Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1586X
(445 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X58531-1|CAA41418.1| 2628|Homo sapiens laminin A chain protein. 37 0.036
Z99289-2|CAI42325.1| 1823|Homo sapiens laminin, alpha 4 protein. 33 0.34
X91171-1|CAA62596.1| 1816|Homo sapiens laminin alpha 4 protein. 33 0.34
X76939-1|CAA54258.1| 1581|Homo sapiens laminin A3 protein. 33 0.34
S78569-1|AAB34635.1| 1816|Homo sapiens laminin alpha 4 chain pro... 33 0.34
BC066552-1|AAH66552.1| 1816|Homo sapiens LAMA4 protein protein. 33 0.34
BC062318-1|AAH62318.1| 559|Homo sapiens LAMA1 protein protein. 33 0.34
BC039051-1|AAH39051.1| 747|Homo sapiens LAMA1 protein protein. 33 0.34
AL590106-3|CAI12950.1| 1823|Homo sapiens laminin, alpha 4 protein. 33 0.34
AB210027-1|BAE06109.1| 1852|Homo sapiens LAMA4 variant protein p... 33 0.34
Y13667-1|CAA74018.1| 667|Homo sapiens putative transcription fa... 32 1.0
BC053626-1|AAH53626.1| 667|Homo sapiens midline 1 (Opitz/BBB sy... 32 1.0
AF269101-1|AAG33130.1| 667|Homo sapiens midline 1 protein. 32 1.0
AF230976-1|AAG50191.1| 667|Homo sapiens tripartite motif protei... 32 1.0
AF041210-1|AAC33002.1| 630|Homo sapiens midline 1 fetal kidney ... 32 1.0
AF041209-1|AAC33001.1| 667|Homo sapiens midline 1 fetal kidney ... 32 1.0
AF041208-1|AAC33000.1| 667|Homo sapiens midline 1 fetal kidney ... 32 1.0
AF035360-1|AAB99951.1| 667|Homo sapiens ring finger protein pro... 32 1.0
BT007132-1|AAP35796.1| 210|Homo sapiens neighbor of COX4 protein. 31 2.4
BC146674-1|AAI46675.1| 788|Homo sapiens Unknown (protein for MG... 31 2.4
BC020250-1|AAH20250.1| 210|Homo sapiens COX4 neighbor protein. 31 2.4
BC007445-1|AAH07445.1| 210|Homo sapiens COX4 neighbor protein. 31 2.4
BC005886-1|AAH05886.1| 210|Homo sapiens COX4 neighbor protein. 31 2.4
BC001472-1|AAH01472.1| 210|Homo sapiens COX4 neighbor protein. 31 2.4
AF230977-1|AAG50192.1| 552|Homo sapiens tripartite motif protei... 31 2.4
AF005888-1|AAB94489.1| 210|Homo sapiens COX4AL protein. 31 2.4
AY210418-1|AAO34701.1| 3487|Homo sapiens CUB and sushi multiple ... 30 3.1
AB212622-1|BAD97692.1| 3631|Homo sapiens CSMD2 protein protein. 30 3.1
AB037158-1|BAA96867.1| 190|Homo sapiens DSCR6a protein. 30 4.1
X99135-1|CAA67576.1| 436|Homo sapiens collagen (VI) alpha-1 cha... 29 7.2
X15880-1|CAA33889.1| 436|Homo sapiens alpha-1 collagen VI (AA 5... 29 7.2
BC052575-1|AAH52575.1| 1028|Homo sapiens collagen, type VI, alph... 29 7.2
BC005159-1|AAH05159.2| 445|Homo sapiens COL6A1 protein protein. 29 7.2
AL355178-2|CAI23435.1| 426|Homo sapiens CUB and Sushi multiple ... 29 7.2
AL355178-1|CAI23434.1| 1167|Homo sapiens CUB and Sushi multiple ... 29 7.2
AL161643-1|CAI23498.1| 1167|Homo sapiens CUB and Sushi multiple ... 29 7.2
AK127722-1|BAC87101.1| 1167|Homo sapiens protein ( Homo sapiens ... 29 7.2
AF417489-1|AAN32667.1| 1445|Homo sapiens tensin 3 protein. 29 7.2
AF378756-1|AAL11993.1| 1205|Homo sapiens tumor endothelial marke... 29 7.2
AC073341-1|AAQ96841.1| 1205|Homo sapiens unknown protein. 29 7.2
AB208995-1|BAD92232.1| 1271|Homo sapiens Tensin 3 variant protein. 29 7.2
AY024361-1|AAK00583.1| 4911|Homo sapiens MLL3 protein. 29 9.6
AL833924-1|CAD38780.1| 1033|Homo sapiens hypothetical protein pr... 29 9.6
AF264750-1|AAF74766.2| 4025|Homo sapiens ALR-like protein protein. 29 9.6
AC006017-3|AAD45822.1| 1813|Homo sapiens WUGSC:H_DJ0981O07.3 pro... 29 9.6
>X58531-1|CAA41418.1| 2628|Homo sapiens laminin A chain protein.
Length = 2628
Score = 36.7 bits (81), Expect = 0.036
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = -1
Query: 160 SSQSGPQEYRFDGRGYATMAGRGYLTPQSNQVLLFFRTYAPNGLIYLL 17
SSQ+ + FDG GY+ + L Q+++ F T++PNGL+ L
Sbjct: 2300 SSQNEDPSFHFDGSGYSVVEKS--LPATVTQIIMLFNTFSPNGLLLYL 2345
>Z99289-2|CAI42325.1| 1823|Homo sapiens laminin, alpha 4 protein.
Length = 1823
Score = 33.5 bits (73), Expect = 0.34
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -1
Query: 175 RDKLISSQSGPQEYRFDGRGYATMAG--RGYLTPQSNQVLLFFRTYAPNGLIYLL 17
RDKL +QS Y FDG GYA + R Q + + RT A NGLI L+
Sbjct: 1037 RDKLAFTQSRAASYFFDGSGYAVVRDITRRGKFGQVTRFDIEVRTPADNGLILLM 1091
>X91171-1|CAA62596.1| 1816|Homo sapiens laminin alpha 4 protein.
Length = 1816
Score = 33.5 bits (73), Expect = 0.34
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -1
Query: 175 RDKLISSQSGPQEYRFDGRGYATMAG--RGYLTPQSNQVLLFFRTYAPNGLIYLL 17
RDKL +QS Y FDG GYA + R Q + + RT A NGLI L+
Sbjct: 1030 RDKLAFTQSRAASYFFDGSGYAVVRDITRRGKFGQVTRFDIEVRTPADNGLILLM 1084
>X76939-1|CAA54258.1| 1581|Homo sapiens laminin A3 protein.
Length = 1581
Score = 33.5 bits (73), Expect = 0.34
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -1
Query: 175 RDKLISSQSGPQEYRFDGRGYATMAG--RGYLTPQSNQVLLFFRTYAPNGLIYLL 17
RDKL +QS Y FDG GYA + R Q + + RT A NGLI L+
Sbjct: 795 RDKLAFTQSRAASYFFDGSGYAVVRDITRRGKFGQVTRFDIEVRTPADNGLILLM 849
>S78569-1|AAB34635.1| 1816|Homo sapiens laminin alpha 4 chain protein.
Length = 1816
Score = 33.5 bits (73), Expect = 0.34
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -1
Query: 175 RDKLISSQSGPQEYRFDGRGYATMAG--RGYLTPQSNQVLLFFRTYAPNGLIYLL 17
RDKL +QS Y FDG GYA + R Q + + RT A NGLI L+
Sbjct: 1030 RDKLAFTQSRAASYFFDGSGYAVVRDIPRRGKFGQVTRFDIEVRTPADNGLILLM 1084
>BC066552-1|AAH66552.1| 1816|Homo sapiens LAMA4 protein protein.
Length = 1816
Score = 33.5 bits (73), Expect = 0.34
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -1
Query: 175 RDKLISSQSGPQEYRFDGRGYATMAG--RGYLTPQSNQVLLFFRTYAPNGLIYLL 17
RDKL +QS Y FDG GYA + R Q + + RT A NGLI L+
Sbjct: 1030 RDKLAFTQSRAASYFFDGSGYAVVRDITRRGKFGQVTRFDIEVRTPADNGLILLM 1084
>BC062318-1|AAH62318.1| 559|Homo sapiens LAMA1 protein protein.
Length = 559
Score = 33.5 bits (73), Expect = 0.34
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 130 FDGRGYATMAGRGYLTPQSNQVLLFFRTYAPNGLI 26
FDG GYA + GY + L FRT + NG++
Sbjct: 379 FDGSGYAALVKEGYKVQSDVNITLEFRTSSQNGVL 413
>BC039051-1|AAH39051.1| 747|Homo sapiens LAMA1 protein protein.
Length = 747
Score = 33.5 bits (73), Expect = 0.34
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 130 FDGRGYATMAGRGYLTPQSNQVLLFFRTYAPNGLI 26
FDG GYA + GY + L FRT + NG++
Sbjct: 567 FDGSGYAALVKEGYKVQSDVNITLEFRTSSQNGVL 601
>AL590106-3|CAI12950.1| 1823|Homo sapiens laminin, alpha 4 protein.
Length = 1823
Score = 33.5 bits (73), Expect = 0.34
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -1
Query: 175 RDKLISSQSGPQEYRFDGRGYATMAG--RGYLTPQSNQVLLFFRTYAPNGLIYLL 17
RDKL +QS Y FDG GYA + R Q + + RT A NGLI L+
Sbjct: 1037 RDKLAFTQSRAASYFFDGSGYAVVRDITRRGKFGQVTRFDIEVRTPADNGLILLM 1091
>AB210027-1|BAE06109.1| 1852|Homo sapiens LAMA4 variant protein
protein.
Length = 1852
Score = 33.5 bits (73), Expect = 0.34
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -1
Query: 175 RDKLISSQSGPQEYRFDGRGYATMAG--RGYLTPQSNQVLLFFRTYAPNGLIYLL 17
RDKL +QS Y FDG GYA + R Q + + RT A NGLI L+
Sbjct: 1066 RDKLAFTQSRAASYFFDGSGYAVVRDITRRGKFGQVTRFDIEVRTPADNGLILLM 1120
>Y13667-1|CAA74018.1| 667|Homo sapiens putative transcription
factor XPRF protein.
Length = 667
Score = 31.9 bits (69), Expect = 1.0
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 9/113 (7%)
Frame = -1
Query: 334 YMVIGIQNGYPYVVM-----DIGD-SSEPGQDPRGSPLTRWLPTTAGTKSSLT-GNSTEP 176
Y V G+Q+G Y+ M G SSEPG+ S + P +A K ++ N T
Sbjct: 448 YTVHGLQSGTKYIFMVKAINQAGSRSSEPGKLKTNSQPFKLDPKSAHRKLKVSHDNLTVE 507
Query: 175 RDKLISSQSGPQEYRFDGRGYATMAGRGYLTPQSN--QVLLFFRTYAPNGLIY 23
RD+ S +S E RF +G +AG ++ + +V++ T+ GL Y
Sbjct: 508 RDESSSKKSHTPE-RFTSQGSYGVAGNVFIDSGRHYWEVVISGSTWYAIGLAY 559
>BC053626-1|AAH53626.1| 667|Homo sapiens midline 1 (Opitz/BBB
syndrome) protein.
Length = 667
Score = 31.9 bits (69), Expect = 1.0
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 9/113 (7%)
Frame = -1
Query: 334 YMVIGIQNGYPYVVM-----DIGD-SSEPGQDPRGSPLTRWLPTTAGTKSSLT-GNSTEP 176
Y V G+Q+G Y+ M G SSEPG+ S + P +A K ++ N T
Sbjct: 448 YTVHGLQSGTKYIFMVKAINQAGSRSSEPGKLKTNSQPFKLDPKSAHRKLKVSHDNLTVE 507
Query: 175 RDKLISSQSGPQEYRFDGRGYATMAGRGYLTPQSN--QVLLFFRTYAPNGLIY 23
RD+ S +S E RF +G +AG ++ + +V++ T+ GL Y
Sbjct: 508 RDESSSKKSHTPE-RFTSQGSYGVAGNVFIDSGRHYWEVVISGSTWYAIGLAY 559
>AF269101-1|AAG33130.1| 667|Homo sapiens midline 1 protein.
Length = 667
Score = 31.9 bits (69), Expect = 1.0
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 9/113 (7%)
Frame = -1
Query: 334 YMVIGIQNGYPYVVM-----DIGD-SSEPGQDPRGSPLTRWLPTTAGTKSSLT-GNSTEP 176
Y V G+Q+G Y+ M G SSEPG+ S + P +A K ++ N T
Sbjct: 448 YTVHGLQSGTKYIFMVKAINQAGSRSSEPGKLKTNSQPFKLDPKSAHRKLKVSHDNLTVE 507
Query: 175 RDKLISSQSGPQEYRFDGRGYATMAGRGYLTPQSN--QVLLFFRTYAPNGLIY 23
RD+ S +S E RF +G +AG ++ + +V++ T+ GL Y
Sbjct: 508 RDESSSKKSHTPE-RFTSQGSYGVAGNVFIDSGRHYWEVVISGSTWYAIGLAY 559
>AF230976-1|AAG50191.1| 667|Homo sapiens tripartite motif protein
TRIM18 alpha protein.
Length = 667
Score = 31.9 bits (69), Expect = 1.0
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 9/113 (7%)
Frame = -1
Query: 334 YMVIGIQNGYPYVVM-----DIGD-SSEPGQDPRGSPLTRWLPTTAGTKSSLT-GNSTEP 176
Y V G+Q+G Y+ M G SSEPG+ S + P +A K ++ N T
Sbjct: 448 YTVHGLQSGTKYIFMVKAINQAGSRSSEPGKLKTNSQPFKLDPKSAHRKLKVSHDNLTVE 507
Query: 175 RDKLISSQSGPQEYRFDGRGYATMAGRGYLTPQSN--QVLLFFRTYAPNGLIY 23
RD+ S +S E RF +G +AG ++ + +V++ T+ GL Y
Sbjct: 508 RDESSSKKSHTPE-RFTSQGSYGVAGNVFIDSGRHYWEVVISGSTWYAIGLAY 559
>AF041210-1|AAC33002.1| 630|Homo sapiens midline 1 fetal kidney
isoform 3 protein.
Length = 630
Score = 31.9 bits (69), Expect = 1.0
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 9/113 (7%)
Frame = -1
Query: 334 YMVIGIQNGYPYVVM-----DIGD-SSEPGQDPRGSPLTRWLPTTAGTKSSLT-GNSTEP 176
Y V G+Q+G Y+ M G SSEPG+ S + P +A K ++ N T
Sbjct: 411 YTVHGLQSGTKYIFMVKAINQAGSRSSEPGKLKTNSQPFKLDPKSAHRKLKVSHDNLTVE 470
Query: 175 RDKLISSQSGPQEYRFDGRGYATMAGRGYLTPQSN--QVLLFFRTYAPNGLIY 23
RD+ S +S E RF +G +AG ++ + +V++ T+ GL Y
Sbjct: 471 RDESSSKKSHTPE-RFTSQGSYGVAGNVFIDSGRHYWEVVISGSTWYAIGLAY 522
>AF041209-1|AAC33001.1| 667|Homo sapiens midline 1 fetal kidney
isoform 2 protein.
Length = 667
Score = 31.9 bits (69), Expect = 1.0
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 9/113 (7%)
Frame = -1
Query: 334 YMVIGIQNGYPYVVM-----DIGD-SSEPGQDPRGSPLTRWLPTTAGTKSSLT-GNSTEP 176
Y V G+Q+G Y+ M G SSEPG+ S + P +A K ++ N T
Sbjct: 448 YTVHGLQSGTKYIFMVKAINQAGSRSSEPGKLKTNSQPFKLDPKSAHRKLKVSHDNLTVE 507
Query: 175 RDKLISSQSGPQEYRFDGRGYATMAGRGYLTPQSN--QVLLFFRTYAPNGLIY 23
RD+ S +S E RF +G +AG ++ + +V++ T+ GL Y
Sbjct: 508 RDESSSKKSHTPE-RFTSQGSYGVAGNVFIDSGRHYWEVVISGSTWYAIGLAY 559
>AF041208-1|AAC33000.1| 667|Homo sapiens midline 1 fetal kidney
isoform 1 protein.
Length = 667
Score = 31.9 bits (69), Expect = 1.0
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 9/113 (7%)
Frame = -1
Query: 334 YMVIGIQNGYPYVVM-----DIGD-SSEPGQDPRGSPLTRWLPTTAGTKSSLT-GNSTEP 176
Y V G+Q+G Y+ M G SSEPG+ S + P +A K ++ N T
Sbjct: 448 YTVHGLQSGTKYIFMVKAINQAGSRSSEPGKLKTNSQPFKLDPKSAHRKLKVSHDNLTVE 507
Query: 175 RDKLISSQSGPQEYRFDGRGYATMAGRGYLTPQSN--QVLLFFRTYAPNGLIY 23
RD+ S +S E RF +G +AG ++ + +V++ T+ GL Y
Sbjct: 508 RDESSSKKSHTPE-RFTSQGSYGVAGNVFIDSGRHYWEVVISGSTWYAIGLAY 559
>AF035360-1|AAB99951.1| 667|Homo sapiens ring finger protein
protein.
Length = 667
Score = 31.9 bits (69), Expect = 1.0
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 9/113 (7%)
Frame = -1
Query: 334 YMVIGIQNGYPYVVM-----DIGD-SSEPGQDPRGSPLTRWLPTTAGTKSSLT-GNSTEP 176
Y V G+Q+G Y+ M G SSEPG+ S + P +A K ++ N T
Sbjct: 448 YTVHGLQSGTKYIFMVKAINQAGSRSSEPGKLKTNSQPFKLDPKSAHRKLKVSHDNLTVE 507
Query: 175 RDKLISSQSGPQEYRFDGRGYATMAGRGYLTPQSN--QVLLFFRTYAPNGLIY 23
RD+ S +S E RF +G +AG ++ + +V++ T+ GL Y
Sbjct: 508 RDESSSKKSHTPE-RFTSQGSYGVAGNVFIDSGRHYWEVVISGSTWYAIGLAY 559
>BT007132-1|AAP35796.1| 210|Homo sapiens neighbor of COX4 protein.
Length = 210
Score = 30.7 bits (66), Expect = 2.4
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -3
Query: 335 LHGDRHSERIPVCSDGHRGQLRTWPGSARVSIDKMVADNRWYQVIVD 195
+H H E C D H WP + R+S + D+R Y+ +VD
Sbjct: 141 IHVYEHHENRWRCRDPHHDYCEDWPEAQRISAS--LLDSRSYETLVD 185
>BC146674-1|AAI46675.1| 788|Homo sapiens Unknown (protein for
MGC:164982) protein.
Length = 788
Score = 30.7 bits (66), Expect = 2.4
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -1
Query: 229 LPTTAGTKSSLTGNSTEPRDKLISSQSGPQEYRFDGRGYATMAGRGYL 86
L + GT+ S+ G P+ ++ + S FDGR + GR YL
Sbjct: 730 LNSIQGTEGSIEGFLEAPKMEMSQAPSSVMSLHFDGRAQDSRTGRDYL 777
>BC020250-1|AAH20250.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 30.7 bits (66), Expect = 2.4
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -3
Query: 335 LHGDRHSERIPVCSDGHRGQLRTWPGSARVSIDKMVADNRWYQVIVD 195
+H H E C D H WP + R+S + D+R Y+ +VD
Sbjct: 141 IHVYEHHENRWRCRDPHHDYCEDWPEAQRISAS--LLDSRSYETLVD 185
>BC007445-1|AAH07445.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 30.7 bits (66), Expect = 2.4
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -3
Query: 335 LHGDRHSERIPVCSDGHRGQLRTWPGSARVSIDKMVADNRWYQVIVD 195
+H H E C D H WP + R+S + D+R Y+ +VD
Sbjct: 141 IHVYEHHENRWRCRDPHHDYCEDWPEAQRISAS--LLDSRSYETLVD 185
>BC005886-1|AAH05886.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 30.7 bits (66), Expect = 2.4
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -3
Query: 335 LHGDRHSERIPVCSDGHRGQLRTWPGSARVSIDKMVADNRWYQVIVD 195
+H H E C D H WP + R+S + D+R Y+ +VD
Sbjct: 141 IHVYEHHENRWRCRDPHHDYCEDWPEAQRISAS--LLDSRSYETLVD 185
>BC001472-1|AAH01472.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 30.7 bits (66), Expect = 2.4
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -3
Query: 335 LHGDRHSERIPVCSDGHRGQLRTWPGSARVSIDKMVADNRWYQVIVD 195
+H H E C D H WP + R+S + D+R Y+ +VD
Sbjct: 141 IHVYEHHENRWRCRDPHHDYCEDWPEAQRISAS--LLDSRSYETLVD 185
>AF230977-1|AAG50192.1| 552|Homo sapiens tripartite motif protein
TRIM18 beta protein.
Length = 552
Score = 30.7 bits (66), Expect = 2.4
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Frame = -1
Query: 334 YMVIGIQNGYPYVVM-----DIGD-SSEPGQDPRGSPLTRWLPTTAGTKSSLT-GNSTEP 176
Y V G+Q+G Y+ M G SSEPG+ S + P +A K ++ N T
Sbjct: 448 YTVHGLQSGTKYIFMVKAINQAGSRSSEPGKLKTNSQPFKLDPKSAHRKLKVSHDNLTVE 507
Query: 175 RDKLISSQSGPQEYRFDGRGYATMAGRGYL 86
RD+ S +S E RF +G +AG ++
Sbjct: 508 RDESSSKKSHTPE-RFTSQGSYGVAGNVFI 536
>AF005888-1|AAB94489.1| 210|Homo sapiens COX4AL protein.
Length = 210
Score = 30.7 bits (66), Expect = 2.4
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -3
Query: 335 LHGDRHSERIPVCSDGHRGQLRTWPGSARVSIDKMVADNRWYQVIVD 195
+H H E C D H WP + R+S + D+R Y+ +VD
Sbjct: 141 IHVYEHHENRWRCRDPHHDYCEDWPEAQRISAS--LLDSRSYETLVD 185
>AY210418-1|AAO34701.1| 3487|Homo sapiens CUB and sushi multiple
domains 2 protein.
Length = 3487
Score = 30.3 bits (65), Expect = 3.1
Identities = 21/76 (27%), Positives = 33/76 (43%)
Frame = -1
Query: 229 LPTTAGTKSSLTGNSTEPRDKLISSQSGPQEYRFDGRGYATMAGRGYLTPQSNQVLLFFR 50
+P G + +L+ TEP I+ GPQ+ + + + SNQVLL F
Sbjct: 2214 VPIGHGVRLNLSLLQTEPSGDFITIWDGPQQTAPRLGVFTRSMAKKTVQSSSNQVLLKFH 2273
Query: 49 TYAPNGLIYLLKASVF 2
A G I+ + S +
Sbjct: 2274 RDAATGGIFAIAFSAY 2289
>AB212622-1|BAD97692.1| 3631|Homo sapiens CSMD2 protein protein.
Length = 3631
Score = 30.3 bits (65), Expect = 3.1
Identities = 21/76 (27%), Positives = 33/76 (43%)
Frame = -1
Query: 229 LPTTAGTKSSLTGNSTEPRDKLISSQSGPQEYRFDGRGYATMAGRGYLTPQSNQVLLFFR 50
+P G + +L+ TEP I+ GPQ+ + + + SNQVLL F
Sbjct: 2212 VPIGHGVRLNLSLLQTEPSGDFITIWDGPQQTAPRLGVFTRSMAKKTVQSSSNQVLLKFH 2271
Query: 49 TYAPNGLIYLLKASVF 2
A G I+ + S +
Sbjct: 2272 RDAATGGIFAIAFSAY 2287
>AB037158-1|BAA96867.1| 190|Homo sapiens DSCR6a protein.
Length = 190
Score = 29.9 bits (64), Expect = 4.1
Identities = 26/87 (29%), Positives = 35/87 (40%), Gaps = 6/87 (6%)
Frame = -1
Query: 283 GDSSEPGQDPRG----SPLTRWLPTTAGTKSSLTGNSTEPR-DKLISSQSGPQEYRFDGR 119
GD+ PRG +P W+ T + + TG EPR D+ G ++ R
Sbjct: 21 GDAPWRPPPPRGPESPAPWRPWIQTPGDAELTRTGRPLEPRADQHTFGSKGAFGFQHPVR 80
Query: 118 GYATMAGR-GYLTPQSNQVLLFFRTYA 41
Y M+ R YL QVL F A
Sbjct: 81 VYLPMSKRQEYLRSSGEQVLASFPVQA 107
>X99135-1|CAA67576.1| 436|Homo sapiens collagen (VI) alpha-1 chain
protein.
Length = 436
Score = 29.1 bits (62), Expect = 7.2
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 355 CEILEIVLKCCECVTC 402
CEIL+I++K C C C
Sbjct: 2 CEILDIIMKMCSCCEC 17
>X15880-1|CAA33889.1| 436|Homo sapiens alpha-1 collagen VI (AA
574-1009) protein.
Length = 436
Score = 29.1 bits (62), Expect = 7.2
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 355 CEILEIVLKCCECVTC 402
CEIL+I++K C C C
Sbjct: 2 CEILDIIMKMCSCCEC 17
>BC052575-1|AAH52575.1| 1028|Homo sapiens collagen, type VI, alpha 1
protein.
Length = 1028
Score = 29.1 bits (62), Expect = 7.2
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 355 CEILEIVLKCCECVTC 402
CEIL+I++K C C C
Sbjct: 594 CEILDIIMKMCSCCEC 609
>BC005159-1|AAH05159.2| 445|Homo sapiens COL6A1 protein protein.
Length = 445
Score = 29.1 bits (62), Expect = 7.2
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 355 CEILEIVLKCCECVTC 402
CEIL+I++K C C C
Sbjct: 11 CEILDIIMKMCSCCEC 26
>AL355178-2|CAI23435.1| 426|Homo sapiens CUB and Sushi multiple
domains 2 protein.
Length = 426
Score = 29.1 bits (62), Expect = 7.2
Identities = 21/74 (28%), Positives = 32/74 (43%)
Frame = -1
Query: 229 LPTTAGTKSSLTGNSTEPRDKLISSQSGPQEYRFDGRGYATMAGRGYLTPQSNQVLLFFR 50
+P G + +L+ TEP I+ GPQ+ + + + SNQVLL F
Sbjct: 311 VPIGHGVRLNLSLLQTEPSGDFITIWDGPQQTAPRLGVFTRSMAKKTVQSSSNQVLLKFH 370
Query: 49 TYAPNGLIYLLKAS 8
A G I+ + S
Sbjct: 371 RDAATGGIFAIAFS 384
>AL355178-1|CAI23434.1| 1167|Homo sapiens CUB and Sushi multiple
domains 2 protein.
Length = 1167
Score = 29.1 bits (62), Expect = 7.2
Identities = 21/74 (28%), Positives = 32/74 (43%)
Frame = -1
Query: 229 LPTTAGTKSSLTGNSTEPRDKLISSQSGPQEYRFDGRGYATMAGRGYLTPQSNQVLLFFR 50
+P G + +L+ TEP I+ GPQ+ + + + SNQVLL F
Sbjct: 1085 VPIGHGVRLNLSLLQTEPSGDFITIWDGPQQTAPRLGVFTRSMAKKTVQSSSNQVLLKFH 1144
Query: 49 TYAPNGLIYLLKAS 8
A G I+ + S
Sbjct: 1145 RDAATGGIFAIAFS 1158
>AL161643-1|CAI23498.1| 1167|Homo sapiens CUB and Sushi multiple
domains 2 protein.
Length = 1167
Score = 29.1 bits (62), Expect = 7.2
Identities = 21/74 (28%), Positives = 32/74 (43%)
Frame = -1
Query: 229 LPTTAGTKSSLTGNSTEPRDKLISSQSGPQEYRFDGRGYATMAGRGYLTPQSNQVLLFFR 50
+P G + +L+ TEP I+ GPQ+ + + + SNQVLL F
Sbjct: 1085 VPIGHGVRLNLSLLQTEPSGDFITIWDGPQQTAPRLGVFTRSMAKKTVQSSSNQVLLKFH 1144
Query: 49 TYAPNGLIYLLKAS 8
A G I+ + S
Sbjct: 1145 RDAATGGIFAIAFS 1158
>AK127722-1|BAC87101.1| 1167|Homo sapiens protein ( Homo sapiens cDNA
FLJ45822 fis, clone NT2RP8001604, moderately similar to
Homo sapiens CUB and Sushi multiple domains 1 (CSMD1). ).
Length = 1167
Score = 29.1 bits (62), Expect = 7.2
Identities = 21/74 (28%), Positives = 32/74 (43%)
Frame = -1
Query: 229 LPTTAGTKSSLTGNSTEPRDKLISSQSGPQEYRFDGRGYATMAGRGYLTPQSNQVLLFFR 50
+P G + +L+ TEP I+ GPQ+ + + + SNQVLL F
Sbjct: 1085 VPIGHGVRLNLSLLQTEPSGDFITIWDGPQQTAPRLGVFTRSMAKKTVQSSSNQVLLKFH 1144
Query: 49 TYAPNGLIYLLKAS 8
A G I+ + S
Sbjct: 1145 RDAATGGIFAIAFS 1158
>AF417489-1|AAN32667.1| 1445|Homo sapiens tensin 3 protein.
Length = 1445
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 187 SYLSTMTWYQRLSATILSMETLADPGQVRSCPRCPSLHTG-IRSECRSP 330
S ST TW ++ + + A G+ R RCP+ + G ++++ R P
Sbjct: 582 SSYSTQTWVRQQQMVVAHQYSFAPDGEARLVSRCPADNPGLVQAQPRVP 630
>AF378756-1|AAL11993.1| 1205|Homo sapiens tumor endothelial marker 6
protein.
Length = 1205
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 187 SYLSTMTWYQRLSATILSMETLADPGQVRSCPRCPSLHTG-IRSECRSP 330
S ST TW ++ + + A G+ R RCP+ + G ++++ R P
Sbjct: 342 SSYSTQTWVRQQQMVVAHQYSFAPDGEARLVSRCPADNPGLVQAQPRVP 390
>AC073341-1|AAQ96841.1| 1205|Homo sapiens unknown protein.
Length = 1205
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 187 SYLSTMTWYQRLSATILSMETLADPGQVRSCPRCPSLHTG-IRSECRSP 330
S ST TW ++ + + A G+ R RCP+ + G ++++ R P
Sbjct: 342 SSYSTQTWVRQQQMVVAHQYSFAPDGEARLVSRCPADNPGLVQAQPRVP 390
>AB208995-1|BAD92232.1| 1271|Homo sapiens Tensin 3 variant protein.
Length = 1271
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 187 SYLSTMTWYQRLSATILSMETLADPGQVRSCPRCPSLHTG-IRSECRSP 330
S ST TW ++ + + A G+ R RCP+ + G ++++ R P
Sbjct: 692 SSYSTQTWVRQQQMVVAHQYSFAPDGEARLVSRCPADNPGLVQAQPRVP 740
>AY024361-1|AAK00583.1| 4911|Homo sapiens MLL3 protein.
Length = 4911
Score = 28.7 bits (61), Expect = 9.6
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = -1
Query: 328 VIGIQ-NGYPYVVMDIGDSSEPGQDPRGSPLTRWLPTTAGTKSSLTGN--STEPRDKLIS 158
V+G++ + YP D+ E +P SP+ LP+TAG S N TEP +
Sbjct: 4010 VVGVEVSRYP----DLSLVKEEPPEPVPSPIIPILPSTAGKSSESRRNDIKTEPGTLYFA 4065
Query: 157 SQSGP 143
S GP
Sbjct: 4066 SPFGP 4070
>AL833924-1|CAD38780.1| 1033|Homo sapiens hypothetical protein
protein.
Length = 1033
Score = 28.7 bits (61), Expect = 9.6
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = -1
Query: 328 VIGIQ-NGYPYVVMDIGDSSEPGQDPRGSPLTRWLPTTAGTKSSLTGN--STEPRDKLIS 158
V+G++ + YP D+ E +P SP+ LP+TAG S N TEP +
Sbjct: 132 VVGVEVSRYP----DLSLVKEEPPEPVPSPIIPILPSTAGKSSESRRNDIKTEPGTLYFA 187
Query: 157 SQSGP 143
S GP
Sbjct: 188 SPFGP 192
>AF264750-1|AAF74766.2| 4025|Homo sapiens ALR-like protein protein.
Length = 4025
Score = 28.7 bits (61), Expect = 9.6
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = -1
Query: 328 VIGIQ-NGYPYVVMDIGDSSEPGQDPRGSPLTRWLPTTAGTKSSLTGN--STEPRDKLIS 158
V+G++ + YP D+ E +P SP+ LP+TAG S N TEP +
Sbjct: 3128 VVGVEVSRYP----DLSLVKEEPPEPVPSPIIPILPSTAGKSSESRRNDIKTEPGTLYFA 3183
Query: 157 SQSGP 143
S GP
Sbjct: 3184 SPFGP 3188
>AC006017-3|AAD45822.1| 1813|Homo sapiens WUGSC:H_DJ0981O07.3 protein.
Length = 1813
Score = 28.7 bits (61), Expect = 9.6
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = -1
Query: 328 VIGIQ-NGYPYVVMDIGDSSEPGQDPRGSPLTRWLPTTAGTKSSLTGN--STEPRDKLIS 158
V+G++ + YP D+ E +P SP+ LP+TAG S N TEP +
Sbjct: 916 VVGVEVSRYP----DLSLVKEEPPEPVPSPIIPILPSTAGKSSESRRNDIKTEPGTLYFA 971
Query: 157 SQSGP 143
S GP
Sbjct: 972 SPFGP 976
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,787,536
Number of Sequences: 237096
Number of extensions: 1843724
Number of successful extensions: 4629
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 4302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4618
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3659526016
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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