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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1603
         (745 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70310-7|CAA94364.1|  607|Caenorhabditis elegans Hypothetical pr...    37   0.013
Z81568-4|CAB04596.1|  509|Caenorhabditis elegans Hypothetical pr...    29   2.6  
U80846-5|AAP82647.1|  825|Caenorhabditis elegans Hypothetical pr...    29   3.5  
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr...    29   3.5  
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z81568-8|CAD89739.1|  496|Caenorhabditis elegans Hypothetical pr...    29   4.6  
Z81568-12|CAH10810.1|  493|Caenorhabditis elegans Hypothetical p...    28   8.0  
Z81568-7|CAD18874.1|  497|Caenorhabditis elegans Hypothetical pr...    28   8.0  
Z81568-6|CAB04598.1|  511|Caenorhabditis elegans Hypothetical pr...    28   8.0  
Z81568-5|CAB04597.1|  522|Caenorhabditis elegans Hypothetical pr...    28   8.0  
AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily a...    28   8.0  

>Z70310-7|CAA94364.1|  607|Caenorhabditis elegans Hypothetical
           protein R11A8.4 protein.
          Length = 607

 Score = 37.1 bits (82), Expect = 0.013
 Identities = 15/34 (44%), Positives = 26/34 (76%)
 Frame = +1

Query: 1   DMLIIMGSSLEVQPFASLIDMVPDSCPRLLINRE 102
           D+++++GSSL+V+P A +   V  + P++LINRE
Sbjct: 321 DLIVVIGSSLKVRPVALIPHCVDKNVPQILINRE 354


>Z81568-4|CAB04596.1|  509|Caenorhabditis elegans Hypothetical
           protein K08E3.5a protein.
          Length = 509

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
 Frame = -3

Query: 242 PSLSAKSWQPSSQSPSLATSL*EPS---SNCKPPHINPLILNIGGLTPAFSRFIRSR 81
           P  S++ W+ S++  +L +   E +   S CKP  +N     + G    F+RF+R++
Sbjct: 16  PDESSEEWKTSTKLEALGSMEGELAHLLSTCKPETLNHNKTELSGFRNLFARFLRAK 72


>U80846-5|AAP82647.1|  825|Caenorhabditis elegans Hypothetical
           protein K06A9.1c protein.
          Length = 825

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 21/70 (30%), Positives = 29/70 (41%)
 Frame = -3

Query: 260 SKSSPHPSLSAKSWQPSSQSPSLATSL*EPSSNCKPPHINPLILNIGGLTPAFSRFIRSR 81
           S SSP PS  + +    S +PS  TS   PS +  P    P   +   +TP  S      
Sbjct: 385 SSSSPQPSSQSPAPNTGSTTPS-QTSSQSPSPSMNPSSSTPTGSSQSTITPEGSTASSPT 443

Query: 80  GHESGTISIS 51
           G    T S++
Sbjct: 444 GSTGSTFSVA 453


>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
           protein K06A9.1a protein.
          Length = 1032

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 21/70 (30%), Positives = 29/70 (41%)
 Frame = -3

Query: 260 SKSSPHPSLSAKSWQPSSQSPSLATSL*EPSSNCKPPHINPLILNIGGLTPAFSRFIRSR 81
           S SSP PS  + +    S +PS  TS   PS +  P    P   +   +TP  S      
Sbjct: 592 SSSSPQPSSQSPAPNTGSTTPS-QTSSQSPSPSMNPSSSTPTGSSQSTITPEGSTASSPT 650

Query: 80  GHESGTISIS 51
           G    T S++
Sbjct: 651 GSTGSTFSVA 660


>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
           protein K06A9.1b protein.
          Length = 2232

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 21/70 (30%), Positives = 29/70 (41%)
 Frame = -3

Query: 260 SKSSPHPSLSAKSWQPSSQSPSLATSL*EPSSNCKPPHINPLILNIGGLTPAFSRFIRSR 81
           S SSP PS  + +    S +PS  TS   PS +  P    P   +   +TP  S      
Sbjct: 592 SSSSPQPSSQSPAPNTGSTTPS-QTSSQSPSPSMNPSSSTPTGSSQSTITPEGSTASSPT 650

Query: 80  GHESGTISIS 51
           G    T S++
Sbjct: 651 GSTGSTFSVA 660


>Z81568-8|CAD89739.1|  496|Caenorhabditis elegans Hypothetical
           protein K08E3.5e protein.
          Length = 496

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
 Frame = -3

Query: 242 PSLSAKSWQPSSQSPSLATSL*EPS---SNCKPPHINPLILNIGGLTPAFSRFIRSR 81
           P  S++ W+ S++  +L +   E +   S CKP  +N     + G    F+RF+R++
Sbjct: 3   PFPSSEEWKTSTKLEALGSMEGELAHLLSTCKPETLNHNKTELSGFRNLFARFLRAK 59


>Z81568-12|CAH10810.1|  493|Caenorhabditis elegans Hypothetical
           protein K08E3.5f protein.
          Length = 493

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
 Frame = -3

Query: 233 SAKSWQPSSQSPSLATSL*EPS---SNCKPPHINPLILNIGGLTPAFSRFIRSR 81
           S++ W+ S++  +L +   E +   S CKP  +N     + G    F+RF+R++
Sbjct: 3   SSEEWKTSTKLEALGSMEGELAHLLSTCKPETLNHNKTELSGFRNLFARFLRAK 56


>Z81568-7|CAD18874.1|  497|Caenorhabditis elegans Hypothetical
           protein K08E3.5d protein.
          Length = 497

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
 Frame = -3

Query: 233 SAKSWQPSSQSPSLATSL*EPS---SNCKPPHINPLILNIGGLTPAFSRFIRSR 81
           S++ W+ S++  +L +   E +   S CKP  +N     + G    F+RF+R++
Sbjct: 32  SSEEWKTSTKLEALGSMEGELAHLLSTCKPETLNHNKTELSGFRNLFARFLRAK 85


>Z81568-6|CAB04598.1|  511|Caenorhabditis elegans Hypothetical
           protein K08E3.5c protein.
          Length = 511

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
 Frame = -3

Query: 233 SAKSWQPSSQSPSLATSL*EPS---SNCKPPHINPLILNIGGLTPAFSRFIRSR 81
           S++ W+ S++  +L +   E +   S CKP  +N     + G    F+RF+R++
Sbjct: 21  SSEEWKTSTKLEALGSMEGELAHLLSTCKPETLNHNKTELSGFRNLFARFLRAK 74


>Z81568-5|CAB04597.1|  522|Caenorhabditis elegans Hypothetical
           protein K08E3.5b protein.
          Length = 522

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
 Frame = -3

Query: 233 SAKSWQPSSQSPSLATSL*EPS---SNCKPPHINPLILNIGGLTPAFSRFIRSR 81
           S++ W+ S++  +L +   E +   S CKP  +N     + G    F+RF+R++
Sbjct: 32  SSEEWKTSTKLEALGSMEGELAHLLSTCKPETLNHNKTELSGFRNLFARFLRAK 85


>AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 80 protein.
          Length = 4900

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = -1

Query: 367 EALGPAFASEGISTGAWGDAVNSSWSKRSCSRATNARSHPPIPVCLPS 224
           E+  P    E I   AW   + SS  + S  +A+     PP+PV LP+
Sbjct: 741 ESKEPELTQEEIDHIAW---IQSSAEQSSFEQASTVPDRPPLPVRLPT 785


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,398,642
Number of Sequences: 27780
Number of extensions: 339932
Number of successful extensions: 1025
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1025
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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