Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1603
(745 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0155 - 15275561-15276199,15277370-15278299 37 0.019
02_04_0302 - 21829991-21830626,21831864-21832784 37 0.019
02_02_0438 + 10261084-10262061,10265049-10265690 33 0.24
06_03_0882 + 25638649-25639575,25639717-25639770,25639792-25639806 31 0.73
02_04_0301 + 21807537-21808460,21809786-21810409 31 0.73
02_01_0629 - 4721029-4721673,4721802-4722105,4722129-4722709 31 0.73
01_07_0062 - 40826287-40826985 31 0.97
12_01_0017 - 127617-127775,127920-128000,128284-128395,128486-12... 31 1.3
10_08_0157 - 15292774-15293397,15296583-15296804 30 1.7
10_08_0156 - 15282111-15282752,15284787-15285719 30 1.7
06_03_0899 - 25776159-25776797,25776898-25777806,25779425-257795... 30 1.7
06_03_0895 - 25739515-25740498 30 2.2
02_04_0075 - 19481431-19481434,19482388-19482755 30 2.2
01_06_0187 - 27296834-27296980,27297567-27297731,27297820-272979... 30 2.2
03_01_0032 + 300759-301988 29 2.9
08_02_0336 - 15896545-15897660 29 3.9
08_01_0405 - 3597236-3597549,3598333-3598402 29 5.2
06_03_0142 + 17208577-17209485,17209578-17210195 29 5.2
06_02_0359 + 15155052-15155097,15155537-15155769 29 5.2
01_06_1450 + 37448664-37448936,37449643-37449885 29 5.2
11_06_0488 + 24185248-24185622,24185741-24186277,24186371-24186997 28 6.8
09_02_0192 - 5589395-5590021,5590120-5590560,5590781-5591242 28 6.8
07_03_0627 - 20061951-20062391,20062912-20062960,20063386-200638... 28 6.8
06_03_0891 + 25708864-25709596,25709629-25709729,25710047-257102... 28 6.8
06_03_0884 + 25651238-25652164,25653851-25654504 28 6.8
05_01_0032 + 217055-218074 28 6.8
04_04_0223 - 23723055-23723223,23723316-23723424,23723588-237236... 28 6.8
03_05_1080 + 30229828-30230707,30230861-30231110,30231265-30231499 28 6.8
01_02_0072 + 10828121-10828804,10828912-10828947,10829042-10829833 28 6.8
11_01_0017 - 129261-129335,129352-129426,129565-129645,129929-13... 28 9.0
02_02_0071 + 6555126-6555605,6556068-6557123 28 9.0
02_02_0070 + 6552894-6553409 28 9.0
>10_08_0155 - 15275561-15276199,15277370-15278299
Length = 522
Score = 36.7 bits (81), Expect = 0.019
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = -1
Query: 274 RATNAR--SHPPIPVCLPSPGSLHHNLLASPHLYRNLRLTVNLH 149
RATN + PP P LP GSLHH ++ SP ++R++R H
Sbjct: 29 RATNKPRLNLPPGPWTLPVIGSLHHLVMRSPSIHRSMRALAEKH 72
>02_04_0302 - 21829991-21830626,21831864-21832784
Length = 518
Score = 36.7 bits (81), Expect = 0.019
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = -1
Query: 250 PPIPVCLPSPGSLHHNLLASPHLYRNLRLTVNLHTLIL 137
PP P LP GSLHH ++ SP ++R+LR H I+
Sbjct: 34 PPGPWTLPLIGSLHHLVMKSPQIHRSLRALSEKHGPIM 71
>02_02_0438 + 10261084-10262061,10265049-10265690
Length = 539
Score = 33.1 bits (72), Expect = 0.24
Identities = 21/45 (46%), Positives = 26/45 (57%)
Frame = -1
Query: 268 TNARSHPPIPVCLPSPGSLHHNLLASPHLYRNLRLTVNLHTLILL 134
T A++ PP P LP GSLHH L ASP LRL+ L+L+
Sbjct: 52 TGAKNLPPGPWNLPVIGSLHHLLGASPPHRALLRLSRRHGPLMLV 96
>06_03_0882 + 25638649-25639575,25639717-25639770,25639792-25639806
Length = 331
Score = 31.5 bits (68), Expect = 0.73
Identities = 18/33 (54%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -1
Query: 280 CSR-ATNARSHPPIPVCLPSPGSLHHNLLASPH 185
CSR AT R PP P LP GSLHH + PH
Sbjct: 33 CSRTATAQRRLPPGPWQLPVIGSLHHLIGKLPH 65
>02_04_0301 + 21807537-21808460,21809786-21810409
Length = 515
Score = 31.5 bits (68), Expect = 0.73
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -1
Query: 250 PPIPVCLPSPGSLHHNLLA-SPHLYRNLRLTVNLHTLIL 137
PP P LP GSLHH ++ SP +R+LR H I+
Sbjct: 34 PPGPWTLPLIGSLHHLVMTKSPQTHRSLRALSEKHGPIM 72
>02_01_0629 - 4721029-4721673,4721802-4722105,4722129-4722709
Length = 509
Score = 31.5 bits (68), Expect = 0.73
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -1
Query: 250 PPIPVCLPSPGSLHHNLLASPHLYRNLRLTVNLHTLILLF 131
PP P LP GSLHH L+ PH++R + H L++
Sbjct: 40 PPGPWRLPVIGSLHH-LMGKPHVHRAMADLARRHGAPLMY 78
>01_07_0062 - 40826287-40826985
Length = 232
Score = 31.1 bits (67), Expect = 0.97
Identities = 19/69 (27%), Positives = 29/69 (42%)
Frame = -3
Query: 245 HPSLSAKSWQPSSQSPSLATSL*EPSSNCKPPHINPLILNIGGLTPAFSRFIRSRGHESG 66
+ + +A S PSS + L P C P ++PL+ GG + S + S E G
Sbjct: 128 YAAAAASSPAPSSPGFMVRDELLAPGDECSTPGLSPLLGTTGGYSVRVSNY-SSEEEEDG 186
Query: 65 TISISDANG 39
+D G
Sbjct: 187 DYGHADGGG 195
>12_01_0017 -
127617-127775,127920-128000,128284-128395,128486-129538,
129617-129705,130136-130309,130566-130687,130790-130924,
131132-131494,131561-131728,131850-131889
Length = 831
Score = 30.7 bits (66), Expect = 1.3
Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 3/86 (3%)
Frame = -3
Query: 263 CSKSSPHPSLSAKSWQPSSQSPSLATSL*EP---SSNCKPPHINPLILNIGGLTPAFSRF 93
CS + P SS PS+ ++L S C P +N + G T
Sbjct: 464 CSSTEPAEDSCFLKVICSSSEPSVGSNLTTSCISSPGCTPNDLNSQSKSDNGETAVDIEN 523
Query: 92 IRSRGHESGTISISDANGCTSSEDPI 15
S G SGT+ S+ N CTS+ D +
Sbjct: 524 SLS-GETSGTVCSSEGNNCTSATDSL 548
>10_08_0157 - 15292774-15293397,15296583-15296804
Length = 281
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -1
Query: 277 SRATNARSH-PPIPVCLPSPGSLHHNLLASPHLYRNLRLTVNLH 149
S AT R + PP P LP GS+HH L+ S ++R++R H
Sbjct: 26 SYATKPRLNLPPGPWTLPVIGSIHH-LVGSHPIHRSMRALAEKH 68
>10_08_0156 - 15282111-15282752,15284787-15285719
Length = 524
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -1
Query: 277 SRATNARSH-PPIPVCLPSPGSLHHNLLASPHLYRNLRLTVNLH 149
S AT R + PP P LP GSLHH L+ S ++R++R H
Sbjct: 27 SYATKPRLNLPPGPWKLPVIGSLHH-LVGSHAIHRSMRALAEKH 69
>06_03_0899 -
25776159-25776797,25776898-25777806,25779425-25779592,
25779703-25779890,25779993-25780137,25780566-25780775
Length = 752
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = -1
Query: 265 NARSHPPIPVCLPSPGSLHHNLLASPHLYRNLRLTVNLHTLILLFSI 125
N + PP P LP GSLHH A PH R LR H ++L +
Sbjct: 273 NGENPPPGPWQLPVIGSLHHLAGALPH--RALRDLATRHGELMLLRL 317
>06_03_0895 - 25739515-25740498
Length = 327
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -1
Query: 274 RATNARSHPPIPVCLPSPGSLHHNLLAS-PHLYRNLRLTVNLHTLILL 134
R AR PP P LP G LHH L PH ++ L L+LL
Sbjct: 30 RLAGARRPPPGPWALPVIGHLHHLLAGKLPHHHKLRDLAARHGPLMLL 77
>02_04_0075 - 19481431-19481434,19482388-19482755
Length = 123
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -1
Query: 250 PPIPVCLPSPGSLHHNLLASPHLYRNLRLTVNLH 149
PP P LP GS+HH L ++P+ +R LR H
Sbjct: 35 PPGPWTLPVIGSIHH-LASNPNTHRALRALSQKH 67
>01_06_0187 -
27296834-27296980,27297567-27297731,27297820-27297918,
27299276-27299616,27299824-27300643
Length = 523
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = -1
Query: 250 PPIPVCLPSP----GSLHHNLLASPHLYRNLRLTVNLHTLILLFS 128
P IPV + G HH LLA+P +RN+R+ H I+ FS
Sbjct: 351 PRIPVLFSNSERTFGPPHHPLLANPVNHRNIRILPPEHATIMDFS 395
>03_01_0032 + 300759-301988
Length = 409
Score = 29.5 bits (63), Expect = 2.9
Identities = 25/77 (32%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Frame = -3
Query: 260 SKSSPH----PSLSAKSWQPSSQSPSLATSL*EPSSNCKPPHINPLILNIGGLTPAFSRF 93
S SPH +LSA QP L E CK NP ++N+G +RF
Sbjct: 291 SDESPHYLAASNLSAMDSQPQLVGRWEELYLPEDLKECK----NPQLVNLGSGRFCITRF 346
Query: 92 IRSRGHESGTISISDAN 42
SR H S + D N
Sbjct: 347 FHSRSHNSDSRGDVDQN 363
>08_02_0336 - 15896545-15897660
Length = 371
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = -1
Query: 454 SWLFFASFRSSEVQLNSRLI*LFNCLTHSEALGPAFASEGISTGAWGDAVNSSWSKRSCS 275
S ++F S ++E+ L + L+NC H + E ++GA+ + N +W+KR S
Sbjct: 294 SLIYFFSGCTNEILLPNAGYHLYNC--HELTIPLQTIEESRASGAYRETRNMTWNKRESS 351
Query: 274 RAT 266
++
Sbjct: 352 SSS 354
>08_01_0405 - 3597236-3597549,3598333-3598402
Length = 127
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -1
Query: 286 RSCSRATNARSHPPIPVCLPSPGSLHHNLLASPHL 182
R C R A + PP+ V P P S+ L P L
Sbjct: 27 RHCLRTNEACTRPPVSVVAPGPASVARARLPPPSL 61
>06_03_0142 + 17208577-17209485,17209578-17210195
Length = 508
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/50 (42%), Positives = 26/50 (52%)
Frame = -1
Query: 277 SRATNARSHPPIPVCLPSPGSLHHNLLASPHLYRNLRLTVNLHTLILLFS 128
SR ++ R PP P LP GSLHH L +R LR LH ++L S
Sbjct: 26 SRESDLRL-PPGPWRLPLIGSLHH-LFGRTLPHRALRDLARLHGPLMLLS 73
>06_02_0359 + 15155052-15155097,15155537-15155769
Length = 92
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -1
Query: 331 STGAWGDAVNSSWSKRSCSRATNARSHPPIPVCLPS 224
STG G A S+ + ++CSR+ ARS P C+ S
Sbjct: 31 STGLTGTATRSTAALQACSRSAMARSAFPNVHCMKS 66
>01_06_1450 + 37448664-37448936,37449643-37449885
Length = 171
Score = 28.7 bits (61), Expect = 5.2
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = -1
Query: 376 THSEALGPAFASE-GISTGAWGDAVNSSWSKRS----CSRATNARSHPPIPVCLPSPGSL 212
T +E +G A A G S G GD SK+S CS + H P+P+ P S
Sbjct: 63 TATEGIGTADAPALGSSGGGGGDEGGGRRSKQSAVLICSNPSQTLIHTPMPL----PKST 118
Query: 211 HHNLLASPHLYR 176
++ ASP L +
Sbjct: 119 RPSVTASPELIK 130
>11_06_0488 + 24185248-24185622,24185741-24186277,24186371-24186997
Length = 512
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = -1
Query: 250 PPIPVCLPSPGSLHHNLLASP--HLYRNLRL 164
PP P LP G LHH + A P H RN+ L
Sbjct: 42 PPSPWALPVIGHLHHLMGALPPQHAMRNIAL 72
>09_02_0192 - 5589395-5590021,5590120-5590560,5590781-5591242
Length = 509
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -1
Query: 250 PPIPVCLPSPGSLHHNLLASPHLYRNLRLTVNLHTLILLFSI 125
PP P LP GS+HH + PH R LR +H +++ +
Sbjct: 35 PPGPWRLPVIGSMHHLVNVLPH--RKLRELAAVHGPLMMLQL 74
>07_03_0627 - 20061951-20062391,20062912-20062960,20063386-20063851,
20063933-20064139,20064267-20064405,20065146-20065282,
20065414-20065657,20065808-20065969,20066049-20066167,
20066240-20066314,20066327-20066500,20066607-20066769,
20067211-20067420,20067515-20067668,20067761-20067839,
20067999-20068146,20068501-20068671,20068771-20069385
Length = 1250
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = -3
Query: 335 YQYRGMGRRSQ*FLVQAFMFTGY*CSKSSPHPSLSAKSWQPSSQSPSLATSL 180
Y G R + LV G +KSSP P+ KSWQPS SL L
Sbjct: 1015 YSPEGTQRIGRIDLVPPLSLDGNPTAKSSP-PTSPLKSWQPSVHVQSLYDKL 1065
>06_03_0891 +
25708864-25709596,25709629-25709729,25710047-25710259,
25710328-25710969
Length = 562
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -1
Query: 250 PPIPVCLPSPGSLHHNLLASPHLYRNLRLTVNLHTLILLFSI 125
PP P LP GSLHH + PH R +R H ++L I
Sbjct: 43 PPGPWTLPIIGSLHHLVGQIPH--RAMRDLARRHGPVMLLRI 82
>06_03_0884 + 25651238-25652164,25653851-25654504
Length = 526
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -1
Query: 277 SRATNARSHPPIPVCLPSPGSLHHNLLASPH 185
SR A+ PP P LP GSLHH PH
Sbjct: 33 SRKATAQRLPPGPWQLPVIGSLHHLAGKLPH 63
>05_01_0032 + 217055-218074
Length = 339
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = -3
Query: 173 PSSNCKPPHINPLILNIGGLTPAFSRFIRSRGHESGTISISDAN 42
P+S KPP +N + L+ LT + R + S+ + +++S N
Sbjct: 166 PASLAKPPKLNSIDLSRNRLTGSIPRLLLSKAGQQAFLTMSHNN 209
>04_04_0223 -
23723055-23723223,23723316-23723424,23723588-23723690,
23723781-23723812,23724024-23724241,23724322-23724437,
23725055-23725310,23725719-23725806,23725928-23726005,
23726199-23726274,23726525-23726583,23727715-23728066
Length = 551
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/58 (32%), Positives = 23/58 (39%)
Frame = -1
Query: 349 FASEGISTGAWGDAVNSSWSKRSCSRATNARSHPPIPVCLPSPGSLHHNLLASPHLYR 176
F S G +TG + S W K +CS + R P C HH LLA R
Sbjct: 248 FCSNGYATGLFAPGRCSPWEKGNCSVGDSGRE--PYTAC-------HHQLLAHAETVR 296
>03_05_1080 + 30229828-30230707,30230861-30231110,30231265-30231499
Length = 454
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -1
Query: 250 PPIPVCLPSPGSLHHNLLASPHLYRNLRLTVNLHTLILLFSI 125
PP P LP GS+HH + A PH R +R +H +++ +
Sbjct: 36 PPGPWRLPVIGSMHHLVNALPH--RAMRDLAGVHGPLMMLRL 75
>01_02_0072 + 10828121-10828804,10828912-10828947,10829042-10829833
Length = 503
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = -1
Query: 361 LGPAFASEGISTGAWGDAVNSSWSKRSCSRATNARSHPPIPVCLPSPGSLHHNLLASPH 185
L AFAS IS + +K + A + S P P +PG H+ +PH
Sbjct: 16 LALAFASSFISAADGARSARHHHAKHAKRNAAHPPSQAPGPAARHAPGPARHHGAPAPH 74
>11_01_0017 -
129261-129335,129352-129426,129565-129645,129929-130040,
130131-131177,131256-131347,131773-131943,132150-132253,
132367-132501,132583-132724,132803-133059,133126-133337,
133417-133454
Length = 846
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = -3
Query: 170 SSNCKPPHINPLILNIGGLTPAFSRFIRSRGHESGTISISDANGCTSSEDPI 15
S C P +N + G T S G SGT+ S+ N CTS+ D +
Sbjct: 516 SPGCTPNDLNSQSKSDNGETAVDIENSLS-GETSGTVCSSEGNNCTSATDSL 566
>02_02_0071 + 6555126-6555605,6556068-6557123
Length = 511
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -1
Query: 286 RSCSRATNARSHPPIPVCLPSPGSLHHNLLASPHLYRNLRLTVNLHTLILLFSI 125
R +A A PP P LP GS+HH LA +R LR +H +++ +
Sbjct: 29 RGKKQAAAAAPTPPGPWRLPVIGSMHH--LAGKLAHRALRDLAAVHGPLMMLQL 80
>02_02_0070 + 6552894-6553409
Length = 171
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -1
Query: 286 RSCSRATNARSHPPIPVCLPSPGSLHHNLLASPHLYRNLRLTVNLHTLILLFSI 125
R +A A PP P LP GS+HH LA +R LR +H +++ +
Sbjct: 29 RGKKQAAAAAPTPPGPWRLPVIGSMHH--LAGKLAHRALRDLAAVHGPLMMLQL 80
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,824,483
Number of Sequences: 37544
Number of extensions: 389860
Number of successful extensions: 1205
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1203
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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