Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1597
         (627 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    26   1.1  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   7.9  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -3

Query: 562 LAASKSQIFKAPVCEPAHLSL 500
           L    SQ  + PVCEP HL L
Sbjct: 804 LLVRHSQSDEVPVCEPGHLKL 824


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
            transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 16/54 (29%), Positives = 21/54 (38%)
 Frame = +1

Query: 190  SQILFINIVTQTLIVLKLEILLWSSRNNLLITMEATRRSWKLQEFVAHKANVNC 351
            S I  I  + + L    L +L W  RNN L    A  R   L+     + N  C
Sbjct: 913  SSIARIEAIQRKLTRYALRLLPWQDRNN-LPPYAARCRLLGLEPLSVRRRNAQC 965


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 665,028
Number of Sequences: 2352
Number of extensions: 12954
Number of successful extensions: 15
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)