Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1602
         (764 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L...    42   0.017
UniRef50_Q32RR9 Cluster: Cell division protein; n=1; Staurastrum...    36   0.83 

>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep:
          Like moricin - Manduca sexta (Tobacco hawkmoth)
          (Tobacco hornworm)
          Length = 248

 Score = 41.9 bits (94), Expect = 0.017
 Identities = 20/29 (68%), Positives = 22/29 (75%)
 Frame = +2

Query: 11 MGDGNHLPSGGPYARLPTKAIKNKLDFVF 97
          MGDGNH PSG PYA LPT+A K KL  +F
Sbjct: 1  MGDGNHSPSGRPYASLPTRA-KMKLTSLF 28


>UniRef50_Q32RR9 Cluster: Cell division protein; n=1; Staurastrum
           punctulatum|Rep: Cell division protein - Staurastrum
           punctulatum (Green alga)
          Length = 1750

 Score = 36.3 bits (80), Expect = 0.83
 Identities = 20/52 (38%), Positives = 30/52 (57%)
 Frame = +3

Query: 168 KRTKISIGLFHSVPFLYVFSV*EL*SMFSKNTHFLSWVFIILKV*CHIFFVN 323
           K ++ +I LF ++PF+  F V E+     K T +L   F++L V   IFFVN
Sbjct: 90  KNSRSTILLFFNIPFILSFLVSEIFESIIKKTIYLYRFFLLLSVPVLIFFVN 141


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 690,941,851
Number of Sequences: 1657284
Number of extensions: 12783092
Number of successful extensions: 25266
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 24576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25261
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63792713725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)