Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1584
(821 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 26 0.37
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 24 2.0
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 24 2.0
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 24 2.0
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 23 2.6
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 23 2.6
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 23 3.4
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 22 6.0
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 22 7.9
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 22 7.9
AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier... 22 7.9
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 26.2 bits (55), Expect = 0.37
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 8 NDSFVEDISRVSPEKLIPSSPDRRSTVKNQSENVQNVENTPKS 136
N SF++++ R S E IP + +NQ + + + P+S
Sbjct: 1280 NGSFLDNLIRSSLETGIPRDQRAMTEARNQQQQASSQQQIPES 1322
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 23.8 bits (49), Expect = 2.0
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = +2
Query: 53 LIPSSPDRRSTVKNQSENVQNVENTPKSSDDQIKIQSNEGKTTS 184
L+ + PD T K + NV + ++ + ++ K +EG+ T+
Sbjct: 16 LVAARPDESYTSKFDNINVDEILHSDRLLNNYFKCLMDEGRCTA 59
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 23.8 bits (49), Expect = 2.0
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = +2
Query: 53 LIPSSPDRRSTVKNQSENVQNVENTPKSSDDQIKIQSNEGKTTS 184
L+ + PD T K + NV + ++ + ++ K +EG+ T+
Sbjct: 16 LVAARPDESYTSKFDNINVDEILHSDRLLNNYFKCLMDEGRCTA 59
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 23.8 bits (49), Expect = 2.0
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = +2
Query: 53 LIPSSPDRRSTVKNQSENVQNVENTPKSSDDQIKIQSNEGKTTS 184
L+ + PD T K + NV + ++ + ++ K +EG+ T+
Sbjct: 16 LVAARPDESYTSKFDNINVDEILHSDRLLNNYFKCLMDEGRCTA 59
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 23.4 bits (48), Expect = 2.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 671 GFYTNCGFNMIWNVVI*EVFIACI 600
GF T C F+ + + +VF+ CI
Sbjct: 201 GFLTTCSFDFLTDDEDTKVFVTCI 224
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 23.4 bits (48), Expect = 2.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 671 GFYTNCGFNMIWNVVI*EVFIACI 600
GF T C F+ + + +VF+ CI
Sbjct: 201 GFLTTCSFDFLTDDEDTKVFVTCI 224
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 23.0 bits (47), Expect = 3.4
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +2
Query: 92 NQSENVQNVENTPKSSDDQIKIQSNEGKTTS 184
NQ++N+QN N ++ K +N K +
Sbjct: 418 NQNDNIQNTNNQNDNNQKNNKKNANNQKNNN 448
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 22.2 bits (45), Expect = 6.0
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +1
Query: 271 ENEKESDQNDDIAAVNSSKPKII 339
ENE ESD D + S P+ +
Sbjct: 347 ENENESDYQDAFCNIVSCSPQTV 369
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 7.9
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +3
Query: 27 IFPEFLPKN*FHLAP 71
+FP F+P N + L P
Sbjct: 149 LFPRFIPPNAYRLRP 163
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 21.8 bits (44), Expect = 7.9
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 191 IKEDLFLGLELEKSSTDNKKSEQNK 265
+KE + G E+EKS D+ ++ +K
Sbjct: 51 LKEIVIGGFEIEKSEDDSFNNQADK 75
>AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier
protein JHBP-1 protein.
Length = 253
Score = 21.8 bits (44), Expect = 7.9
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = +3
Query: 549 MFLKEINETYQEVMTLCDTSYKDLLDNNIP 638
+ KE+ Y+E +L T + + N +P
Sbjct: 216 LLFKELQAAYEETFSLVFTKIDNEIFNRVP 245
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,408
Number of Sequences: 438
Number of extensions: 3625
Number of successful extensions: 28
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26217432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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