Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1584
(821 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z72506-7|CAA96620.2| 293|Caenorhabditis elegans Hypothetical pr... 29 4.0
U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical pr... 29 4.0
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 29 4.0
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 5.3
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 5.3
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 7.0
AC090999-25|AAK26157.2| 921|Caenorhabditis elegans Hypothetical... 28 7.0
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 28 9.3
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 28 9.3
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 28 9.3
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 28 9.3
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 28 9.3
L17337-2|AAP68929.1| 202|Caenorhabditis elegans Hypothetical pr... 28 9.3
>Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical protein
C09G5.8 protein.
Length = 1531
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +2
Query: 5 NNDSFVEDISRVSPEKLIPSSPDRRSTVKNQSENVQNVENTPKSSDDQIKIQSNEGKTTS 184
++D +E +S VS ++ P+ + Q EN+ + E+TP+ SD +NE K ++
Sbjct: 1151 DDDDEIESVSAVSSQR----DPEPLEVPERQVENLPSPEDTPRPSDPLKPNGTNESKEST 1206
>Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical protein
C09G5.8 protein.
Length = 1531
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +2
Query: 5 NNDSFVEDISRVSPEKLIPSSPDRRSTVKNQSENVQNVENTPKSSDDQIKIQSNEGKTTS 184
++D +E +S VS ++ P+ + Q EN+ + E+TP+ SD +NE K ++
Sbjct: 1151 DDDDEIESVSAVSSQR----DPEPLEVPERQVENLPSPEDTPRPSDPLKPNGTNESKEST 1206
>Z72506-7|CAA96620.2| 293|Caenorhabditis elegans Hypothetical
protein F07A5.6 protein.
Length = 293
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +2
Query: 23 EDISRVSPEKLI--PSSPDRRSTVKNQSENVQNVENTPKSSDD 145
E+I R+SPE LI P P R S S +++ + T KSS D
Sbjct: 153 EEIRRISPEILIAPPPQPRRMSKFSVHSPSIEQI--TSKSSSD 193
>U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical
protein ZC449.5 protein.
Length = 493
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +2
Query: 65 SPDRRSTVKNQSENVQNVENTPKSSDDQIKIQSNE-GKTTSVSIKEDLFLGLELEKSSTD 241
S + +TVK+ + + PK++++ + +E KT S + E + T+
Sbjct: 85 SEEETTTVKSHKKKSTKTTDAPKTTEEPASTKKSEKKKTESKKAVKTTTTAAPAESAETE 144
Query: 242 NKKSEQNK 265
SE+NK
Sbjct: 145 TPSSEENK 152
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 29.1 bits (62), Expect = 4.0
Identities = 23/101 (22%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Frame = +2
Query: 8 NDSFVEDISRVSPEKLIPSSPDRRSTVKNQSEN-----VQNVENTPKSSDDQIKIQSNEG 172
+D+ ED+ ++ P ++ K +SE V+ VE++PK +D ++ +
Sbjct: 536 SDNEEEDVEESPKKRTSPRKSSKKRAAKEESEESSDNEVEEVEDSPKKNDKTLR--KSPR 593
Query: 173 KTTSVSIKEDLFLGLELEKSSTDNKKSEQNKY*KMKKNLTK 295
K + E+ F E E+ KK + KK+ K
Sbjct: 594 KPAAKVESEESFGNEEEEEVEESPKKKGKTPRKSSKKSAAK 634
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +2
Query: 167 EGKTTSVSIKEDLFLGLELEKSSTDNKKSEQNKY*KMKK 283
EGK T++ KE+ + EKS +D KKSE +K ++K+
Sbjct: 15466 EGKITTLKKKEETGKQ-KSEKSESDEKKSESDKVSELKQ 15503
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +2
Query: 167 EGKTTSVSIKEDLFLGLELEKSSTDNKKSEQNKY*KMKK 283
EGK T++ KE+ + EKS +D KKSE +K ++K+
Sbjct: 15466 EGKITTLKKKEETGKQ-KSEKSESDEKKSESDKVSELKQ 15503
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +2
Query: 14 SFVEDISRVSPEKLIPSSPDRRSTVKNQSENVQNV-ENTPKSSDDQIKIQSNEGKTTSVS 190
S + D+S VS L P S STV + +++ + E + K+S + Q++ T
Sbjct: 1368 STISDVSSVSTTSLAPLSSSLPSTVPSSTQSFSSTSEGSSKASSSPVPSQTSSTPTNPTG 1427
Query: 191 IKE 199
E
Sbjct: 1428 STE 1430
>AC090999-25|AAK26157.2| 921|Caenorhabditis elegans Hypothetical
protein Y82E9BR.18 protein.
Length = 921
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +2
Query: 119 ENTPKSSDDQIKIQSNEGKTTSVSIKEDLFLGLELEKSSTDNKKSEQNKY*KMK 280
+N K+S + K+ N KTT + ++E L L + T ++ + K KMK
Sbjct: 697 KNPVKNSQNAQKLPKNAEKTTQLYLEEKLKEQLGGPSAKTQKRRQRKEKLAKMK 750
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 119 ENTPKSSDDQIKIQSNEGKT 178
E TP SDD++K+ + +GKT
Sbjct: 2777 EGTPVESDDRMKLNNEDGKT 2796
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 119 ENTPKSSDDQIKIQSNEGKT 178
E TP SDD++K+ + +GKT
Sbjct: 3306 EGTPVESDDRMKLNNEDGKT 3325
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 119 ENTPKSSDDQIKIQSNEGKT 178
E TP SDD++K+ + +GKT
Sbjct: 2987 EGTPVESDDRMKLNNEDGKT 3006
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 119 ENTPKSSDDQIKIQSNEGKT 178
E TP SDD++K+ + +GKT
Sbjct: 2777 EGTPVESDDRMKLNNEDGKT 2796
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 119 ENTPKSSDDQIKIQSNEGKT 178
E TP SDD++K+ + +GKT
Sbjct: 3306 EGTPVESDDRMKLNNEDGKT 3325
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 119 ENTPKSSDDQIKIQSNEGKT 178
E TP SDD++K+ + +GKT
Sbjct: 2987 EGTPVESDDRMKLNNEDGKT 3006
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 119 ENTPKSSDDQIKIQSNEGKT 178
E TP SDD++K+ + +GKT
Sbjct: 2196 EGTPVESDDRMKLNNEDGKT 2215
>L17337-2|AAP68929.1| 202|Caenorhabditis elegans Hypothetical
protein ZK686.5 protein.
Length = 202
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +2
Query: 110 QNVENTPKSSDDQIKIQSNEGKTTSVSIKEDLFLGLELEKSS--TDNKKSEQNKY*KMKK 283
+NV+NT K + + +IK+ LF+ L + +++ DN+K ++ K MK+
Sbjct: 44 KNVDNTSTRKPYSYKDRKRKNTEEIRNIKKKLFMDLGIVRTNCGIDNEKQDREK--AMKR 101
Query: 284 NLTKMMI 304
+T+ ++
Sbjct: 102 KVTETIV 108
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,207,092
Number of Sequences: 27780
Number of extensions: 273155
Number of successful extensions: 987
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 987
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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