Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1593X
         (591 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023378-1|AAY55794.1|  264|Drosophila melanogaster IP10371p pro...    29   6.2  
AE014297-1055|AAF54464.1|  264|Drosophila melanogaster CG9458-PA...    29   6.2  
AY089365-1|AAL90103.1|  508|Drosophila melanogaster AT18767p pro...    28   8.2  
AE014296-2428|AAF49706.1|  508|Drosophila melanogaster CG17173-P...    28   8.2  

>BT023378-1|AAY55794.1|  264|Drosophila melanogaster IP10371p
           protein.
          Length = 264

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
 Frame = -2

Query: 242 YNFEYIKNVPHPKLRLKSFS-LLLY------IM*ELN*FFFLLSKYKRYI-FLFAFYRSY 87
           YNF+ IKN+P P    K++   L Y      ++  L   FF+L K  R I FL  F+  Y
Sbjct: 87  YNFKCIKNLP-PDHEYKTWERWLTYSYFFNKLLDLLETVFFVLRKKDRQISFLHVFHHMY 145

Query: 86  KVRFQ*LILY 57
            + F  + LY
Sbjct: 146 MLYFSFMYLY 155


>AE014297-1055|AAF54464.1|  264|Drosophila melanogaster CG9458-PA
           protein.
          Length = 264

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
 Frame = -2

Query: 242 YNFEYIKNVPHPKLRLKSFS-LLLY------IM*ELN*FFFLLSKYKRYI-FLFAFYRSY 87
           YNF+ IKN+P P    K++   L Y      ++  L   FF+L K  R I FL  F+  Y
Sbjct: 87  YNFKCIKNLP-PDHEYKTWERWLTYSYFFNKLLDLLETVFFVLRKKDRQISFLHVFHHMY 145

Query: 86  KVRFQ*LILY 57
            + F  + LY
Sbjct: 146 MLYFSFMYLY 155


>AY089365-1|AAL90103.1|  508|Drosophila melanogaster AT18767p
           protein.
          Length = 508

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +1

Query: 193 LSRSFGCGTFFMYSKLYYNSFPMGHCLSCFKSQANAEIRSITGPHAKND 339
           L R+    +F  Y KL+YN  P+   L  F +  +    S++ P  + D
Sbjct: 255 LFRTSVLSSFVAYLKLFYNDQPIDWLLQSFVTLQSCRWDSVSDPECQRD 303


>AE014296-2428|AAF49706.1|  508|Drosophila melanogaster CG17173-PA
           protein.
          Length = 508

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +1

Query: 193 LSRSFGCGTFFMYSKLYYNSFPMGHCLSCFKSQANAEIRSITGPHAKND 339
           L R+    +F  Y KL+YN  P+   L  F +  +    S++ P  + D
Sbjct: 255 LFRTSVLSSFVAYLKLFYNDQPIDWLLQSFVTLQSCRWDSVSDPECQRD 303


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,952,488
Number of Sequences: 53049
Number of extensions: 423365
Number of successful extensions: 820
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 820
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2379510885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)