BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1584 (821 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical pr... 30 1.7 Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical pr... 30 1.7 Z72506-7|CAA96620.2| 293|Caenorhabditis elegans Hypothetical pr... 29 4.0 U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical pr... 29 4.0 AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 29 4.0 AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 5.3 AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 5.3 U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 7.0 AC090999-25|AAK26157.2| 921|Caenorhabditis elegans Hypothetical... 28 7.0 Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 28 9.3 Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 28 9.3 Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 28 9.3 Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 28 9.3 Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 28 9.3 Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 28 9.3 X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 28 9.3 L17337-2|AAP68929.1| 202|Caenorhabditis elegans Hypothetical pr... 28 9.3 >Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical protein C09G5.8 protein. Length = 1531 Score = 30.3 bits (65), Expect = 1.7 Identities = 17/60 (28%), Positives = 32/60 (53%) Frame = +2 Query: 5 NNDSFVEDISRVSPEKLIPSSPDRRSTVKNQSENVQNVENTPKSSDDQIKIQSNEGKTTS 184 ++D +E +S VS ++ P+ + Q EN+ + E+TP+ SD +NE K ++ Sbjct: 1151 DDDDEIESVSAVSSQR----DPEPLEVPERQVENLPSPEDTPRPSDPLKPNGTNESKEST 1206 >Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical protein C09G5.8 protein. Length = 1531 Score = 30.3 bits (65), Expect = 1.7 Identities = 17/60 (28%), Positives = 32/60 (53%) Frame = +2 Query: 5 NNDSFVEDISRVSPEKLIPSSPDRRSTVKNQSENVQNVENTPKSSDDQIKIQSNEGKTTS 184 ++D +E +S VS ++ P+ + Q EN+ + E+TP+ SD +NE K ++ Sbjct: 1151 DDDDEIESVSAVSSQR----DPEPLEVPERQVENLPSPEDTPRPSDPLKPNGTNESKEST 1206 >Z72506-7|CAA96620.2| 293|Caenorhabditis elegans Hypothetical protein F07A5.6 protein. Length = 293 Score = 29.1 bits (62), Expect = 4.0 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = +2 Query: 23 EDISRVSPEKLI--PSSPDRRSTVKNQSENVQNVENTPKSSDD 145 E+I R+SPE LI P P R S S +++ + T KSS D Sbjct: 153 EEIRRISPEILIAPPPQPRRMSKFSVHSPSIEQI--TSKSSSD 193 >U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical protein ZC449.5 protein. Length = 493 Score = 29.1 bits (62), Expect = 4.0 Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Frame = +2 Query: 65 SPDRRSTVKNQSENVQNVENTPKSSDDQIKIQSNE-GKTTSVSIKEDLFLGLELEKSSTD 241 S + +TVK+ + + PK++++ + +E KT S + E + T+ Sbjct: 85 SEEETTTVKSHKKKSTKTTDAPKTTEEPASTKKSEKKKTESKKAVKTTTTAAPAESAETE 144 Query: 242 NKKSEQNK 265 SE+NK Sbjct: 145 TPSSEENK 152 >AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical protein Y55B1BR.3 protein. Length = 679 Score = 29.1 bits (62), Expect = 4.0 Identities = 23/101 (22%), Positives = 43/101 (42%), Gaps = 5/101 (4%) Frame = +2 Query: 8 NDSFVEDISRVSPEKLIPSSPDRRSTVKNQSEN-----VQNVENTPKSSDDQIKIQSNEG 172 +D+ ED+ ++ P ++ K +SE V+ VE++PK +D ++ + Sbjct: 536 SDNEEEDVEESPKKRTSPRKSSKKRAAKEESEESSDNEVEEVEDSPKKNDKTLR--KSPR 593 Query: 173 KTTSVSIKEDLFLGLELEKSSTDNKKSEQNKY*KMKKNLTK 295 K + E+ F E E+ KK + KK+ K Sbjct: 594 KPAAKVESEESFGNEEEEEVEESPKKKGKTPRKSSKKSAAK 634 >AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein protein. Length = 18519 Score = 28.7 bits (61), Expect = 5.3 Identities = 16/39 (41%), Positives = 25/39 (64%) Frame = +2 Query: 167 EGKTTSVSIKEDLFLGLELEKSSTDNKKSEQNKY*KMKK 283 EGK T++ KE+ + EKS +D KKSE +K ++K+ Sbjct: 15466 EGKITTLKKKEETGKQ-KSEKSESDEKKSESDKVSELKQ 15503 >AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein protein. Length = 18534 Score = 28.7 bits (61), Expect = 5.3 Identities = 16/39 (41%), Positives = 25/39 (64%) Frame = +2 Query: 167 EGKTTSVSIKEDLFLGLELEKSSTDNKKSEQNKY*KMKK 283 EGK T++ KE+ + EKS +D KKSE +K ++K+ Sbjct: 15466 EGKITTLKKKEETGKQ-KSEKSESDEKKSESDKVSELKQ 15503 >U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein K06A9.1b protein. Length = 2232 Score = 28.3 bits (60), Expect = 7.0 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Frame = +2 Query: 14 SFVEDISRVSPEKLIPSSPDRRSTVKNQSENVQNV-ENTPKSSDDQIKIQSNEGKTTSVS 190 S + D+S VS L P S STV + +++ + E + K+S + Q++ T Sbjct: 1368 STISDVSSVSTTSLAPLSSSLPSTVPSSTQSFSSTSEGSSKASSSPVPSQTSSTPTNPTG 1427 Query: 191 IKE 199 E Sbjct: 1428 STE 1430 >AC090999-25|AAK26157.2| 921|Caenorhabditis elegans Hypothetical protein Y82E9BR.18 protein. Length = 921 Score = 28.3 bits (60), Expect = 7.0 Identities = 16/54 (29%), Positives = 27/54 (50%) Frame = +2 Query: 119 ENTPKSSDDQIKIQSNEGKTTSVSIKEDLFLGLELEKSSTDNKKSEQNKY*KMK 280 +N K+S + K+ N KTT + ++E L L + T ++ + K KMK Sbjct: 697 KNPVKNSQNAQKLPKNAEKTTQLYLEEKLKEQLGGPSAKTQKRRQRKEKLAKMK 750 >Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical protein ZK617.1c protein. Length = 6629 Score = 27.9 bits (59), Expect = 9.3 Identities = 10/20 (50%), Positives = 15/20 (75%) Frame = +2 Query: 119 ENTPKSSDDQIKIQSNEGKT 178 E TP SDD++K+ + +GKT Sbjct: 2777 EGTPVESDDRMKLNNEDGKT 2796 >Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical protein ZK617.1b protein. Length = 7158 Score = 27.9 bits (59), Expect = 9.3 Identities = 10/20 (50%), Positives = 15/20 (75%) Frame = +2 Query: 119 ENTPKSSDDQIKIQSNEGKT 178 E TP SDD++K+ + +GKT Sbjct: 3306 EGTPVESDDRMKLNNEDGKT 3325 >Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical protein ZK617.1a protein. Length = 6839 Score = 27.9 bits (59), Expect = 9.3 Identities = 10/20 (50%), Positives = 15/20 (75%) Frame = +2 Query: 119 ENTPKSSDDQIKIQSNEGKT 178 E TP SDD++K+ + +GKT Sbjct: 2987 EGTPVESDDRMKLNNEDGKT 3006 >Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein ZK617.1c protein. Length = 6629 Score = 27.9 bits (59), Expect = 9.3 Identities = 10/20 (50%), Positives = 15/20 (75%) Frame = +2 Query: 119 ENTPKSSDDQIKIQSNEGKT 178 E TP SDD++K+ + +GKT Sbjct: 2777 EGTPVESDDRMKLNNEDGKT 2796 >Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein ZK617.1b protein. Length = 7158 Score = 27.9 bits (59), Expect = 9.3 Identities = 10/20 (50%), Positives = 15/20 (75%) Frame = +2 Query: 119 ENTPKSSDDQIKIQSNEGKT 178 E TP SDD++K+ + +GKT Sbjct: 3306 EGTPVESDDRMKLNNEDGKT 3325 >Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein ZK617.1a protein. Length = 6839 Score = 27.9 bits (59), Expect = 9.3 Identities = 10/20 (50%), Positives = 15/20 (75%) Frame = +2 Query: 119 ENTPKSSDDQIKIQSNEGKT 178 E TP SDD++K+ + +GKT Sbjct: 2987 EGTPVESDDRMKLNNEDGKT 3006 >X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. Length = 6048 Score = 27.9 bits (59), Expect = 9.3 Identities = 10/20 (50%), Positives = 15/20 (75%) Frame = +2 Query: 119 ENTPKSSDDQIKIQSNEGKT 178 E TP SDD++K+ + +GKT Sbjct: 2196 EGTPVESDDRMKLNNEDGKT 2215 >L17337-2|AAP68929.1| 202|Caenorhabditis elegans Hypothetical protein ZK686.5 protein. Length = 202 Score = 27.9 bits (59), Expect = 9.3 Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%) Frame = +2 Query: 110 QNVENTPKSSDDQIKIQSNEGKTTSVSIKEDLFLGLELEKSS--TDNKKSEQNKY*KMKK 283 +NV+NT K + + +IK+ LF+ L + +++ DN+K ++ K MK+ Sbjct: 44 KNVDNTSTRKPYSYKDRKRKNTEEIRNIKKKLFMDLGIVRTNCGIDNEKQDREK--AMKR 101 Query: 284 NLTKMMI 304 +T+ ++ Sbjct: 102 KVTETIV 108 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,207,092 Number of Sequences: 27780 Number of extensions: 273155 Number of successful extensions: 987 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 943 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 987 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 2029935014 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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