Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1603
(745 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70310-7|CAA94364.1| 607|Caenorhabditis elegans Hypothetical pr... 37 0.013
Z81568-4|CAB04596.1| 509|Caenorhabditis elegans Hypothetical pr... 29 2.6
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 29 3.5
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 29 3.5
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z81568-8|CAD89739.1| 496|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z81568-12|CAH10810.1| 493|Caenorhabditis elegans Hypothetical p... 28 8.0
Z81568-7|CAD18874.1| 497|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z81568-6|CAB04598.1| 511|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z81568-5|CAB04597.1| 522|Caenorhabditis elegans Hypothetical pr... 28 8.0
AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily a... 28 8.0
>Z70310-7|CAA94364.1| 607|Caenorhabditis elegans Hypothetical
protein R11A8.4 protein.
Length = 607
Score = 37.1 bits (82), Expect = 0.013
Identities = 15/34 (44%), Positives = 26/34 (76%)
Frame = +1
Query: 1 DMLIIMGSSLEVQPFASLIDMVPDSCPRLLINRE 102
D+++++GSSL+V+P A + V + P++LINRE
Sbjct: 321 DLIVVIGSSLKVRPVALIPHCVDKNVPQILINRE 354
>Z81568-4|CAB04596.1| 509|Caenorhabditis elegans Hypothetical
protein K08E3.5a protein.
Length = 509
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = -3
Query: 242 PSLSAKSWQPSSQSPSLATSL*EPS---SNCKPPHINPLILNIGGLTPAFSRFIRSR 81
P S++ W+ S++ +L + E + S CKP +N + G F+RF+R++
Sbjct: 16 PDESSEEWKTSTKLEALGSMEGELAHLLSTCKPETLNHNKTELSGFRNLFARFLRAK 72
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/70 (30%), Positives = 29/70 (41%)
Frame = -3
Query: 260 SKSSPHPSLSAKSWQPSSQSPSLATSL*EPSSNCKPPHINPLILNIGGLTPAFSRFIRSR 81
S SSP PS + + S +PS TS PS + P P + +TP S
Sbjct: 385 SSSSPQPSSQSPAPNTGSTTPS-QTSSQSPSPSMNPSSSTPTGSSQSTITPEGSTASSPT 443
Query: 80 GHESGTISIS 51
G T S++
Sbjct: 444 GSTGSTFSVA 453
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/70 (30%), Positives = 29/70 (41%)
Frame = -3
Query: 260 SKSSPHPSLSAKSWQPSSQSPSLATSL*EPSSNCKPPHINPLILNIGGLTPAFSRFIRSR 81
S SSP PS + + S +PS TS PS + P P + +TP S
Sbjct: 592 SSSSPQPSSQSPAPNTGSTTPS-QTSSQSPSPSMNPSSSTPTGSSQSTITPEGSTASSPT 650
Query: 80 GHESGTISIS 51
G T S++
Sbjct: 651 GSTGSTFSVA 660
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/70 (30%), Positives = 29/70 (41%)
Frame = -3
Query: 260 SKSSPHPSLSAKSWQPSSQSPSLATSL*EPSSNCKPPHINPLILNIGGLTPAFSRFIRSR 81
S SSP PS + + S +PS TS PS + P P + +TP S
Sbjct: 592 SSSSPQPSSQSPAPNTGSTTPS-QTSSQSPSPSMNPSSSTPTGSSQSTITPEGSTASSPT 650
Query: 80 GHESGTISIS 51
G T S++
Sbjct: 651 GSTGSTFSVA 660
>Z81568-8|CAD89739.1| 496|Caenorhabditis elegans Hypothetical
protein K08E3.5e protein.
Length = 496
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = -3
Query: 242 PSLSAKSWQPSSQSPSLATSL*EPS---SNCKPPHINPLILNIGGLTPAFSRFIRSR 81
P S++ W+ S++ +L + E + S CKP +N + G F+RF+R++
Sbjct: 3 PFPSSEEWKTSTKLEALGSMEGELAHLLSTCKPETLNHNKTELSGFRNLFARFLRAK 59
>Z81568-12|CAH10810.1| 493|Caenorhabditis elegans Hypothetical
protein K08E3.5f protein.
Length = 493
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = -3
Query: 233 SAKSWQPSSQSPSLATSL*EPS---SNCKPPHINPLILNIGGLTPAFSRFIRSR 81
S++ W+ S++ +L + E + S CKP +N + G F+RF+R++
Sbjct: 3 SSEEWKTSTKLEALGSMEGELAHLLSTCKPETLNHNKTELSGFRNLFARFLRAK 56
>Z81568-7|CAD18874.1| 497|Caenorhabditis elegans Hypothetical
protein K08E3.5d protein.
Length = 497
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = -3
Query: 233 SAKSWQPSSQSPSLATSL*EPS---SNCKPPHINPLILNIGGLTPAFSRFIRSR 81
S++ W+ S++ +L + E + S CKP +N + G F+RF+R++
Sbjct: 32 SSEEWKTSTKLEALGSMEGELAHLLSTCKPETLNHNKTELSGFRNLFARFLRAK 85
>Z81568-6|CAB04598.1| 511|Caenorhabditis elegans Hypothetical
protein K08E3.5c protein.
Length = 511
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = -3
Query: 233 SAKSWQPSSQSPSLATSL*EPS---SNCKPPHINPLILNIGGLTPAFSRFIRSR 81
S++ W+ S++ +L + E + S CKP +N + G F+RF+R++
Sbjct: 21 SSEEWKTSTKLEALGSMEGELAHLLSTCKPETLNHNKTELSGFRNLFARFLRAK 74
>Z81568-5|CAB04597.1| 522|Caenorhabditis elegans Hypothetical
protein K08E3.5b protein.
Length = 522
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = -3
Query: 233 SAKSWQPSSQSPSLATSL*EPS---SNCKPPHINPLILNIGGLTPAFSRFIRSR 81
S++ W+ S++ +L + E + S CKP +N + G F+RF+R++
Sbjct: 32 SSEEWKTSTKLEALGSMEGELAHLLSTCKPETLNHNKTELSGFRNLFARFLRAK 85
>AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily
assigned gene nameprotein 80 protein.
Length = 4900
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -1
Query: 367 EALGPAFASEGISTGAWGDAVNSSWSKRSCSRATNARSHPPIPVCLPS 224
E+ P E I AW + SS + S +A+ PP+PV LP+
Sbjct: 741 ESKEPELTQEEIDHIAW---IQSSAEQSSFEQASTVPDRPPLPVRLPT 785
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,398,642
Number of Sequences: 27780
Number of extensions: 339932
Number of successful extensions: 1025
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1025
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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