Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1601
(805 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g56490.1 68416.m06282 zinc-binding protein, putative / protei... 88 6e-18
At1g31160.1 68414.m03812 zinc-binding protein, putative / protei... 87 1e-17
At4g16566.1 68417.m02507 histidine triad family protein / HIT fa... 48 6e-06
At5g48545.1 68418.m06002 histidine triad family protein / HIT fa... 48 1e-05
At5g58240.2 68418.m07291 bis(5'-adenosyl)-triphosphatase, putati... 42 6e-04
At5g58240.1 68418.m07292 bis(5'-adenosyl)-triphosphatase, putati... 42 6e-04
At4g24040.1 68417.m03454 glycosyl hydrolase family protein 37 / ... 29 3.6
At4g20070.1 68417.m02936 peptidase M20/M25/M40 family protein co... 28 6.3
At4g00340.1 68417.m00045 S-locus glycoprotein family protein / c... 28 6.3
>At3g56490.1 68416.m06282 zinc-binding protein, putative / protein
kinase C inhibitor, putative similar to 14 kDa
zinc-binding protein (Protein kinase C inhibitor, PKCI)
[Zea mays] Swiss-Prot:P42856
Length = 147
Score = 88.2 bits (209), Expect = 6e-18
Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 DDLCLAFNDIAPQAPVHFLVIPKRR--IARLQDAENNDNELLGHLMLVARSLGAQRA-PS 425
DD LAF DI PQ PVH L+IPK R + L AE ++LG L+ A+ + Q
Sbjct: 54 DDKVLAFRDITPQGPVHILLIPKVRDGLTGLSKAEERHIDILGRLLYTAKLVAKQEGLAE 113
Query: 426 GWRLVVNNGKDGAQSVYHLHLHVLGGRQ 509
G+R+V+N+G G QSVYH+H+H++GGRQ
Sbjct: 114 GFRIVINDGPQGCQSVYHIHVHLIGGRQ 141
Score = 34.7 bits (76), Expect = 0.073
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +1
Query: 154 SDEVRRAHETTTTIGPTIFDKIISKEIRADIIYE 255
+ E A T + PTIFDKIISKEI + +++E
Sbjct: 20 ASEKEAALAATPSDSPTIFDKIISKEIPSTVVFE 53
>At1g31160.1 68414.m03812 zinc-binding protein, putative / protein
kinase C inhibitor, putative similar to 14 kDa
zinc-binding protein (Protein kinase C inhibitor, PKCI)
[Zea mays] Swiss-Prot:P42856
Length = 187
Score = 87.0 bits (206), Expect = 1e-17
Identities = 46/88 (52%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 DDLCLAFNDIAPQAPVHFLVIPKRR--IARLQDAENNDNELLGHLMLVARSLGAQRAP-S 425
D+ LAF DI PQAPVH LVIPK R + L AE E+LG L+ ++ + +
Sbjct: 94 DENVLAFRDINPQAPVHVLVIPKLRDGLTSLGKAEPRHVEVLGQLLHASKIVAEKEGILD 153
Query: 426 GWRLVVNNGKDGAQSVYHLHLHVLGGRQ 509
G+R+V+NNG + QSVYHLHLHVLGGRQ
Sbjct: 154 GFRVVINNGVEACQSVYHLHLHVLGGRQ 181
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = +1
Query: 109 YDLSRGSAVAVKRPYSDEV--RRAHETTTTIGPTIFDKIISKEIRADIIYE 255
Y S+ + + +++E + A T PTIFDKII+KEI +DI+YE
Sbjct: 43 YTRSKRLICSTRAAHNEEAAAKAAASVADTGAPTIFDKIIAKEIPSDIVYE 93
>At4g16566.1 68417.m02507 histidine triad family protein / HIT
family protein contains Pfam domain, PF01230: HIT family
(histidine triad protein family)
Length = 146
Score = 48.4 bits (110), Expect = 6e-06
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +3
Query: 255 DDLCLAFNDIAPQAPVHFLVIPKRRIARLQDAENNDNE--LLGHLMLVARSLGAQRAPSG 428
D+ +AF DI P A H+LVIPK I + D + D + L+ H++ V + L + AP
Sbjct: 26 DEKVIAFQDIKPAAQRHYLVIPKEHIPTVNDLQRRDEDYSLVRHMLSVGQQLLQKDAPQS 85
Query: 429 WRLVVNNGKDGAQSVYHLHLH 491
+ SV HLHLH
Sbjct: 86 IHR-FGFHQPPFNSVDHLHLH 105
>At5g48545.1 68418.m06002 histidine triad family protein / HIT
family protein contains Pfam profile PF01230:HIT domain;
contains Prosite motif PS00892: HIT family signature.
Length = 197
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +3
Query: 255 DDLCLAFNDIAPQAPVHFLVIPKRRIARLQDAENND-NELLGHLMLVARSLGAQRAPSGW 431
DD+CL D P + H L+IPK L++ + + + L++ ++ +
Sbjct: 68 DDMCLCILDTNPLSHGHSLIIPKLHYPTLEETPPSVVAAMCSKVPLISNAIVKATGSDSF 127
Query: 432 RLVVNNGKDGAQSVYHLHLHVL 497
L+VNNG Q ++H H+H++
Sbjct: 128 NLLVNNGAAAGQVIFHTHIHII 149
>At5g58240.2 68418.m07291 bis(5'-adenosyl)-triphosphatase, putative
similar to bis(5'-adenosyl)-triphosphatase (Diadenosine
5',5'''- P1,P3-triphosphate hydrolase,
Dinucleosidetriphosphatase, AP3A hydrolase, AP3AASE,
Fragile histidine triad protein) [Homo sapiens]
Swiss-Prot:P49789
Length = 160
Score = 41.5 bits (93), Expect = 6e-04
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Frame = +3
Query: 261 LCLAFNDIAPQAPVHFLVIPKRRIARLQDAENNDNELLGHLMLVARSLGAQ----RAPSG 428
L A ++ P P H LV P+R + R D ++ L L A+ +G++ S
Sbjct: 26 LSYAMVNLRPLLPAHVLVCPRRLVPRFTDLTADETS---DLWLTAQKVGSKLETFHNASS 82
Query: 429 WRLVVNNGKDGAQSVYHLHLHVL 497
L + +G Q+V H+H+H+L
Sbjct: 83 LTLAIQDGPQAGQTVPHVHIHIL 105
>At5g58240.1 68418.m07292 bis(5'-adenosyl)-triphosphatase, putative
similar to bis(5'-adenosyl)-triphosphatase (Diadenosine
5',5'''- P1,P3-triphosphate hydrolase,
Dinucleosidetriphosphatase, AP3A hydrolase, AP3AASE,
Fragile histidine triad protein) [Homo sapiens]
Swiss-Prot:P49789
Length = 180
Score = 41.5 bits (93), Expect = 6e-04
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Frame = +3
Query: 261 LCLAFNDIAPQAPVHFLVIPKRRIARLQDAENNDNELLGHLMLVARSLGAQ----RAPSG 428
L A ++ P P H LV P+R + R D ++ L L A+ +G++ S
Sbjct: 46 LSYAMVNLRPLLPAHVLVCPRRLVPRFTDLTADETS---DLWLTAQKVGSKLETFHNASS 102
Query: 429 WRLVVNNGKDGAQSVYHLHLHVL 497
L + +G Q+V H+H+H+L
Sbjct: 103 LTLAIQDGPQAGQTVPHVHIHIL 125
>At4g24040.1 68417.m03454 glycosyl hydrolase family protein 37 /
trehalase, putative similar to trehalase 1 GMTRE1
GI:4559292 from [Glycine max]
Length = 626
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 4 YDYNGVYLLVSTKMFNKVFQRALKFRLKKTYPTNIY 111
Y N LL+ST NK+F + F L ++P+ IY
Sbjct: 4 YKLNNPNLLISTHTHNKLFLSSSPFNLLFSFPSFIY 39
>At4g20070.1 68417.m02936 peptidase M20/M25/M40 family protein
contains similarity to hydantoin utilization protein C
[Pseudomonas sp.] SWISS-PROT:Q01264; contains Pfam
profile PF01546: Peptidase family M20/M25/M40
Length = 525
Score = 28.3 bits (60), Expect = 6.3
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +1
Query: 496 WVEDNGLATWVSYI 537
W+ED GL+TWV Y+
Sbjct: 132 WMEDAGLSTWVDYM 145
>At4g00340.1 68417.m00045 S-locus glycoprotein family protein /
curculin-like (mannose-binding) lectin family protein /
PAN domain-containing protein contains Pfam profiles:
PF01453 lectin (probable mannose binding), PF00954
S-locus glycoprotein family, PF00024 PAN domain
Length = 402
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = +1
Query: 421 LQDGVLWLTMAK---TELKVFIIYTFMFWVEDNGLATWVSYINCCKLWLKKMHKIG 579
L+DGV+W T K T+ + F + + D+G W S+ N WL M+ G
Sbjct: 99 LRDGVVWQTDNKQPGTDFR-FSETGNLILINDDGSPVWQSFDNPTDTWLPGMNVTG 153
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,923,981
Number of Sequences: 28952
Number of extensions: 348154
Number of successful extensions: 835
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1824072800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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