Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1583
         (720 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    23   3.3  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   7.6  

>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = -2

Query: 560 KSVCTLSQGLISNDILFLCY*HCFSLIYYHFQRLSVSSASQAHSQPGNFL 411
           +S C+ SQ ++S         +C++   Y+     +SS++ +HSQ GN L
Sbjct: 233 RSWCSSSQPVLSTTNSTT---NCYNNYPYYSNMDYLSSSTMSHSQFGNGL 279


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -2

Query: 719 KSRSSNSLVGFSST*RSSIFGKVQTLTLVSMPPVAIN 609
           KS ++ +  GF    RS++FG + T T   +  +  N
Sbjct: 335 KSVANFTAAGFFDVKRSTLFGILATTTTYLIVTIQFN 371


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,953
Number of Sequences: 336
Number of extensions: 3921
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)