Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1603
         (745 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g21340.2 68415.m02540 enhanced disease susceptibility protein...    30   1.9  
At2g21340.1 68415.m02539 enhanced disease susceptibility protein...    30   1.9  
At2g40070.1 68415.m04923 expressed protein                             28   5.7  
At1g13080.1 68414.m01516 cytochrome P450 family protein identica...    28   5.7  
At3g47060.1 68416.m05110 FtsH protease, putative contains simila...    28   7.5  
At4g27520.1 68417.m03952 plastocyanin-like domain-containing pro...    27   9.9  

>At2g21340.2 68415.m02540 enhanced disease susceptibility protein,
           putative / salicylic acid induction deficient protein,
           putative similar to enhanced disease susceptibility 5
           [Arabidopsis thaliana] GI:16589070
          Length = 552

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
 Frame = -1

Query: 349 FASEGISTGAWGDAVNSSWSKRSCSRATNARSHPPIPVCLPSPGSLHHNL-LASPHLYRN 173
           F   GI+  AW   V+   +      A N + +     C+PSP  L     LA+P ++  
Sbjct: 284 FLGYGIAGAAWATMVSQVVAAYMMMDALNKKGYSAFSFCVPSPSELLTIFGLAAP-VFIT 342

Query: 172 LRLTVNLHTLILLFS 128
           +   V  +TL++ F+
Sbjct: 343 MMSKVLFYTLLVYFA 357


>At2g21340.1 68415.m02539 enhanced disease susceptibility protein,
           putative / salicylic acid induction deficient protein,
           putative similar to enhanced disease susceptibility 5
           [Arabidopsis thaliana] GI:16589070
          Length = 555

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
 Frame = -1

Query: 349 FASEGISTGAWGDAVNSSWSKRSCSRATNARSHPPIPVCLPSPGSLHHNL-LASPHLYRN 173
           F   GI+  AW   V+   +      A N + +     C+PSP  L     LA+P ++  
Sbjct: 287 FLGYGIAGAAWATMVSQVVAAYMMMDALNKKGYSAFSFCVPSPSELLTIFGLAAP-VFIT 345

Query: 172 LRLTVNLHTLILLFS 128
           +   V  +TL++ F+
Sbjct: 346 MMSKVLFYTLLVYFA 360


>At2g40070.1 68415.m04923 expressed protein
          Length = 607

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
 Frame = -3

Query: 257 KSSPHPSLSAKSWQPSS-------QSPSLATSL*EPS-SNCKPPHINPLILNIGGLTPAF 102
           K SPH +LSAKS  P S          SL  ++         P ++ PL+ NI    PA 
Sbjct: 485 KGSPHGNLSAKSSSPDSAGFGRTLSKKSLDMAIRHMDIRRTIPGNLRPLMTNI----PAS 540

Query: 101 SRFIRSRGHESG-TISISDANGCTSSED 21
           S +    GH  G  +++SD++   +S +
Sbjct: 541 SMYSVRSGHTRGRPMNVSDSSPLATSSN 568


>At1g13080.1 68414.m01516 cytochrome P450 family protein identical
           to gb|D78605 cytochrome P450 monooxygenase from
           Arabidopsis thaliana and is a member of the PF|00067
           Cytochrome P450 family. ESTs gb|Z18072, gb|Z35218 and
           gb|T43466 come from this gene
          Length = 502

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
 Frame = -1

Query: 250 PPIPVCLPSPGSLHHNLLASPH-LYRNLRLTVNLHTLILLFSI*VVSRRPSHGLSEVEDT 74
           PP P  LP  G+LHH L   PH  +  L +       + L S+ VV    S     V  T
Sbjct: 32  PPSPSSLPIIGNLHH-LAGLPHRCFHKLSIKYGPLVFLRLGSVPVVVISSSEAAEAVLKT 90

Query: 73  N 71
           N
Sbjct: 91  N 91


>At3g47060.1 68416.m05110 FtsH protease, putative contains
           similarity to FtsH protease GI:13183728 from [Medicago
           sativa]
          Length = 802

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +3

Query: 45  CITYRYGP-RFVSSTSDKP*EGRRETTYIENKRINVW 152
           C  YR  P RFVS++   P + ++ T    ++R N+W
Sbjct: 37  CRVYRQNPNRFVSNSITLPLQKKQVTVLRNHERFNLW 73


>At4g27520.1 68417.m03952 plastocyanin-like domain-containing
           protein similar to PIR|JC7196 phytocyanin-related
           protein Pn14 {Ipomoea nil}; contains Pfam profile
           PF02298: Plastocyanin-like domain
          Length = 349

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
 Frame = -3

Query: 254 SSPHPSLSAKSWQPSSQSPSLATSL*EPSSNCKPPHINPLILNIG--GLTPAFSRFIRSR 81
           +SP  S++ KS  P S SP+++ SL    S    P  +P    +G  G  P+ +  I + 
Sbjct: 257 TSPPGSMAPKSSSPVSNSPTVSPSLAPGGSTSSSPSDSPSGSAMGPSGDGPSAAGDISTP 316

Query: 80  GHESGTISISDANGCTSSEDPIIMSM 3
               G    S ANG T      ++S+
Sbjct: 317 AGAPGQ-KKSSANGMTVMSITTVLSL 341


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,406,507
Number of Sequences: 28952
Number of extensions: 313543
Number of successful extensions: 892
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 890
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1643603136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)