Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1584
(821 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001541-1|AAN71296.1| 659|Drosophila melanogaster RE09914p pro... 32 0.82
AY113434-1|AAM29439.1| 659|Drosophila melanogaster RE25878p pro... 32 0.82
AF231704-1|AAF36978.1| 659|Drosophila melanogaster poly A polym... 32 0.82
AE013599-2939|ABI31107.1| 659|Drosophila melanogaster CG9854-PC... 32 0.82
AE013599-2938|AAM68424.1| 659|Drosophila melanogaster CG9854-PB... 32 0.82
AE013599-2937|AAF57528.2| 659|Drosophila melanogaster CG9854-PA... 32 0.82
AB018431-1|BAB03279.1| 659|Drosophila melanogaster poly A polym... 32 0.82
AB018430-1|BAB03278.1| 459|Drosophila melanogaster poly A polym... 32 0.82
AY089617-1|AAL90355.1| 958|Drosophila melanogaster RE32881p pro... 31 1.4
AE014298-1748|AAF48140.5| 1040|Drosophila melanogaster CG32656-P... 31 1.4
AY051710-1|AAK93134.1| 745|Drosophila melanogaster LD24835p pro... 30 4.4
AF221547-1|AAF34654.1| 742|Drosophila melanogaster RhoGTPase pr... 30 4.4
AF217287-1|AAF44065.1| 745|Drosophila melanogaster G protein Rh... 30 4.4
AE014296-3345|AAF51585.3| 745|Drosophila melanogaster CG5701-PA... 30 4.4
AE014298-1695|AAF48098.2| 1168|Drosophila melanogaster CG32662-P... 29 5.8
AY075455-1|AAL68268.1| 602|Drosophila melanogaster RE13191p pro... 29 7.7
AE014296-2910|AAF49342.2| 581|Drosophila melanogaster CG32176-P... 29 7.7
>BT001541-1|AAN71296.1| 659|Drosophila melanogaster RE09914p
protein.
Length = 659
Score = 32.3 bits (70), Expect = 0.82
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = +2
Query: 89 KNQSENVQNVENTPKSSDDQIKIQSNEGKTTSVSIKEDLFLGLELEKSSTDN 244
K QS N N +N + DD + Q N+ TS F+GLE E+S N
Sbjct: 433 KGQSAN--NSQNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFERSENLN 482
>AY113434-1|AAM29439.1| 659|Drosophila melanogaster RE25878p
protein.
Length = 659
Score = 32.3 bits (70), Expect = 0.82
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = +2
Query: 89 KNQSENVQNVENTPKSSDDQIKIQSNEGKTTSVSIKEDLFLGLELEKSSTDN 244
K QS N N +N + DD + Q N+ TS F+GLE E+S N
Sbjct: 433 KGQSAN--NSQNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFERSENLN 482
>AF231704-1|AAF36978.1| 659|Drosophila melanogaster poly A
polymerase protein.
Length = 659
Score = 32.3 bits (70), Expect = 0.82
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = +2
Query: 89 KNQSENVQNVENTPKSSDDQIKIQSNEGKTTSVSIKEDLFLGLELEKSSTDN 244
K QS N N +N + DD + Q N+ TS F+GLE E+S N
Sbjct: 433 KGQSAN--NSQNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFERSENLN 482
>AE013599-2939|ABI31107.1| 659|Drosophila melanogaster CG9854-PC,
isoform C protein.
Length = 659
Score = 32.3 bits (70), Expect = 0.82
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = +2
Query: 89 KNQSENVQNVENTPKSSDDQIKIQSNEGKTTSVSIKEDLFLGLELEKSSTDN 244
K QS N N +N + DD + Q N+ TS F+GLE E+S N
Sbjct: 433 KGQSAN--NSQNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFERSENLN 482
>AE013599-2938|AAM68424.1| 659|Drosophila melanogaster CG9854-PB,
isoform B protein.
Length = 659
Score = 32.3 bits (70), Expect = 0.82
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = +2
Query: 89 KNQSENVQNVENTPKSSDDQIKIQSNEGKTTSVSIKEDLFLGLELEKSSTDN 244
K QS N N +N + DD + Q N+ TS F+GLE E+S N
Sbjct: 433 KGQSAN--NSQNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFERSENLN 482
>AE013599-2937|AAF57528.2| 659|Drosophila melanogaster CG9854-PA,
isoform A protein.
Length = 659
Score = 32.3 bits (70), Expect = 0.82
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = +2
Query: 89 KNQSENVQNVENTPKSSDDQIKIQSNEGKTTSVSIKEDLFLGLELEKSSTDN 244
K QS N N +N + DD + Q N+ TS F+GLE E+S N
Sbjct: 433 KGQSAN--NSQNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFERSENLN 482
>AB018431-1|BAB03279.1| 659|Drosophila melanogaster poly A
polymerase protein.
Length = 659
Score = 32.3 bits (70), Expect = 0.82
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = +2
Query: 89 KNQSENVQNVENTPKSSDDQIKIQSNEGKTTSVSIKEDLFLGLELEKSSTDN 244
K QS N N +N + DD + Q N+ TS F+GLE E+S N
Sbjct: 433 KGQSAN--NSQNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFERSENLN 482
>AB018430-1|BAB03278.1| 459|Drosophila melanogaster poly A
polymerase protein.
Length = 459
Score = 32.3 bits (70), Expect = 0.82
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = +2
Query: 89 KNQSENVQNVENTPKSSDDQIKIQSNEGKTTSVSIKEDLFLGLELEKSSTDN 244
K QS N N +N + DD + Q N+ TS F+GLE E+S N
Sbjct: 233 KGQSAN--NSQNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFERSENLN 282
>AY089617-1|AAL90355.1| 958|Drosophila melanogaster RE32881p protein.
Length = 958
Score = 31.5 bits (68), Expect = 1.4
Identities = 26/92 (28%), Positives = 46/92 (50%)
Frame = +2
Query: 20 VEDISRVSPEKLIPSSPDRRSTVKNQSENVQNVENTPKSSDDQIKIQSNEGKTTSVSIKE 199
VE + V P +P+S + S + + + ++ PKS +DQ K Q + K +S ++
Sbjct: 779 VEQAAPVPPAN-VPASNENASVEDSNKASSEKSKDKPKSGEDQSKEQEQK-KPSSEEKEK 836
Query: 200 DLFLGLELEKSSTDNKKSEQNKY*KMKKNLTK 295
D EK+ D+K+ + N K KK+ +K
Sbjct: 837 D-----SKEKNDKDSKEKKDNDS-KDKKDKSK 862
>AE014298-1748|AAF48140.5| 1040|Drosophila melanogaster CG32656-PA
protein.
Length = 1040
Score = 31.5 bits (68), Expect = 1.4
Identities = 26/92 (28%), Positives = 46/92 (50%)
Frame = +2
Query: 20 VEDISRVSPEKLIPSSPDRRSTVKNQSENVQNVENTPKSSDDQIKIQSNEGKTTSVSIKE 199
VE + V P +P+S + S + + + ++ PKS +DQ K Q + K +S ++
Sbjct: 861 VEQAAPVPPAN-VPASNENASVEDSNKASSEKSKDKPKSGEDQSKEQEQK-KPSSEEKEK 918
Query: 200 DLFLGLELEKSSTDNKKSEQNKY*KMKKNLTK 295
D EK+ D+K+ + N K KK+ +K
Sbjct: 919 D-----SKEKNDKDSKEKKDNDS-KDKKDKSK 944
>AY051710-1|AAK93134.1| 745|Drosophila melanogaster LD24835p
protein.
Length = 745
Score = 29.9 bits (64), Expect = 4.4
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Frame = +1
Query: 469 ISDFCDETETLVRLSCRMR-----LKSRGSFQC----S*RKSMKLTKRL*HYVIQAIK 615
I+DF D+TE L+R R + LK R S+Q ++S L + L H V+Q+I+
Sbjct: 324 IADFNDDTEALIRYESRTQRMWEHLKRRSSYQALPLMESKRSNDLYRELHHPVLQSIR 381
>AF221547-1|AAF34654.1| 742|Drosophila melanogaster RhoGTPase
protein.
Length = 742
Score = 29.9 bits (64), Expect = 4.4
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Frame = +1
Query: 469 ISDFCDETETLVRLSCRMR-----LKSRGSFQC----S*RKSMKLTKRL*HYVIQAIK 615
I+DF D+TE L+R R + LK R S+Q ++S L + L H V+Q+I+
Sbjct: 324 IADFNDDTEALIRYESRTQRMWEHLKRRSSYQALPLMESKRSNDLYRELHHPVLQSIR 381
>AF217287-1|AAF44065.1| 745|Drosophila melanogaster G protein
RhoBTB protein.
Length = 745
Score = 29.9 bits (64), Expect = 4.4
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Frame = +1
Query: 469 ISDFCDETETLVRLSCRMR-----LKSRGSFQC----S*RKSMKLTKRL*HYVIQAIK 615
I+DF D+TE L+R R + LK R S+Q ++S L + L H V+Q+I+
Sbjct: 324 IADFNDDTEALIRYESRTQRMWEHLKRRSSYQALPLMESKRSNDLYRELHHPVLQSIR 381
>AE014296-3345|AAF51585.3| 745|Drosophila melanogaster CG5701-PA
protein.
Length = 745
Score = 29.9 bits (64), Expect = 4.4
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Frame = +1
Query: 469 ISDFCDETETLVRLSCRMR-----LKSRGSFQC----S*RKSMKLTKRL*HYVIQAIK 615
I+DF D+TE L+R R + LK R S+Q ++S L + L H V+Q+I+
Sbjct: 324 IADFNDDTEALIRYESRTQRMWEHLKRRSSYQALPLMESKRSNDLYRELHHPVLQSIR 381
>AE014298-1695|AAF48098.2| 1168|Drosophila melanogaster CG32662-PA
protein.
Length = 1168
Score = 29.5 bits (63), Expect = 5.8
Identities = 17/87 (19%), Positives = 37/87 (42%)
Frame = +2
Query: 23 EDISRVSPEKLIPSSPDRRSTVKNQSENVQNVENTPKSSDDQIKIQSNEGKTTSVSIKED 202
E I E+ + + + K + E ++ E K + + + + + K + KE+
Sbjct: 585 EKIKEKEKEEKLRKEREEKMREKEREEKIKEKERVEKIKEKEREEKLKKEKEEKLKEKEE 644
Query: 203 LFLGLELEKSSTDNKKSEQNKY*KMKK 283
L E E+ + K E+ + K+K+
Sbjct: 645 LLKKKEKEEKEREEKLKEKERQEKLKE 671
>AY075455-1|AAL68268.1| 602|Drosophila melanogaster RE13191p
protein.
Length = 602
Score = 29.1 bits (62), Expect = 7.7
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +2
Query: 23 EDISRVSPEKLIPSSPDRRSTVKNQSENVQNVENTPKSSDDQIKIQSNEGKTTSVSIK 196
+DI V EK+ D+RST K S ++ E+ +S Q S E + IK
Sbjct: 213 DDIDEVPVEKVQRKEKDKRSTKKTDSSKRKSQESARPTSPSQPDSSSKEQEAPRKRIK 270
>AE014296-2910|AAF49342.2| 581|Drosophila melanogaster CG32176-PA
protein.
Length = 581
Score = 29.1 bits (62), Expect = 7.7
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +2
Query: 23 EDISRVSPEKLIPSSPDRRSTVKNQSENVQNVENTPKSSDDQIKIQSNEGKTTSVSIK 196
+DI V EK+ D+RST K S ++ E+ +S Q S E + IK
Sbjct: 192 DDIDEVPVEKVQRKEKDKRSTKKTDSSKRKSQESARPTSPSQPDSSSKEQEAPRKRIK 249
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,440,930
Number of Sequences: 53049
Number of extensions: 487922
Number of successful extensions: 1511
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1510
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3880595628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -