BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1602 (764 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette... 25 3.4 U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette... 25 3.4 U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette... 25 3.4 AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking p... 25 3.4 AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 25 3.4 >U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette protein protein. Length = 695 Score = 24.6 bits (51), Expect = 3.4 Identities = 12/43 (27%), Positives = 24/43 (55%) Frame = +3 Query: 171 RTKISIGLFHSVPFLYVFSV*EL*SMFSKNTHFLSWVFIILKV 299 +T + LF +VPF++ + + + TH+L+ +FI+ V Sbjct: 519 KTIAELPLFIAVPFVFTSITYPMIGLRTGATHYLTTLFIVTLV 561 >U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette protein protein. Length = 695 Score = 24.6 bits (51), Expect = 3.4 Identities = 12/43 (27%), Positives = 24/43 (55%) Frame = +3 Query: 171 RTKISIGLFHSVPFLYVFSV*EL*SMFSKNTHFLSWVFIILKV 299 +T + LF +VPF++ + + + TH+L+ +FI+ V Sbjct: 519 KTIAELPLFIAVPFVFTSITYPMIGLRTGATHYLTTLFIVTLV 561 >U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette protein protein. Length = 673 Score = 24.6 bits (51), Expect = 3.4 Identities = 12/43 (27%), Positives = 24/43 (55%) Frame = +3 Query: 171 RTKISIGLFHSVPFLYVFSV*EL*SMFSKNTHFLSWVFIILKV 299 +T + LF +VPF++ + + + TH+L+ +FI+ V Sbjct: 497 KTIAELPLFIAVPFVFTSITYPMIGLRTGATHYLTTLFIVTLV 539 >AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking protein. Length = 932 Score = 24.6 bits (51), Expect = 3.4 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = -1 Query: 173 PFISYLWSFDY*KSLKRVVL 114 PF LW+FD K++ RVV+ Sbjct: 94 PFCYTLWTFDIVKNVTRVVV 113 >AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase protein. Length = 988 Score = 24.6 bits (51), Expect = 3.4 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = +2 Query: 50 ARLPTKAIKNKLDFVFNSKIDLERP 124 AR+P + NKL F+ N ++ LERP Sbjct: 369 ARVPMERDANKLQFIVN-ELFLERP 392 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 731,663 Number of Sequences: 2352 Number of extensions: 14248 Number of successful extensions: 15 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 15 length of database: 563,979 effective HSP length: 63 effective length of database: 415,803 effective search space used: 79418373 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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