Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1602
         (764 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    25   3.4  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    25   3.4  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    25   3.4  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    25   3.4  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    25   3.4  

>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 12/43 (27%), Positives = 24/43 (55%)
 Frame = +3

Query: 171 RTKISIGLFHSVPFLYVFSV*EL*SMFSKNTHFLSWVFIILKV 299
           +T   + LF +VPF++      +  + +  TH+L+ +FI+  V
Sbjct: 519 KTIAELPLFIAVPFVFTSITYPMIGLRTGATHYLTTLFIVTLV 561


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 12/43 (27%), Positives = 24/43 (55%)
 Frame = +3

Query: 171 RTKISIGLFHSVPFLYVFSV*EL*SMFSKNTHFLSWVFIILKV 299
           +T   + LF +VPF++      +  + +  TH+L+ +FI+  V
Sbjct: 519 KTIAELPLFIAVPFVFTSITYPMIGLRTGATHYLTTLFIVTLV 561


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 12/43 (27%), Positives = 24/43 (55%)
 Frame = +3

Query: 171 RTKISIGLFHSVPFLYVFSV*EL*SMFSKNTHFLSWVFIILKV 299
           +T   + LF +VPF++      +  + +  TH+L+ +FI+  V
Sbjct: 497 KTIAELPLFIAVPFVFTSITYPMIGLRTGATHYLTTLFIVTLV 539


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1

Query: 173 PFISYLWSFDY*KSLKRVVL 114
           PF   LW+FD  K++ RVV+
Sbjct: 94  PFCYTLWTFDIVKNVTRVVV 113


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 50  ARLPTKAIKNKLDFVFNSKIDLERP 124
           AR+P +   NKL F+ N ++ LERP
Sbjct: 369 ARVPMERDANKLQFIVN-ELFLERP 392


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 731,663
Number of Sequences: 2352
Number of extensions: 14248
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)