Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1604
(770 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF068713-6|AAC17797.1| 282|Caenorhabditis elegans Serpentine re... 29 4.8
U28739-7|AAB93458.1| 681|Caenorhabditis elegans Cell division c... 28 8.5
U28739-6|AAM54206.1| 695|Caenorhabditis elegans Cell division c... 28 8.5
U28739-5|AAT68903.1| 707|Caenorhabditis elegans Cell division c... 28 8.5
U28739-4|AAM54205.1| 693|Caenorhabditis elegans Cell division c... 28 8.5
U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division c... 28 8.5
AY661747-1|AAT74546.1| 707|Caenorhabditis elegans CDC-14 phosph... 28 8.5
AY661746-1|AAT74545.1| 695|Caenorhabditis elegans CDC-14 phosph... 28 8.5
AY661745-1|AAT74544.1| 681|Caenorhabditis elegans CDC-14 phosph... 28 8.5
AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14 phosph... 28 8.5
AY661743-1|AAT74542.1| 693|Caenorhabditis elegans CDC-14 phosph... 28 8.5
AF000363-1|AAB94407.1| 681|Caenorhabditis elegans protein phosp... 28 8.5
>AF068713-6|AAC17797.1| 282|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 67 protein.
Length = 282
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = +2
Query: 182 LVNIYLYIKKKVLFRLLCMPGSRAQKRLSVEPEKLLTV*SH-----IIKLYRLVGMVTEE 346
+ I +++ +LF + C+ G ++ +S+ + + + KLY L GM+++
Sbjct: 15 ICQINIFLNSSLLFTIFCLKGITSKSDMSLVYSRFAADIGYSCSIIVFKLYVLAGMISKT 74
Query: 347 GILSNRI 367
IL N I
Sbjct: 75 FILKNII 81
>U28739-7|AAB93458.1| 681|Caenorhabditis elegans Cell division
cycle related protein14, isoform c protein.
Length = 681
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 550 RRVQIQNGYSRAPVSV 597
RRVQ+QNG S APV++
Sbjct: 401 RRVQVQNGRSTAPVTI 416
>U28739-6|AAM54206.1| 695|Caenorhabditis elegans Cell division
cycle related protein14, isoform d protein.
Length = 695
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 550 RRVQIQNGYSRAPVSV 597
RRVQ+QNG S APV++
Sbjct: 401 RRVQVQNGRSTAPVTI 416
>U28739-5|AAT68903.1| 707|Caenorhabditis elegans Cell division
cycle related protein14, isoform e protein.
Length = 707
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 550 RRVQIQNGYSRAPVSV 597
RRVQ+QNG S APV++
Sbjct: 401 RRVQVQNGRSTAPVTI 416
>U28739-4|AAM54205.1| 693|Caenorhabditis elegans Cell division
cycle related protein14, isoform a protein.
Length = 693
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 550 RRVQIQNGYSRAPVSV 597
RRVQ+QNG S APV++
Sbjct: 401 RRVQVQNGRSTAPVTI 416
>U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division
cycle related protein14, isoform b protein.
Length = 1063
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 550 RRVQIQNGYSRAPVSV 597
RRVQ+QNG S APV++
Sbjct: 401 RRVQVQNGRSTAPVTI 416
>AY661747-1|AAT74546.1| 707|Caenorhabditis elegans CDC-14
phosphatase isoform E protein.
Length = 707
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 550 RRVQIQNGYSRAPVSV 597
RRVQ+QNG S APV++
Sbjct: 401 RRVQVQNGRSTAPVTI 416
>AY661746-1|AAT74545.1| 695|Caenorhabditis elegans CDC-14
phosphatase isoform D protein.
Length = 695
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 550 RRVQIQNGYSRAPVSV 597
RRVQ+QNG S APV++
Sbjct: 401 RRVQVQNGRSTAPVTI 416
>AY661745-1|AAT74544.1| 681|Caenorhabditis elegans CDC-14
phosphatase isoform C protein.
Length = 681
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 550 RRVQIQNGYSRAPVSV 597
RRVQ+QNG S APV++
Sbjct: 401 RRVQVQNGRSTAPVTI 416
>AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14
phosphatase isoform B protein.
Length = 1063
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 550 RRVQIQNGYSRAPVSV 597
RRVQ+QNG S APV++
Sbjct: 401 RRVQVQNGRSTAPVTI 416
>AY661743-1|AAT74542.1| 693|Caenorhabditis elegans CDC-14
phosphatase isoform A protein.
Length = 693
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 550 RRVQIQNGYSRAPVSV 597
RRVQ+QNG S APV++
Sbjct: 401 RRVQVQNGRSTAPVTI 416
>AF000363-1|AAB94407.1| 681|Caenorhabditis elegans protein
phosphatase CDC14 protein.
Length = 681
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 550 RRVQIQNGYSRAPVSV 597
RRVQ+QNG S APV++
Sbjct: 401 RRVQVQNGRSTAPVTI 416
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,089,937
Number of Sequences: 27780
Number of extensions: 229456
Number of successful extensions: 499
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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