Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1586X
         (445 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    23   1.7  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   5.2  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   5.2  
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    21   6.9  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    20   9.2  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    20   9.2  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    20   9.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    20   9.2  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            20   9.2  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    20   9.2  

>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -1

Query: 286 IGDSSEPGQDPRGSPLTRWLPTTAG 212
           +  +S P   P G  L +WLP   G
Sbjct: 196 VSPASLPSISPSGGFLPKWLPPLQG 220


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -2

Query: 84  RLNLIKCFSSSARTLRTA*YTFSRR 10
           RL  I+CF   A TL    +TF  R
Sbjct: 89  RLIFIECFVMMALTLIVTLFTFLAR 113


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -2

Query: 84  RLNLIKCFSSSARTLRTA*YTFSRR 10
           RL  I+CF   A TL    +TF  R
Sbjct: 89  RLIFIECFVMMALTLIVTLFTFLAR 113


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 337 DYMVIGIQNGYPYVVMDIGDSSEPGQD 257
           D  ++ I NG   VV   GD+   G+D
Sbjct: 33  DVSILTIDNGVFEVVATSGDTHLGGED 59


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -2

Query: 183 QNPGIN*SPRSLALKSTGSMAVDMP 109
           QNPG+N +P     +   ++ +D P
Sbjct: 192 QNPGLNLNPPVTQTQLPLNLGLDFP 216


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 102 AIVAYPRPSNLYS*GPDCEEIN 167
           A+    RP +LY   P C ++N
Sbjct: 349 AVCVNERPWSLYCGEPPCGQLN 370


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -3

Query: 119 WICHDGWPRL 90
           W C  G+PRL
Sbjct: 174 WQCQGGYPRL 183


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 289 DIGDSSEPGQDPRGSP 242
           D+ + S+PG  P G P
Sbjct: 222 DVVNLSKPGTPPSGEP 237


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 267 GSELSPMSITTYGYPF*MP 323
           G+ +SP +    GYP  +P
Sbjct: 84  GASISPQNTPPAGYPMDVP 102


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 267 GSELSPMSITTYGYPF*MP 323
           G+ +SP +    GYP  +P
Sbjct: 84  GASISPQNTPPAGYPMDVP 102


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,029
Number of Sequences: 336
Number of extensions: 2725
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9985735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)