BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1603 (745 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z70310-7|CAA94364.1| 607|Caenorhabditis elegans Hypothetical pr... 37 0.013 Z81568-4|CAB04596.1| 509|Caenorhabditis elegans Hypothetical pr... 29 2.6 U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 29 3.5 U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 29 3.5 U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 3.5 Z81568-8|CAD89739.1| 496|Caenorhabditis elegans Hypothetical pr... 29 4.6 Z81568-12|CAH10810.1| 493|Caenorhabditis elegans Hypothetical p... 28 8.0 Z81568-7|CAD18874.1| 497|Caenorhabditis elegans Hypothetical pr... 28 8.0 Z81568-6|CAB04598.1| 511|Caenorhabditis elegans Hypothetical pr... 28 8.0 Z81568-5|CAB04597.1| 522|Caenorhabditis elegans Hypothetical pr... 28 8.0 AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily a... 28 8.0 >Z70310-7|CAA94364.1| 607|Caenorhabditis elegans Hypothetical protein R11A8.4 protein. Length = 607 Score = 37.1 bits (82), Expect = 0.013 Identities = 15/34 (44%), Positives = 26/34 (76%) Frame = +1 Query: 1 DMLIIMGSSLEVQPFASLIDMVPDSCPRLLINRE 102 D+++++GSSL+V+P A + V + P++LINRE Sbjct: 321 DLIVVIGSSLKVRPVALIPHCVDKNVPQILINRE 354 >Z81568-4|CAB04596.1| 509|Caenorhabditis elegans Hypothetical protein K08E3.5a protein. Length = 509 Score = 29.5 bits (63), Expect = 2.6 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Frame = -3 Query: 242 PSLSAKSWQPSSQSPSLATSL*EPS---SNCKPPHINPLILNIGGLTPAFSRFIRSR 81 P S++ W+ S++ +L + E + S CKP +N + G F+RF+R++ Sbjct: 16 PDESSEEWKTSTKLEALGSMEGELAHLLSTCKPETLNHNKTELSGFRNLFARFLRAK 72 >U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical protein K06A9.1c protein. Length = 825 Score = 29.1 bits (62), Expect = 3.5 Identities = 21/70 (30%), Positives = 29/70 (41%) Frame = -3 Query: 260 SKSSPHPSLSAKSWQPSSQSPSLATSL*EPSSNCKPPHINPLILNIGGLTPAFSRFIRSR 81 S SSP PS + + S +PS TS PS + P P + +TP S Sbjct: 385 SSSSPQPSSQSPAPNTGSTTPS-QTSSQSPSPSMNPSSSTPTGSSQSTITPEGSTASSPT 443 Query: 80 GHESGTISIS 51 G T S++ Sbjct: 444 GSTGSTFSVA 453 >U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical protein K06A9.1a protein. Length = 1032 Score = 29.1 bits (62), Expect = 3.5 Identities = 21/70 (30%), Positives = 29/70 (41%) Frame = -3 Query: 260 SKSSPHPSLSAKSWQPSSQSPSLATSL*EPSSNCKPPHINPLILNIGGLTPAFSRFIRSR 81 S SSP PS + + S +PS TS PS + P P + +TP S Sbjct: 592 SSSSPQPSSQSPAPNTGSTTPS-QTSSQSPSPSMNPSSSTPTGSSQSTITPEGSTASSPT 650 Query: 80 GHESGTISIS 51 G T S++ Sbjct: 651 GSTGSTFSVA 660 >U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein K06A9.1b protein. Length = 2232 Score = 29.1 bits (62), Expect = 3.5 Identities = 21/70 (30%), Positives = 29/70 (41%) Frame = -3 Query: 260 SKSSPHPSLSAKSWQPSSQSPSLATSL*EPSSNCKPPHINPLILNIGGLTPAFSRFIRSR 81 S SSP PS + + S +PS TS PS + P P + +TP S Sbjct: 592 SSSSPQPSSQSPAPNTGSTTPS-QTSSQSPSPSMNPSSSTPTGSSQSTITPEGSTASSPT 650 Query: 80 GHESGTISIS 51 G T S++ Sbjct: 651 GSTGSTFSVA 660 >Z81568-8|CAD89739.1| 496|Caenorhabditis elegans Hypothetical protein K08E3.5e protein. Length = 496 Score = 28.7 bits (61), Expect = 4.6 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Frame = -3 Query: 242 PSLSAKSWQPSSQSPSLATSL*EPS---SNCKPPHINPLILNIGGLTPAFSRFIRSR 81 P S++ W+ S++ +L + E + S CKP +N + G F+RF+R++ Sbjct: 3 PFPSSEEWKTSTKLEALGSMEGELAHLLSTCKPETLNHNKTELSGFRNLFARFLRAK 59 >Z81568-12|CAH10810.1| 493|Caenorhabditis elegans Hypothetical protein K08E3.5f protein. Length = 493 Score = 27.9 bits (59), Expect = 8.0 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%) Frame = -3 Query: 233 SAKSWQPSSQSPSLATSL*EPS---SNCKPPHINPLILNIGGLTPAFSRFIRSR 81 S++ W+ S++ +L + E + S CKP +N + G F+RF+R++ Sbjct: 3 SSEEWKTSTKLEALGSMEGELAHLLSTCKPETLNHNKTELSGFRNLFARFLRAK 56 >Z81568-7|CAD18874.1| 497|Caenorhabditis elegans Hypothetical protein K08E3.5d protein. Length = 497 Score = 27.9 bits (59), Expect = 8.0 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%) Frame = -3 Query: 233 SAKSWQPSSQSPSLATSL*EPS---SNCKPPHINPLILNIGGLTPAFSRFIRSR 81 S++ W+ S++ +L + E + S CKP +N + G F+RF+R++ Sbjct: 32 SSEEWKTSTKLEALGSMEGELAHLLSTCKPETLNHNKTELSGFRNLFARFLRAK 85 >Z81568-6|CAB04598.1| 511|Caenorhabditis elegans Hypothetical protein K08E3.5c protein. Length = 511 Score = 27.9 bits (59), Expect = 8.0 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%) Frame = -3 Query: 233 SAKSWQPSSQSPSLATSL*EPS---SNCKPPHINPLILNIGGLTPAFSRFIRSR 81 S++ W+ S++ +L + E + S CKP +N + G F+RF+R++ Sbjct: 21 SSEEWKTSTKLEALGSMEGELAHLLSTCKPETLNHNKTELSGFRNLFARFLRAK 74 >Z81568-5|CAB04597.1| 522|Caenorhabditis elegans Hypothetical protein K08E3.5b protein. Length = 522 Score = 27.9 bits (59), Expect = 8.0 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%) Frame = -3 Query: 233 SAKSWQPSSQSPSLATSL*EPS---SNCKPPHINPLILNIGGLTPAFSRFIRSR 81 S++ W+ S++ +L + E + S CKP +N + G F+RF+R++ Sbjct: 32 SSEEWKTSTKLEALGSMEGELAHLLSTCKPETLNHNKTELSGFRNLFARFLRAK 85 >AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily assigned gene nameprotein 80 protein. Length = 4900 Score = 27.9 bits (59), Expect = 8.0 Identities = 16/48 (33%), Positives = 23/48 (47%) Frame = -1 Query: 367 EALGPAFASEGISTGAWGDAVNSSWSKRSCSRATNARSHPPIPVCLPS 224 E+ P E I AW + SS + S +A+ PP+PV LP+ Sbjct: 741 ESKEPELTQEEIDHIAW---IQSSAEQSSFEQASTVPDRPPLPVRLPT 785 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,398,642 Number of Sequences: 27780 Number of extensions: 339932 Number of successful extensions: 1025 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 953 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1025 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1756472266 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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