Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1597
         (627 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.22 
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   3.7  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   6.4  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   8.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 26.2 bits (55), Expect = 0.22
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 509  MCWFTNWCLKNLGFGSC*TVKNIHRAQRSH*VYGFS 616
            +C+FTNW     G G     ++I     +H VYGF+
Sbjct: 1401 VCYFTNWAWYRKGLGKY-LPEDIDPDLCTHIVYGFA 1435



 Score = 25.4 bits (53), Expect = 0.39
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 509  MCWFTNWCLKNLGFGSC*TVKNIHRAQRSH*VYGFS 616
            +C+FTNW     G G      +I     +H VYGF+
Sbjct: 1826 VCYFTNWAWYRQGVGKY-LPSDIDPDLCTHIVYGFA 1860



 Score = 23.0 bits (47), Expect = 2.1
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +2

Query: 509  MCWFTNWCLKNLGFGSC*TVKNIHRAQRSH*VYGFS 616
            +C+FTNW     G G      +I  +  +H  YGF+
Sbjct: 2324 VCYFTNWAWYRQGDGKY-LPSDIDPSLCTHINYGFA 2358


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +2

Query: 509 MCWFTNWCLKNLGFG 553
           +C+F+NW +   G G
Sbjct: 25  VCYFSNWAIYRPGIG 39


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -2

Query: 251 RISSFKTINVWVTIFINKI*EYCAEKI 171
           R++S     +W +I I K   +C +K+
Sbjct: 295 RVASEDFKAIWYSILIKKADSFCKKKL 321


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +1

Query: 160 IARNIFSAQYSQILFINIVTQTLIVLKLEILLWSS 264
           IA  +F AQY+  +   +       L   +++WSS
Sbjct: 387 IAMKLFWAQYTNKMIDRLKNANNNELPEHVIMWSS 421


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,738
Number of Sequences: 336
Number of extensions: 3471
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)