Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1603
         (745 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    25   0.64 
EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic hor...    23   2.0  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      23   3.4  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   6.0  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   6.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.9  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = -1

Query: 418 VQLNSRLI*LFNCLTHSEALGPAFASEGISTGAWGDAVNSSWSK 287
           V+ +  ++ L  C+T   A GP    E  S G     + ++W K
Sbjct: 507 VRQHPYIVSLIGCVTEGRAEGPLLVVEYCSRGDLQTYLRTAWDK 550


>EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic
           hormone 1 protein.
          Length = 73

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -3

Query: 119 GLTPAFSRFIRSRGHESGTISISDANGCTSSEDPIIM 9
           G+  A   F    G  SG+ + SDAN C    + I++
Sbjct: 15  GVCTAQLNFSTDWGKRSGSSAGSDANNCKEPVETIML 51


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 354 PRLLLKVSVPGHGETQSIVLGPSVHV 277
           PRL  K+ V G   T    + P +HV
Sbjct: 24  PRLNSKIQVSGASTTDECQVTPVIHV 49


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -2

Query: 363 HWVPRLLLKVSVPGH 319
           HW PR+L+   +  H
Sbjct: 166 HWYPRMLISTKLLAH 180


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -2

Query: 363 HWVPRLLLKVSVPGH 319
           HW PR+L+   +  H
Sbjct: 166 HWYPRMLISTKLLAH 180


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/26 (26%), Positives = 17/26 (65%)
 Frame = -3

Query: 467 YLNHIMAFLRFIQVIRGTIKFEVNLI 390
           ++N ++   +FI+ IR  ++F+V  +
Sbjct: 455 WINSVINRWKFIEFIRKVLEFDVKCV 480


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,842
Number of Sequences: 336
Number of extensions: 3726
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)