ... 33 8.6 >UniRef50_A0UZY8 Cluster: Resolvase-like; n=1; Clostridium cellulolyticum H10|Rep: Resolvase-like - Clostridium cellulolyticum H10 Length = 552 Score = 34.3 bits (75), Expect = 3.7 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Frame = +1 Query: 619 LRAVPSIISFLTDVFDGYSSFVSKLKIEKKKTKNSLNPLILVKFVRVP-RFLISGNDVKV 795 LR +P + D++D + F S K+EK +N L V F R RFL++ + Sbjct: 181 LRIIPEEAELVKDIYDKFIIFKSMTKVEKSLLENRLRTKNGVDFSRFSLRFLLTNPVYAI 240 Query: 796 VVASLY 813 A LY Sbjct: 241 ADAKLY 246 >UniRef50_UPI00015B54CF Cluster: PREDICTED: similar to conserved hypothetical protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to conserved hypothetical protein - Nasonia vitripennis Length = 653 Score = 33.1 bits (72), Expect = 8.6 Identities = 20/77 (25%), Positives = 37/77 (48%) Frame = +1 Query: 583 NVVDR*VFSNRWLRAVPSIISFLTDVFDGYSSFVSKLKIEKKKTKNSLNPLILVKFVRVP 762 N++D + W+ VP I ++ D F S F+ KK+ KN + +L ++ Sbjct: 280 NIIDVSSWLGTWMALVPLIGTYAVDTFFVMSGFLMTYNFFKKRQKNEESFNVLYHYIH-- 337 Query: 763 RFLISGNDVKVVVASLY 813 R+L + +VAS++ Sbjct: 338 RYLRLTLPIAALVASMF 354 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 642,145,630 Number of Sequences: 1657284 Number of extensions: 10781973 Number of successful extensions: 24532 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 23745 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 24523 length of database: 575,637,011 effective HSP length: 99 effective length of database: 411,565,895 effective search space used: 70377768045 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -