Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1583
         (720 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    28   0.33 
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    26   1.0  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          25   3.1  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    25   3.1  

>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 27.9 bits (59), Expect = 0.33
 Identities = 21/67 (31%), Positives = 31/67 (46%)
 Frame = -2

Query: 665 IFGKVQTLTLVSMPPVAINFPLLLILTTRCSGSLLKSVCTLSQGLISNDILFLCY*HCFS 486
           I G + ++ ++S P +  +   LLI   RC      +V  L+  LI    L   Y H   
Sbjct: 98  ILGNIFSMVILSRPQMRSSINYLLIGLARCD-----TVLILTSVLIFG--LCAIYPHTGY 150

Query: 485 LIYYHFQ 465
           L YYH+Q
Sbjct: 151 LYYYHYQ 157


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +2

Query: 401 EMRRGSFRAENGLVRRRRRTVSENDNISKKNN 496
           E  R +  A++ L+R  R TVS+N N+S   +
Sbjct: 318 EAERNARNAQHLLLRANRLTVSDNHNLSNSGS 349


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +1

Query: 505 HKKRMSFEIRPCDSVQTDFSNDPLQRVVRISNNGKLMAT 621
           H+    F+  P +        DPL R+  I+ NG L+ T
Sbjct: 366 HRMTFCFDTVPNERPMILVFQDPLVRIEPIAENGDLLET 404


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 17/81 (20%), Positives = 22/81 (27%)
 Frame = -2

Query: 428 QPGNFLVSFQQHPPCGCSPCTADSGSLVPL*GTSGSGCSLRNTSSRH*DQSHGASPLQNK 249
           +PG  L S   H  C C  C    G   P      S  +            HG       
Sbjct: 597 RPGGLLCSGPDHGRCVCGQCECREGWTGPACDCRASNETCMPPGGGELCSGHGTCECGTC 656

Query: 248 PLPIM*QFKYFKSICDTCVRC 186
              +    +Y    C+ C  C
Sbjct: 657 RCTVTEDGRYTGRYCEKCPTC 677


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 778,343
Number of Sequences: 2352
Number of extensions: 16062
Number of successful extensions: 46
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)