Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1593X
         (591 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   2.6  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   2.6  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   5.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.8  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 77  ILPCSFYRKQKEICNVYTSI 136
           +LP  F +  K+ C+VYT+I
Sbjct: 1   MLPKQFLKLFKDPCDVYTAI 20


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 77  ILPCSFYRKQKEICNVYTSI 136
           +LP  F +  K+ C+VYT+I
Sbjct: 1   MLPKQFLKLFKDPCDVYTAI 20


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +2

Query: 20  KINSIWYWWILVHIISITE 76
           K+N++   W++ H+ +I E
Sbjct: 444 KLNALCMTWLMDHVFAIRE 462


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 145 FSCYRSINVTYFFLLSI 95
           F CY    + YF+ +SI
Sbjct: 48  FKCYNLRRIYYFYCVSI 64


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,975
Number of Sequences: 336
Number of extensions: 2866
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)