BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1603 (745 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_53663| Best HMM Match : Peptidase_M10 (HMM E-Value=0) 58 6e-09 SB_52409| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07 SB_52117| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06 SB_43176| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.011 SB_55815| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24 SB_39653| Best HMM Match : TP2 (HMM E-Value=1.2) 29 3.0 SB_48173| Best HMM Match : WD40 (HMM E-Value=7.3e-18) 29 5.3 SB_5823| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2 >SB_53663| Best HMM Match : Peptidase_M10 (HMM E-Value=0) Length = 684 Score = 58.4 bits (135), Expect = 6e-09 Identities = 34/66 (51%), Positives = 44/66 (66%) Frame = +1 Query: 1 DMLIIMGSSLEVQPFASLIDMVPDSCPRLLINREKAGVRPPILRIRGLMCGGLQLDEGSY 180 D++IIMG+SL VQPFASLID V + PRLLIN+EK G + ++ I G LD+ S Sbjct: 596 DLIIIMGTSLAVQPFASLIDRVLATTPRLLINKEKCGRQEELVTI--FNEGHAHLDKESR 653 Query: 181 RDVARL 198 +D A L Sbjct: 654 QDKAGL 659 >SB_52409| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 473 Score = 52.8 bits (121), Expect = 3e-07 Identities = 26/37 (70%), Positives = 29/37 (78%) Frame = +1 Query: 1 DMLIIMGSSLEVQPFASLIDMVPDSCPRLLINREKAG 111 D+LI+MG+SL VQPFASLI V PRLLINREK G Sbjct: 385 DLLIVMGTSLIVQPFASLIARVSVDTPRLLINREKCG 421 >SB_52117| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 545 Score = 50.8 bits (116), Expect = 1e-06 Identities = 21/37 (56%), Positives = 30/37 (81%) Frame = +1 Query: 1 DMLIIMGSSLEVQPFASLIDMVPDSCPRLLINREKAG 111 D+L++MG+SLEV+PFA +++ V S PR+LINRE G Sbjct: 271 DLLLVMGTSLEVEPFAGIVNEVSRSTPRVLINRESVG 307 >SB_43176| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 639 Score = 37.5 bits (83), Expect = 0.011 Identities = 16/34 (47%), Positives = 25/34 (73%) Frame = +1 Query: 1 DMLIIMGSSLEVQPFASLIDMVPDSCPRLLINRE 102 D+LI++GSSL+V+P A + + P++LINRE Sbjct: 224 DLLIVIGSSLKVRPVALIPSHISPEVPQILINRE 257 >SB_55815| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 152 Score = 33.1 bits (72), Expect = 0.24 Identities = 16/50 (32%), Positives = 28/50 (56%) Frame = -2 Query: 375 LIPRHWVPRLLLKVSVPGHGETQSIVLGPSVHVHGLLMLEVIPPSQSVCQ 226 ++ +HW+ LL ++VP E +++V + + +LEVI P VCQ Sbjct: 93 MVTKHWLDALLSIIAVPSKDENEAVVYSMRTRLLTINLLEVILP---VCQ 139 >SB_39653| Best HMM Match : TP2 (HMM E-Value=1.2) Length = 243 Score = 29.5 bits (63), Expect = 3.0 Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 8/86 (9%) Frame = -3 Query: 254 SSPHPSLSAKSWQPS-----SQSPSLATSL*EPSSNCKPPHINPLILNI---GGLTPAFS 99 +SP+ +L++ QP+ S + SL S+ S++ +N +N GL P+ S Sbjct: 116 ASPNSTLNSTEVQPTPTTTASHTASLEASI-NQSASISAQGVNGASINATATSGLVPSSS 174 Query: 98 RFIRSRGHESGTISISDANGCTSSED 21 + +GH SGT + + SSE+ Sbjct: 175 VSGQGQGHGSGTTTSAPTTSALSSEE 200 >SB_48173| Best HMM Match : WD40 (HMM E-Value=7.3e-18) Length = 659 Score = 28.7 bits (61), Expect = 5.3 Identities = 12/45 (26%), Positives = 25/45 (55%) Frame = -3 Query: 233 SAKSWQPSSQSPSLATSL*EPSSNCKPPHINPLILNIGGLTPAFS 99 + + W P+ +SP L T + + S+C P I+ L ++ + ++S Sbjct: 474 TCRLWNPTLKSPLLNTFILDKESSCTPTSIDFLRMDTSQMVASYS 518 >SB_5823| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2324 Score = 27.9 bits (59), Expect = 9.2 Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 9/92 (9%) Frame = -3 Query: 254 SSPHPSLSAKSWQP-SSQSPSLATSL*EPSSNCKPPHINPLILNIGG--LTPA------F 102 S+P +SA SW P ++ P +T+ + + P GG PA F Sbjct: 1076 SAPQAPMSAPSWMPVFTEGPGCSTAPTQTQATAANPDTGMPSPRFGGHPEEPAPHPRNVF 1135 Query: 101 SRFIRSRGHESGTISISDANGCTSSEDPIIMS 6 S F S G+ + T SD S +P + S Sbjct: 1136 SGFPSSSGYGTSTAKTSDTTWTARSYNPSVYS 1167 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 21,763,766 Number of Sequences: 59808 Number of extensions: 434594 Number of successful extensions: 1148 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1054 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1147 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 2010148439 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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