Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1603
         (745 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    30   0.066
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    30   0.066
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    27   0.61 
AY146720-1|AAO12080.1|  147|Anopheles gambiae odorant-binding pr...    27   0.81 
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    26   1.4  
AY752910-1|AAV30084.1|  250|Anopheles gambiae peroxidase 15 prot...    25   2.5  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    24   5.7  

>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 30.3 bits (65), Expect = 0.066
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = -2

Query: 324 GHGETQSIVLGPSVHVHGLLMLEVIPPSQSVCQVLAAFI 208
           G   T SI +  S+HV  LL++E+IPP+  V  +L  ++
Sbjct: 272 GEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYL 310


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 30.3 bits (65), Expect = 0.066
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = -2

Query: 324 GHGETQSIVLGPSVHVHGLLMLEVIPPSQSVCQVLAAFI 208
           G   T SI +  S+HV  LL++E+IPP+  V  +L  ++
Sbjct: 272 GEKVTLSISILISLHVFFLLVVEIIPPTSLVVPLLGKYL 310


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 27.1 bits (57), Expect = 0.61
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = -1

Query: 358 GPAFASEGISTGAWGDAVNSSWSKRSCSRATNARSHPPIPVCLPSPGS 215
           G A A+  ++TG  G   + S S   CS+ +   + PP P  L S  S
Sbjct: 754 GVAVAA-ALNTGGGGPPPDGSGSGSRCSKPSVTSTTPPTPASLSSSSS 800


>AY146720-1|AAO12080.1|  147|Anopheles gambiae odorant-binding
           protein AgamOBP15 protein.
          Length = 147

 Score = 26.6 bits (56), Expect = 0.81
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -1

Query: 331 STGAWGDAVNSSWSKRSCSRATNARSHPPIPVCL 230
           STG   DA   ++S   C + T      P+ VCL
Sbjct: 112 STGPIADACERAYSHHRCWKETEPELRLPVAVCL 145


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -2

Query: 324 GHGETQSIVLGPSVHVHGLLMLEVIPPSQSVCQVLAAFI 208
           G   + SI +  S+ V  LL+ E+IPP+  V  +L  F+
Sbjct: 268 GEKVSLSISILLSLTVFFLLLAEIIPPTSLVVPLLGKFV 306


>AY752910-1|AAV30084.1|  250|Anopheles gambiae peroxidase 15
           protein.
          Length = 250

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 255 LRALVAREHERLDQELLTASPH 320
           +  L+AREH R+  EL   +PH
Sbjct: 47  MHTLLAREHNRIATELGKINPH 68


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 10/23 (43%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = +1

Query: 310 RLPM-PRY*YLQKQTRDPVPRNE 375
           R+PM P Y  +Q++   P+PRN+
Sbjct: 697 RIPMDPGYPKIQQKEEKPMPRND 719


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 751,593
Number of Sequences: 2352
Number of extensions: 14485
Number of successful extensions: 35
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)