Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1583
(720 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0369 - 22760383-22760440,22761410-22761497,22761582-227616... 39 0.003
02_04_0131 - 20046033-20046505,20047140-20047233,20047343-200474... 35 0.057
01_01_0590 + 4396958-4397155,4397246-4397335,4397445-4397583,439... 34 0.099
01_01_0542 + 3975500-3975546,3976273-3976370,3976694-3976830,397... 34 0.099
04_03_0897 - 20646750-20646918,20647927-20648038,20649650-206501... 34 0.13
01_05_0653 - 23948911-23948937,23949031-23949141,23949361-239494... 34 0.13
01_05_0652 - 23934604-23934636,23934783-23934893,23935000-239351... 34 0.13
01_06_0923 + 33044283-33044433,33044826-33045242,33046209-330465... 31 0.70
07_01_0631 + 4714843-4715016,4715149-4715249,4715972-4716104,471... 31 0.92
10_08_0491 - 18283404-18283482,18283590-18283658,18283767-182838... 31 1.2
06_03_0756 + 24244313-24244999 31 1.2
04_04_0835 + 28538032-28539006,28539113-28539203,28539291-285394... 31 1.2
03_06_0324 + 33133081-33133260,33133381-33133481,33133665-331337... 31 1.2
03_06_0767 + 36126254-36126264,36126676-36126769,36127068-361273... 30 1.6
04_04_1596 + 34684943-34686340,34688085-34688175,34688290-346883... 30 2.1
03_05_0969 + 29283905-29284570,29284862-29284930,29286533-292866... 30 2.1
03_01_0107 + 849489-850652,850745-850835,850926-851083,851180-85... 30 2.1
01_01_0742 + 5759505-5759639,5760497-5760593,5760694-5760755,576... 30 2.1
03_01_0618 + 4543013-4543111,4544100-4544177,4544739-4544873,454... 29 2.8
09_06_0320 - 22297579-22297760,22298433-22299358,22299422-222997... 29 4.9
03_02_1033 + 13550955-13551700,13552837-13553290,13553451-135536... 29 4.9
03_02_1031 + 13541327-13542072,13543209-13543662,13543823-135440... 29 4.9
02_01_0471 - 3364215-3364912,3365511-3365742,3365827-3366198,336... 29 4.9
10_08_0316 - 16688911-16689044,16689141-16689211,16689303-166893... 28 6.5
06_03_1130 - 27826384-27827039,27827800-27828031,27828120-278284... 28 6.5
05_06_0102 - 25589011-25589181,25589269-25589496,25589589-255899... 28 6.5
05_01_0063 + 446761-447681 28 6.5
06_01_0915 - 7054701-7055809,7056062-7056359 28 8.6
05_07_0039 - 27239362-27239478,27240570-27241463 28 8.6
05_01_0425 - 3347604-3347708,3348394-3348466,3349917-3350581,335... 28 8.6
03_05_1096 - 30364144-30365310,30365825-30365971,30366087-303663... 28 8.6
03_02_0608 - 9818020-9818192,9818723-9818906,9818991-9819323,981... 28 8.6
01_01_0974 + 7678211-7678276,7678974-7679063,7679144-7679255,767... 28 8.6
>11_06_0369 -
22760383-22760440,22761410-22761497,22761582-22761649,
22761742-22761858,22761964-22762084,22762172-22762247,
22762336-22762435,22762524-22762615,22763514-22763664,
22764698-22764792,22764900-22765193
Length = 419
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +1
Query: 529 IRPCDSVQTDFSNDPLQRVVRISNNGKLMATGGIDTKVRVWTFPKMELLYVLEKP-TK-E 702
+R T+ S+ LQ V S G ++ATGG D +RV+ +P M+ +LE+P TK
Sbjct: 147 LRADQEALTELSDAGLQLAVSFSGEGSILATGGEDGHLRVFKWPSMD--SILEEPDTKTS 204
Query: 703 LDDLDF 720
+ DL F
Sbjct: 205 VKDLTF 210
>02_04_0131 -
20046033-20046505,20047140-20047233,20047343-20047434,
20047560-20047611,20047721-20047878,20048190-20048280,
20048397-20049455
Length = 672
Score = 35.1 bits (77), Expect = 0.057
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +1
Query: 505 HKKRMSFE-IRPCDSVQTDFSNDPLQRVVRISNNGKLMATGGIDTKVRVWTFPKME 669
+KK M F + C +Q +++ L RV++ S++G +A+GG D VRVW ++E
Sbjct: 242 NKKWMDFTAVYMCQEIQ---AHEGLIRVMKFSSSGWHLASGGEDCVVRVWQITEVE 294
>01_01_0590 +
4396958-4397155,4397246-4397335,4397445-4397583,
4398125-4398243,4398492-4398559,4399409-4399457,
4399713-4400732
Length = 560
Score = 34.3 bits (75), Expect = 0.099
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 586 VRISNNGKLMATGGIDTKVRVWTFPKMELLYVLEKPTKELD 708
+ G LMAT G+D KV++W K E++ + LD
Sbjct: 313 IAFDRGGHLMATAGVDRKVKIWDLRKYEVINSYAARAQSLD 353
>01_01_0542 +
3975500-3975546,3976273-3976370,3976694-3976830,
3977518-3977871,3977953-3978041,3978502-3978589,
3978659-3978734,3978858-3978907,3979032-3979340,
3979803-3979982,3980086-3980325,3980471-3980582,
3980931-3981040,3981162-3981311,3981777-3981932,
3982289-3982405,3982759-3982839,3983338-3983478
Length = 844
Score = 34.3 bits (75), Expect = 0.099
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +1
Query: 595 SNNGKLMATGGIDTKVRVWTFPKMELLYVLEKPTKELDDLDF 720
S++GKL+ATGG D KV +W ++ VLE+ + + D+ F
Sbjct: 616 SSDGKLLATGGHDKKVVLWHAETLKQKSVLEEHSLLITDVRF 657
>04_03_0897 -
20646750-20646918,20647927-20648038,20649650-20650108,
20650237-20650330,20650449-20650525,20650637-20650688,
20650770-20650927,20651191-20651281,20651465-20652529
Length = 758
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +1
Query: 505 HKKRMSFEIRPCDSVQTDFSNDPLQRVVRISNNGKLMATGGIDTKVRVWTFPKME 669
H+K+ + E Q ++ L +V++ S +G +ATGG D VR+W ++E
Sbjct: 234 HRKKKTMEFSAVHLGQEIQAHKGLIKVMKFSPSGWYLATGGEDCIVRIWQIMEVE 288
>01_05_0653 -
23948911-23948937,23949031-23949141,23949361-23949441,
23949865-23949984,23950088-23950252,23950344-23950493,
23950565-23950674,23951401-23951518,23951597-23951827,
23952345-23952524,23953639-23953908,23954930-23954979,
23955213-23955288,23955396-23955483,23956010-23956101,
23956200-23956529,23957484-23957593,23957810-23957907,
23959538-23959566
Length = 811
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +1
Query: 595 SNNGKLMATGGIDTKVRVWTFPKMELLYVLEKPTKELDDLDF 720
S++GKL+ATGG D KV +W + + + E+ + + D+ F
Sbjct: 580 SSDGKLLATGGHDKKVVLWFTDDLNIKAIFEEHSMIITDVRF 621
>01_05_0652 -
23934604-23934636,23934783-23934893,23935000-23935188,
23935893-23936012,23936109-23936273,23936638-23936790,
23936867-23936976,23937280-23937397,23938197-23938427,
23938984-23939175,23939661-23939945,23940637-23940686,
23940846-23940921,23941048-23941135,23941689-23941771,
23941883-23942248,23942462-23942476,23942909-23943018,
23943134-23943231,23943961-23944019
Length = 883
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +1
Query: 595 SNNGKLMATGGIDTKVRVW-TFPKMELLYVLEKPTKELDDLDF 720
S++GKL+ATGG D KV +W T P ++ LE+ + + D+ F
Sbjct: 613 SSDGKLLATGGHDKKVLLWCTEPALKPTSSLEEHSALITDVRF 655
>01_06_0923 +
33044283-33044433,33044826-33045242,33046209-33046538,
33046806-33046876,33047283-33047357,33047435-33047578,
33047645-33047816,33047933-33048616,33048711-33048767,
33048850-33048956,33049485-33049610,33050221-33050295,
33050387-33050499,33050789-33050905,33051384-33051444,
33051690-33051763,33052267-33052388,33052472-33052620,
33053525-33053635,33053946-33054008,33054689-33054722,
33055253-33055375,33055971-33056033,33056130-33056196,
33056311-33056356,33056446-33056552,33056923-33056971,
33057208-33057273,33057544-33057630
Length = 1286
Score = 31.5 bits (68), Expect = 0.70
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +1
Query: 580 RVVRISNNGKLMATGGIDTKVRVWTFPKMELLYVLEKPTKELDDLDF 720
R +R + +G+ + TGG D V+VW +LL+ + + ++ +DF
Sbjct: 244 RTIRFTPDGRWVVTGGEDNIVKVWDLTAGKLLHDFKFHSGQIRCIDF 290
>07_01_0631 +
4714843-4715016,4715149-4715249,4715972-4716104,
4716471-4716562,4716857-4716956,4717044-4717116,
4717198-4717318,4717778-4717897,4718643-4718733,
4718811-4718839,4719061-4719131,4719217-4719395
Length = 427
Score = 31.1 bits (67), Expect = 0.92
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1
Query: 577 QRVVRISNNGKLMATGGIDTKVRVWTFPKMELLYVLEKPTKELDDLD 717
Q+ + S +G A GG D +R++ +P M +L K K D+D
Sbjct: 119 QKCLAFSTDGSKFAIGGEDGHLRIFHWPSMNVLLDEPKAHKSFRDMD 165
>10_08_0491 -
18283404-18283482,18283590-18283658,18283767-18283883,
18283953-18284068,18284149-18284223,18284248-18284430,
18284530-18284591,18284668-18285606,18285723-18285846,
18285917-18286060,18286151-18286225,18286359-18286382,
18287025-18287095,18287305-18287407,18287555-18287781,
18287910-18288027,18288220-18288311,18288793-18288874
Length = 899
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +1
Query: 583 VVRISNNGKLMATGGIDTKVRVWTFPKMELLYVLEKPTKELDDLDF 720
V+R + +G+ + +GG D V++W +LL+ ++ LDF
Sbjct: 153 VLRFTPDGRWIVSGGSDNSVKIWDLTAGKLLHDFRNHEGPINCLDF 198
>06_03_0756 + 24244313-24244999
Length = 228
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 307 RKEHPEPDVPHSGTREPLSAVQGEHP 384
+++ P P +PH R PL +QG HP
Sbjct: 151 QQQPPRPPLPHHCARLPLQQLQGRHP 176
>04_04_0835 +
28538032-28539006,28539113-28539203,28539291-28539448,
28539543-28539594,28539707-28539786,28539890-28539983,
28540078-28540633,28541160-28541259,28541576-28541617,
28542445-28542588
Length = 763
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +1
Query: 511 KRMSFEIRPCDSVQTDFSNDPLQRVVRISNNGKLMATGGIDTKVRVWTFPKME 669
++ S E+ Q ++D ++ S +G+L+ATGG D VRVW + E
Sbjct: 194 RKRSKELSAVYQGQVIKAHDGAILTMKFSPDGQLLATGGEDGVVRVWAVMQSE 246
>03_06_0324 +
33133081-33133260,33133381-33133481,33133665-33133797,
33133936-33134027,33134309-33134408,33134505-33134577,
33134659-33134779,33135418-33135537,33136089-33136179,
33136288-33136305
Length = 342
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1
Query: 577 QRVVRISNNGKLMATGGIDTKVRVWTFPKMELLYVLEKPTKELDDLD 717
Q+ + S +G A GG D +R++ +P + LL K K D+D
Sbjct: 121 QKCLSFSTDGAKFAVGGEDGHLRIFHWPDLNLLLGEPKAHKSFRDMD 167
>03_06_0767 +
36126254-36126264,36126676-36126769,36127068-36127315,
36127391-36127647,36127949-36127998,36128056-36128286,
36128851-36128928,36129315-36129441,36129520-36129629,
36130003-36130152,36131106-36131183,36131293-36131421,
36131502-36131699,36132199-36132342
Length = 634
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +1
Query: 595 SNNGKLMATGGIDTKVRVWTFPKMELLYVLEKPTKELDDLDF 720
S +GKL+A+ G + KV +W + + +E+ T + D+ F
Sbjct: 388 STDGKLLASAGHEKKVFLWNMDNLNMDTKIEEHTNFITDIRF 429
>04_04_1596 +
34684943-34686340,34688085-34688175,34688290-34688354,
34688530-34688581,34688747-34688829,34688942-34689035,
34689468-34690051
Length = 788
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 241 PLCDSSNISNPFATPVFDAPPPPATMTCRFVKVWSV*SGKSTLANNPS 98
P SS+ +P +P +PP PA + + S GK LA NPS
Sbjct: 123 PRVSSSSPRSPTPSPPSSSPPRPAPVVAAAEEPRSSGHGKPPLARNPS 170
>03_05_0969 +
29283905-29284570,29284862-29284930,29286533-29286631,
29287016-29287324
Length = 380
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 595 SNNGKLMATGGIDTKVRVWTFPKMELLYVLEKPTKELDDLDF 720
S +G ++A+G D VRVW L VL ++ + +DF
Sbjct: 122 SPHGNMLASGSFDETVRVWEVRSGRCLRVLPAHSEPVTSVDF 163
>03_01_0107 +
849489-850652,850745-850835,850926-851083,851180-851231,
852373-852452,852540-852633,852711-853231,854087-854202,
854242-854293
Length = 775
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +1
Query: 505 HKKRMSFEIRPCDSVQTDFSNDPLQRVVRISNNGKLMATGGIDTKVRVW 651
H K+ S E+ Q +++ ++ S++G+ +ATGG D VRVW
Sbjct: 250 HYKKRSKELSAVYRGQDIKAHEGAIVTMKFSSDGQYLATGGEDGVVRVW 298
>01_01_0742 +
5759505-5759639,5760497-5760593,5760694-5760755,
5760842-5760898,5761062-5761118,5761501-5761534,
5761788-5761822,5761956-5762046,5762312-5762633,
5762710-5762845,5763031-5763120
Length = 371
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +1
Query: 619 TGGIDTKVRVWTFPKMELLYVLEKPTKELDD 711
TGG+D+K+ VW F K L+ ++ + E+ +
Sbjct: 166 TGGLDSKLAVWDFSKGRTLFSIDYGSPEMQN 196
>03_01_0618 +
4543013-4543111,4544100-4544177,4544739-4544873,
4544971-4545078,4545397-4545525,4546191-4546306,
4546392-4546509,4547274-4547379,4547492-4547631,
4547735-4547905,4547984-4548094,4548206-4548317,
4548615-4548943,4549064-4549154,4549542-4549637,
4549710-4549780,4549868-4549980,4550353-4550434
Length = 734
Score = 29.5 bits (63), Expect = 2.8
Identities = 9/31 (29%), Positives = 21/31 (67%)
Frame = +1
Query: 595 SNNGKLMATGGIDTKVRVWTFPKMELLYVLE 687
++ G L+ +G DT++ +W++ ELL+ ++
Sbjct: 45 NSKGSLLLSGSDDTRIGIWSYANRELLHDID 75
>09_06_0320 -
22297579-22297760,22298433-22299358,22299422-22299747,
22300591-22300660,22301632-22301726,22301917-22302048,
22302154-22302222,22302953-22303051,22303169-22303253,
22303353-22303453,22303660-22303728,22303861-22303901,
22304085-22304303,22304444-22304470,22304562-22304660,
22304898-22305106,22305382-22305485,22305753-22305894,
22305991-22306289,22306508-22306903
Length = 1229
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = -3
Query: 415 SSSHFSSIHHADVHLVQLTVALLSRCEVRPVLDAPYGTRHHDIRTSLMA 269
+ +FS H ++ + + S V +D PY TR HD R +M+
Sbjct: 364 AKQYFSDCHSLNLLFNEASTGANSNAAV--AMDQPYSTRKHDTRDDIMS 410
>03_02_1033 +
13550955-13551700,13552837-13553290,13553451-13553648,
13553726-13553807,13554496-13554590
Length = 524
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +1
Query: 586 VRISNNGKLMATGGIDTKVRVWTFPKMELLY 678
V S NG L+ATG D R+W +LY
Sbjct: 404 VSFSPNGYLVATGSEDNFCRIWDLRTKRMLY 434
>03_02_1031 +
13541327-13542072,13543209-13543662,13543823-13544020,
13544098-13544179,13544868-13544962
Length = 524
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +1
Query: 586 VRISNNGKLMATGGIDTKVRVWTFPKMELLY 678
V S NG L+ATG D R+W +LY
Sbjct: 404 VSFSPNGYLVATGSEDNFCRIWDLRTKRMLY 434
>02_01_0471 - 3364215-3364912,3365511-3365742,3365827-3366198,
3366324-3366449,3367056-3367262,3367399-3367492,
3367575-3367621,3367705-3368157,3368261-3368560,
3368656-3369114,3369189-3369410,3369659-3369890,
3370051-3370422,3371210-3371322,3371682-3371903,
3371977-3372180,3372308-3372572,3373123-3373311,
3373441-3373768,3373843-3374248,3374339-3374648,
3375677-3375837,3376825-3376998,3377265-3377609,
3377713-3377754,3378585-3378734,3378847-3379002,
3379088-3379540,3379651-3379966,3380402-3380839,
3381475-3381697,3383538-3383852,3384033-3384095,
3384699-3384903,3385362-3385425,3386014-3386204
Length = 3048
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 586 VRISNNGKLMATGGIDTKVRVW 651
V +S++G ++ATG DT V +W
Sbjct: 2815 VAVSSDGSVIATGSYDTTVMIW 2836
>10_08_0316 -
16688911-16689044,16689141-16689211,16689303-16689354,
16689589-16689685,16689764-16689841,16689938-16690054,
16690172-16690276,16691026-16691100,16691297-16691356,
16691454-16691549,16691838-16691954,16692142-16692260,
16692349-16692490,16694204-16694290,16694852-16694914,
16695081-16695161
Length = 497
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 610 LMATGGIDTKVRVWTFPKMELLYVLEKPTKELDDLDF 720
++ATGGIDT ++ P ++L L +K++ L F
Sbjct: 205 IIATGGIDTNAVLFDRPSGQILCTLTGHSKKITSLKF 241
>06_03_1130 - 27826384-27827039,27827800-27828031,27828120-27828491,
27829243-27829449,27829611-27829704,27829806-27829870,
27829946-27830398,27830467-27830760,27830837-27831295,
27831367-27831588,27831755-27831968,27832039-27832494,
27833280-27833389,27833468-27833644,27833758-27833979,
27834048-27834167,27834274-27834383,27834552-27834607,
27835252-27835440,27835602-27835775,27836066-27836281,
27837066-27837106,27837971-27837986,27838330-27838415,
27838737-27838910,27839093-27839149,27839720-27840064,
27840175-27840216,27840377-27840496,27840575-27840724,
27840830-27841534,27841609-27841954,27842978-27843080,
27844817-27844860,27845905-27846101,27846322-27846344,
27846802-27847122,27847406-27847579,27847843-27848047,
27848817-27848880,27850097-27850278,27850291-27850350,
27850688-27850748,27851249-27851313,27851491-27851569,
27851656-27852021,27852442-27852790,27852887-27852989,
27853103-27853373,27854296-27854405,27854515-27854652
Length = 3364
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 586 VRISNNGKLMATGGIDTKVRVW 651
V +S+ G ++ATG DT V +W
Sbjct: 3145 VAVSSRGNVVATGSYDTTVMIW 3166
>05_06_0102 -
25589011-25589181,25589269-25589496,25589589-25589933,
25590406-25590777,25590957-25591049,25591150-25591401,
25592019-25593224
Length = 888
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 586 VRISNNGKLMATGGIDTKVRVWT 654
+ S + +L+ATG D KV+VWT
Sbjct: 383 IAYSPDSQLLATGADDNKVKVWT 405
>05_01_0063 + 446761-447681
Length = 306
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = -3
Query: 226 SNISNPFATPVFDA--PPPPATMTCRFVKVWSV 134
S+ S P A + D PPPPAT C ++ W +
Sbjct: 273 SSASAPAAAMLLDGSPPPPPATGFCLYLYAWKL 305
>06_01_0915 - 7054701-7055809,7056062-7056359
Length = 468
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 135 TLQTLTNRHVIVAGGGGASNTGVANGFEIFELSH 236
TL +T RHV+ AG G + + F F +H
Sbjct: 318 TLAEITRRHVLAAGAGTSKSKSKVVAFTTFSPAH 351
>05_07_0039 - 27239362-27239478,27240570-27241463
Length = 336
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 586 VRISNNGKLMATGGIDTKVRVWTFPKMELLYVLE 687
V +S +G L A+GG D +W + ++LY L+
Sbjct: 216 VAVSPDGSLCASGGKDGTTLLWDLTEGKMLYKLD 249
>05_01_0425 -
3347604-3347708,3348394-3348466,3349917-3350581,
3350609-3351088,3351253-3351534
Length = 534
Score = 27.9 bits (59), Expect = 8.6
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +2
Query: 269 RHETGPNVVMTCSVRSIQNRTYLTAGQESHCQLYKVNIRMVDAAEMRRGSFRAENGL-VR 445
+ E P V + + R + AGQ + QL + VDAA+ R GS + G +R
Sbjct: 168 QQEAAPGVRGAAAWATAPGRRTVRAGQSAAAQLAQRPGAGVDAADRRPGSTTLQGGTRLR 227
Query: 446 RRRRTVSEND 475
R V + +
Sbjct: 228 RGEEAVGDGE 237
>03_05_1096 - 30364144-30365310,30365825-30365971,30366087-30366393,
30366541-30366849,30367544-30370567,30370640-30372290,
30372373-30373463,30373544-30373646,30373737-30374439,
30374654-30375783,30375913-30376027,30376504-30376695,
30377443-30377616,30378438-30378494,30378581-30378716,
30378842-30378927,30379023-30379092,30379993-30380021,
30380444-30380456,30380762-30381006
Length = 3582
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 592 ISNNGKLMATGGIDTKVRVWTFPK 663
+S++G ++ TGG D V VW F K
Sbjct: 3342 VSHDGNILTTGGDDGVVAVWRFFK 3365
>03_02_0608 -
9818020-9818192,9818723-9818906,9818991-9819323,
9819455-9819592,9819707-9819836,9820151-9820266
Length = 357
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = -3
Query: 418 TSSSHFSSIHHADVHLVQ--LTVALLSRCEVRPVLDAPYGTRHHDI 287
T +S F + A + L++ LT L R V LD PY R HDI
Sbjct: 271 TFASMFPRVQPAALDLIERMLTFNPLQRITVEEALDHPYLERLHDI 316
>01_01_0974 +
7678211-7678276,7678974-7679063,7679144-7679255,
7679959-7679986,7680163-7680261,7680614-7680683,
7680765-7680799,7680895-7680969,7681054-7681149,
7681376-7681439,7682273-7682358,7682800-7682860,
7682956-7683020,7683255-7683360,7684142-7684230,
7684353-7684515
Length = 434
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +1
Query: 580 RVVRISNNGKLMATGGIDTKVRVWTFPKMELL 675
R + S +G L+ + G+D VR+W P ++++
Sbjct: 113 RGLATSTDGDLLVSCGVDCTVRLWKVPMLKMV 144
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,439,959
Number of Sequences: 37544
Number of extensions: 454091
Number of successful extensions: 1619
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1618
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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