BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1601 (805 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g56490.1 68416.m06282 zinc-binding protein, putative / protei... 88 6e-18 At1g31160.1 68414.m03812 zinc-binding protein, putative / protei... 87 1e-17 At4g16566.1 68417.m02507 histidine triad family protein / HIT fa... 48 6e-06 At5g48545.1 68418.m06002 histidine triad family protein / HIT fa... 48 1e-05 At5g58240.2 68418.m07291 bis(5'-adenosyl)-triphosphatase, putati... 42 6e-04 At5g58240.1 68418.m07292 bis(5'-adenosyl)-triphosphatase, putati... 42 6e-04 At4g24040.1 68417.m03454 glycosyl hydrolase family protein 37 / ... 29 3.6 At4g20070.1 68417.m02936 peptidase M20/M25/M40 family protein co... 28 6.3 At4g00340.1 68417.m00045 S-locus glycoprotein family protein / c... 28 6.3 >At3g56490.1 68416.m06282 zinc-binding protein, putative / protein kinase C inhibitor, putative similar to 14 kDa zinc-binding protein (Protein kinase C inhibitor, PKCI) [Zea mays] Swiss-Prot:P42856 Length = 147 Score = 88.2 bits (209), Expect = 6e-18 Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 3/88 (3%) Frame = +3 Query: 255 DDLCLAFNDIAPQAPVHFLVIPKRR--IARLQDAENNDNELLGHLMLVARSLGAQRA-PS 425 DD LAF DI PQ PVH L+IPK R + L AE ++LG L+ A+ + Q Sbjct: 54 DDKVLAFRDITPQGPVHILLIPKVRDGLTGLSKAEERHIDILGRLLYTAKLVAKQEGLAE 113 Query: 426 GWRLVVNNGKDGAQSVYHLHLHVLGGRQ 509 G+R+V+N+G G QSVYH+H+H++GGRQ Sbjct: 114 GFRIVINDGPQGCQSVYHIHVHLIGGRQ 141 Score = 34.7 bits (76), Expect = 0.073 Identities = 16/34 (47%), Positives = 22/34 (64%) Frame = +1 Query: 154 SDEVRRAHETTTTIGPTIFDKIISKEIRADIIYE 255 + E A T + PTIFDKIISKEI + +++E Sbjct: 20 ASEKEAALAATPSDSPTIFDKIISKEIPSTVVFE 53 >At1g31160.1 68414.m03812 zinc-binding protein, putative / protein kinase C inhibitor, putative similar to 14 kDa zinc-binding protein (Protein kinase C inhibitor, PKCI) [Zea mays] Swiss-Prot:P42856 Length = 187 Score = 87.0 bits (206), Expect = 1e-17 Identities = 46/88 (52%), Positives = 58/88 (65%), Gaps = 3/88 (3%) Frame = +3 Query: 255 DDLCLAFNDIAPQAPVHFLVIPKRR--IARLQDAENNDNELLGHLMLVARSLGAQRAP-S 425 D+ LAF DI PQAPVH LVIPK R + L AE E+LG L+ ++ + + Sbjct: 94 DENVLAFRDINPQAPVHVLVIPKLRDGLTSLGKAEPRHVEVLGQLLHASKIVAEKEGILD 153 Query: 426 GWRLVVNNGKDGAQSVYHLHLHVLGGRQ 509 G+R+V+NNG + QSVYHLHLHVLGGRQ Sbjct: 154 GFRVVINNGVEACQSVYHLHLHVLGGRQ 181 Score = 38.3 bits (85), Expect = 0.006 Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 2/51 (3%) Frame = +1 Query: 109 YDLSRGSAVAVKRPYSDEV--RRAHETTTTIGPTIFDKIISKEIRADIIYE 255 Y S+ + + +++E + A T PTIFDKII+KEI +DI+YE Sbjct: 43 YTRSKRLICSTRAAHNEEAAAKAAASVADTGAPTIFDKIIAKEIPSDIVYE 93 >At4g16566.1 68417.m02507 histidine triad family protein / HIT family protein contains Pfam domain, PF01230: HIT family (histidine triad protein family) Length = 146 Score = 48.4 bits (110), Expect = 6e-06 Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 2/81 (2%) Frame = +3 Query: 255 DDLCLAFNDIAPQAPVHFLVIPKRRIARLQDAENNDNE--LLGHLMLVARSLGAQRAPSG 428 D+ +AF DI P A H+LVIPK I + D + D + L+ H++ V + L + AP Sbjct: 26 DEKVIAFQDIKPAAQRHYLVIPKEHIPTVNDLQRRDEDYSLVRHMLSVGQQLLQKDAPQS 85 Query: 429 WRLVVNNGKDGAQSVYHLHLH 491 + SV HLHLH Sbjct: 86 IHR-FGFHQPPFNSVDHLHLH 105 >At5g48545.1 68418.m06002 histidine triad family protein / HIT family protein contains Pfam profile PF01230:HIT domain; contains Prosite motif PS00892: HIT family signature. Length = 197 Score = 47.6 bits (108), Expect = 1e-05 Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 1/82 (1%) Frame = +3 Query: 255 DDLCLAFNDIAPQAPVHFLVIPKRRIARLQDAENND-NELLGHLMLVARSLGAQRAPSGW 431 DD+CL D P + H L+IPK L++ + + + L++ ++ + Sbjct: 68 DDMCLCILDTNPLSHGHSLIIPKLHYPTLEETPPSVVAAMCSKVPLISNAIVKATGSDSF 127 Query: 432 RLVVNNGKDGAQSVYHLHLHVL 497 L+VNNG Q ++H H+H++ Sbjct: 128 NLLVNNGAAAGQVIFHTHIHII 149 >At5g58240.2 68418.m07291 bis(5'-adenosyl)-triphosphatase, putative similar to bis(5'-adenosyl)-triphosphatase (Diadenosine 5',5'''- P1,P3-triphosphate hydrolase, Dinucleosidetriphosphatase, AP3A hydrolase, AP3AASE, Fragile histidine triad protein) [Homo sapiens] Swiss-Prot:P49789 Length = 160 Score = 41.5 bits (93), Expect = 6e-04 Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 4/83 (4%) Frame = +3 Query: 261 LCLAFNDIAPQAPVHFLVIPKRRIARLQDAENNDNELLGHLMLVARSLGAQ----RAPSG 428 L A ++ P P H LV P+R + R D ++ L L A+ +G++ S Sbjct: 26 LSYAMVNLRPLLPAHVLVCPRRLVPRFTDLTADETS---DLWLTAQKVGSKLETFHNASS 82 Query: 429 WRLVVNNGKDGAQSVYHLHLHVL 497 L + +G Q+V H+H+H+L Sbjct: 83 LTLAIQDGPQAGQTVPHVHIHIL 105 >At5g58240.1 68418.m07292 bis(5'-adenosyl)-triphosphatase, putative similar to bis(5'-adenosyl)-triphosphatase (Diadenosine 5',5'''- P1,P3-triphosphate hydrolase, Dinucleosidetriphosphatase, AP3A hydrolase, AP3AASE, Fragile histidine triad protein) [Homo sapiens] Swiss-Prot:P49789 Length = 180 Score = 41.5 bits (93), Expect = 6e-04 Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 4/83 (4%) Frame = +3 Query: 261 LCLAFNDIAPQAPVHFLVIPKRRIARLQDAENNDNELLGHLMLVARSLGAQ----RAPSG 428 L A ++ P P H LV P+R + R D ++ L L A+ +G++ S Sbjct: 46 LSYAMVNLRPLLPAHVLVCPRRLVPRFTDLTADETS---DLWLTAQKVGSKLETFHNASS 102 Query: 429 WRLVVNNGKDGAQSVYHLHLHVL 497 L + +G Q+V H+H+H+L Sbjct: 103 LTLAIQDGPQAGQTVPHVHIHIL 125 >At4g24040.1 68417.m03454 glycosyl hydrolase family protein 37 / trehalase, putative similar to trehalase 1 GMTRE1 GI:4559292 from [Glycine max] Length = 626 Score = 29.1 bits (62), Expect = 3.6 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = +1 Query: 4 YDYNGVYLLVSTKMFNKVFQRALKFRLKKTYPTNIY 111 Y N LL+ST NK+F + F L ++P+ IY Sbjct: 4 YKLNNPNLLISTHTHNKLFLSSSPFNLLFSFPSFIY 39 >At4g20070.1 68417.m02936 peptidase M20/M25/M40 family protein contains similarity to hydantoin utilization protein C [Pseudomonas sp.] SWISS-PROT:Q01264; contains Pfam profile PF01546: Peptidase family M20/M25/M40 Length = 525 Score = 28.3 bits (60), Expect = 6.3 Identities = 9/14 (64%), Positives = 12/14 (85%) Frame = +1 Query: 496 WVEDNGLATWVSYI 537 W+ED GL+TWV Y+ Sbjct: 132 WMEDAGLSTWVDYM 145 >At4g00340.1 68417.m00045 S-locus glycoprotein family protein / curculin-like (mannose-binding) lectin family protein / PAN domain-containing protein contains Pfam profiles: PF01453 lectin (probable mannose binding), PF00954 S-locus glycoprotein family, PF00024 PAN domain Length = 402 Score = 28.3 bits (60), Expect = 6.3 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Frame = +1 Query: 421 LQDGVLWLTMAK---TELKVFIIYTFMFWVEDNGLATWVSYINCCKLWLKKMHKIG 579 L+DGV+W T K T+ + F + + D+G W S+ N WL M+ G Sbjct: 99 LRDGVVWQTDNKQPGTDFR-FSETGNLILINDDGSPVWQSFDNPTDTWLPGMNVTG 153 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,923,981 Number of Sequences: 28952 Number of extensions: 348154 Number of successful extensions: 835 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 811 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 830 length of database: 12,070,560 effective HSP length: 80 effective length of database: 9,754,400 effective search space used: 1824072800 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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