Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1583
(720 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC041032-1|AAH41032.1| 417|Homo sapiens prolactin regulatory el... 62 3e-09
BC016906-1|AAH16906.1| 345|Homo sapiens PREB protein protein. 62 3e-09
BC016472-1|AAH16472.1| 417|Homo sapiens prolactin regulatory el... 62 3e-09
BC012890-1|AAH12890.1| 417|Homo sapiens prolactin regulatory el... 62 3e-09
BC002765-1|AAH02765.1| 417|Homo sapiens prolactin regulatory el... 62 3e-09
AK023064-1|BAB14385.1| 417|Homo sapiens NA, nuclear gene encodi... 62 3e-09
AF227166-1|AAF74572.1| 417|Homo sapiens prolactin regulatory bi... 62 3e-09
AF226684-1|AAG01692.1| 417|Homo sapiens prolactin regulatory el... 62 3e-09
AF203687-1|AAF19192.1| 417|Homo sapiens SEC12 protein. 62 3e-09
AC013403-6|AAX93170.1| 417|Homo sapiens unknown protein. 62 3e-09
BC111954-1|AAI11955.1| 1066|Homo sapiens WD repeat domain 67 pro... 34 0.59
BC105800-1|AAI05801.1| 349|Homo sapiens WDR67 protein protein. 34 0.59
BC101724-1|AAI01725.1| 1066|Homo sapiens WD repeat domain 67 pro... 34 0.59
BC026969-1|AAH26969.1| 154|Homo sapiens WDR67 protein protein. 34 0.59
AK094612-1|BAC04384.1| 644|Homo sapiens protein ( Homo sapiens ... 34 0.59
AK056434-1|BAB71182.1| 1066|Homo sapiens protein ( Homo sapiens ... 34 0.59
U02609-1|AAA18945.1| 519|Homo sapiens transducin-like protein p... 32 1.8
BC035409-1|AAH35409.1| 808|Homo sapiens transducin (beta)-like ... 32 1.8
BC014007-1|AAH14007.1| 808|Homo sapiens TBL3 protein protein. 32 1.8
BC010231-1|AAH10231.1| 808|Homo sapiens transducin (beta)-like ... 32 1.8
BC007620-1|AAH07620.1| 570|Homo sapiens TBL3 protein protein. 32 1.8
AB209173-1|BAD92410.1| 832|Homo sapiens transducin beta-like 3 ... 32 1.8
S63730-1|AAB27503.1| 117|Homo sapiens natural anti-DNA antibody... 31 3.1
AF083383-1|AAC64084.1| 310|Homo sapiens 38kDa splicing factor p... 30 7.3
EF560734-1|ABQ59044.1| 588|Homo sapiens ATG16L1 protein protein. 30 9.6
EF079890-1|ABN48555.1| 444|Homo sapiens ATG16 autophagy related... 30 9.6
EF079889-1|ABN48554.1| 588|Homo sapiens ATG16 autophagy related... 30 9.6
EF011621-1|ABK41111.1| 357|Homo sapiens CDW11/WDR57 protein. 30 9.6
BX537426-1|CAD97668.1| 355|Homo sapiens hypothetical protein pr... 30 9.6
BC117337-1|AAI17338.1| 523|Homo sapiens ATG16L1 protein protein. 30 9.6
BC071846-1|AAH71846.1| 475|Homo sapiens ATG16L1 protein protein. 30 9.6
BC036377-1|AAH36377.1| 415|Homo sapiens WD repeat domain 69 pro... 30 9.6
BC012137-1|AAH12137.2| 355|Homo sapiens syntaxin 5 protein. 30 9.6
BC001494-1|AAH01494.1| 357|Homo sapiens WD repeat domain 57 (U5... 30 9.6
AY398617-1|AAR32130.1| 607|Homo sapiens APG16L beta protein. 30 9.6
AY358182-1|AAQ88549.1| 470|Homo sapiens SSGL9393 protein. 30 9.6
AL451070-1|CAH71848.1| 357|Homo sapiens WD repeat domain 57 (U5... 30 9.6
AK222488-1|BAD96208.1| 317|Homo sapiens guanine nucleotide bind... 30 9.6
AK127882-1|BAC87175.1| 369|Homo sapiens protein ( Homo sapiens ... 30 9.6
AK098821-1|BAC05425.1| 415|Homo sapiens protein ( Homo sapiens ... 30 9.6
AK097409-1|BAC05039.1| 415|Homo sapiens protein ( Homo sapiens ... 30 9.6
AK000897-1|BAA91413.1| 309|Homo sapiens protein ( Homo sapiens ... 30 9.6
AF090988-1|AAC69625.1| 357|Homo sapiens U5 snRNP-specific 40 kD... 30 9.6
AF001687-1|AAB87640.1| 521|Homo sapiens U4/U6 snRNP 60 kDa prot... 30 9.6
AC073065-2|AAX93215.1| 415|Homo sapiens unknown protein. 30 9.6
AC013726-3|AAY14860.1| 523|Homo sapiens unknown protein. 30 9.6
>BC041032-1|AAH41032.1| 417|Homo sapiens prolactin regulatory
element binding protein.
Length = 417
Score = 61.7 bits (143), Expect = 3e-09
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Frame = +1
Query: 487 EKQC**HKKRMSFEIRP--CDSVQTDFSNDPLQRVVRISNNGKLMATGGIDTKVRVWTFP 660
EK+C + E+R +VQTDFS+DPLQ+VV +++ L+ATGG D VRVW P
Sbjct: 125 EKKCGAETQHEGLELRVENLQAVQTDFSSDPLQKVVCFNHDNTLLATGGTDGYVRVWKVP 184
Query: 661 KMELLYVLEKPTKELDDL 714
+E + + E++DL
Sbjct: 185 SLEKVLEFKAHEGEIEDL 202
Score = 39.1 bits (87), Expect = 0.016
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 108 LAKVDFPLYTLQTLTNRHVIVA-GGGGASNTGVANGFEIFEL 230
L + FPLY LQ + +++A GGGGA+ TG+ NG +L
Sbjct: 9 LYRAPFPLYALQVDPSTGLLIAAGGGGAAKTGIKNGVHFLQL 50
>BC016906-1|AAH16906.1| 345|Homo sapiens PREB protein protein.
Length = 345
Score = 61.7 bits (143), Expect = 3e-09
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Frame = +1
Query: 487 EKQC**HKKRMSFEIRP--CDSVQTDFSNDPLQRVVRISNNGKLMATGGIDTKVRVWTFP 660
EK+C + E+R +VQTDFS+DPLQ+VV +++ L+ATGG D VRVW P
Sbjct: 53 EKKCGAETQHEGLELRVENLQAVQTDFSSDPLQKVVCFNHDNTLLATGGTDGYVRVWKVP 112
Query: 661 KMELLYVLEKPTKELDDL 714
+E + + E++DL
Sbjct: 113 SLEKVLEFKAHEGEIEDL 130
>BC016472-1|AAH16472.1| 417|Homo sapiens prolactin regulatory
element binding protein.
Length = 417
Score = 61.7 bits (143), Expect = 3e-09
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Frame = +1
Query: 487 EKQC**HKKRMSFEIRP--CDSVQTDFSNDPLQRVVRISNNGKLMATGGIDTKVRVWTFP 660
EK+C + E+R +VQTDFS+DPLQ+VV +++ L+ATGG D VRVW P
Sbjct: 125 EKKCGAETQHEGLELRVENLQAVQTDFSSDPLQKVVCFNHDNTLLATGGTDGYVRVWKVP 184
Query: 661 KMELLYVLEKPTKELDDL 714
+E + + E++DL
Sbjct: 185 SLEKVLEFKAHEGEIEDL 202
Score = 39.1 bits (87), Expect = 0.016
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 108 LAKVDFPLYTLQTLTNRHVIVA-GGGGASNTGVANGFEIFEL 230
L + FPLY LQ + +++A GGGGA+ TG+ NG +L
Sbjct: 9 LYRAPFPLYALQVDPSTGLLIAAGGGGAAKTGIKNGVHFLQL 50
>BC012890-1|AAH12890.1| 417|Homo sapiens prolactin regulatory
element binding protein.
Length = 417
Score = 61.7 bits (143), Expect = 3e-09
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Frame = +1
Query: 487 EKQC**HKKRMSFEIRP--CDSVQTDFSNDPLQRVVRISNNGKLMATGGIDTKVRVWTFP 660
EK+C + E+R +VQTDFS+DPLQ+VV +++ L+ATGG D VRVW P
Sbjct: 125 EKKCGAETQHEGLELRVENLQAVQTDFSSDPLQKVVCFNHDNTLLATGGTDGYVRVWKVP 184
Query: 661 KMELLYVLEKPTKELDDL 714
+E + + E++DL
Sbjct: 185 SLEKVLEFKAHEGEIEDL 202
Score = 39.1 bits (87), Expect = 0.016
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 108 LAKVDFPLYTLQTLTNRHVIVA-GGGGASNTGVANGFEIFEL 230
L + FPLY LQ + +++A GGGGA+ TG+ NG +L
Sbjct: 9 LYRAPFPLYALQVDPSTGLLIAAGGGGAAKTGIKNGVHFLQL 50
>BC002765-1|AAH02765.1| 417|Homo sapiens prolactin regulatory
element binding protein.
Length = 417
Score = 61.7 bits (143), Expect = 3e-09
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Frame = +1
Query: 487 EKQC**HKKRMSFEIRP--CDSVQTDFSNDPLQRVVRISNNGKLMATGGIDTKVRVWTFP 660
EK+C + E+R +VQTDFS+DPLQ+VV +++ L+ATGG D VRVW P
Sbjct: 125 EKKCGAETQHEGLELRVENLQAVQTDFSSDPLQKVVCFNHDNTLLATGGTDGYVRVWKVP 184
Query: 661 KMELLYVLEKPTKELDDL 714
+E + + E++DL
Sbjct: 185 SLEKVLEFKAHEGEIEDL 202
Score = 39.1 bits (87), Expect = 0.016
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 108 LAKVDFPLYTLQTLTNRHVIVA-GGGGASNTGVANGFEIFEL 230
L + FPLY LQ + +++A GGGGA+ TG+ NG +L
Sbjct: 9 LYRAPFPLYALQVDPSTGLLIAAGGGGAAKTGIKNGVHFLQL 50
>AK023064-1|BAB14385.1| 417|Homo sapiens NA, nuclear gene encoding
mitochondrial protein.
Length = 417
Score = 61.7 bits (143), Expect = 3e-09
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Frame = +1
Query: 487 EKQC**HKKRMSFEIRP--CDSVQTDFSNDPLQRVVRISNNGKLMATGGIDTKVRVWTFP 660
EK+C + E+R +VQTDFS+DPLQ+VV +++ L+ATGG D VRVW P
Sbjct: 125 EKKCGAETQHEGLELRVENLQAVQTDFSSDPLQKVVCFNHDNTLLATGGTDGYVRVWKVP 184
Query: 661 KMELLYVLEKPTKELDDL 714
+E + + E++DL
Sbjct: 185 SLEKVLEFKAHEGEIEDL 202
Score = 39.1 bits (87), Expect = 0.016
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 108 LAKVDFPLYTLQTLTNRHVIVA-GGGGASNTGVANGFEIFEL 230
L + FPLY LQ + +++A GGGGA+ TG+ NG +L
Sbjct: 9 LYRAPFPLYALQVDPSTGLLIAAGGGGAAKTGIKNGVHFLQL 50
>AF227166-1|AAF74572.1| 417|Homo sapiens prolactin regulatory
binding-element protein protein.
Length = 417
Score = 61.7 bits (143), Expect = 3e-09
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Frame = +1
Query: 487 EKQC**HKKRMSFEIRP--CDSVQTDFSNDPLQRVVRISNNGKLMATGGIDTKVRVWTFP 660
EK+C + E+R +VQTDFS+DPLQ+VV +++ L+ATGG D VRVW P
Sbjct: 125 EKKCGAETQHEGLELRVENLQAVQTDFSSDPLQKVVCFNHDNTLLATGGTDGYVRVWKVP 184
Query: 661 KMELLYVLEKPTKELDDL 714
+E + + E++DL
Sbjct: 185 SLEKVLEFKAHEGEIEDL 202
Score = 39.1 bits (87), Expect = 0.016
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 108 LAKVDFPLYTLQTLTNRHVIVA-GGGGASNTGVANGFEIFEL 230
L + FPLY LQ + +++A GGGGA+ TG+ NG +L
Sbjct: 9 LYRAPFPLYALQVDPSTGLLIAAGGGGAAKTGIKNGVHFLQL 50
>AF226684-1|AAG01692.1| 417|Homo sapiens prolactin regulatory
element-binding protein protein.
Length = 417
Score = 61.7 bits (143), Expect = 3e-09
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Frame = +1
Query: 487 EKQC**HKKRMSFEIRP--CDSVQTDFSNDPLQRVVRISNNGKLMATGGIDTKVRVWTFP 660
EK+C + E+R +VQTDFS+DPLQ+VV +++ L+ATGG D VRVW P
Sbjct: 125 EKKCGAETQHEGLELRVENLQAVQTDFSSDPLQKVVCFNHDNTLLATGGTDGYVRVWKVP 184
Query: 661 KMELLYVLEKPTKELDDL 714
+E + + E++DL
Sbjct: 185 SLEKVLEFKAHEGEIEDL 202
Score = 37.5 bits (83), Expect = 0.048
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 108 LAKVDFPLYTLQTLTNRHVIVA-GGGGASNTGVANGFEIFEL 230
L + FPLY Q + +++A GGGGA+ TG+ NG +L
Sbjct: 9 LYRAPFPLYAFQVDPSTGLLIAAGGGGAAKTGIKNGVHFLQL 50
>AF203687-1|AAF19192.1| 417|Homo sapiens SEC12 protein.
Length = 417
Score = 61.7 bits (143), Expect = 3e-09
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Frame = +1
Query: 487 EKQC**HKKRMSFEIRP--CDSVQTDFSNDPLQRVVRISNNGKLMATGGIDTKVRVWTFP 660
EK+C + E+R +VQTDFS+DPLQ+VV +++ L+ATGG D VRVW P
Sbjct: 125 EKKCGAETQHEGLELRVENLQAVQTDFSSDPLQKVVCFNHDNTLLATGGTDGYVRVWKVP 184
Query: 661 KMELLYVLEKPTKELDDL 714
+E + + E++DL
Sbjct: 185 SLEKVLEFKAHEGEIEDL 202
Score = 39.1 bits (87), Expect = 0.016
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 108 LAKVDFPLYTLQTLTNRHVIVA-GGGGASNTGVANGFEIFEL 230
L + FPLY LQ + +++A GGGGA+ TG+ NG +L
Sbjct: 9 LYRAPFPLYALQVDPSTGLLIAAGGGGAAKTGIKNGVHFLQL 50
>AC013403-6|AAX93170.1| 417|Homo sapiens unknown protein.
Length = 417
Score = 61.7 bits (143), Expect = 3e-09
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Frame = +1
Query: 487 EKQC**HKKRMSFEIRP--CDSVQTDFSNDPLQRVVRISNNGKLMATGGIDTKVRVWTFP 660
EK+C + E+R +VQTDFS+DPLQ+VV +++ L+ATGG D VRVW P
Sbjct: 125 EKKCGAETQHEGLELRVENLQAVQTDFSSDPLQKVVCFNHDNTLLATGGTDGYVRVWKVP 184
Query: 661 KMELLYVLEKPTKELDDL 714
+E + + E++DL
Sbjct: 185 SLEKVLEFKAHEGEIEDL 202
Score = 39.1 bits (87), Expect = 0.016
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 108 LAKVDFPLYTLQTLTNRHVIVA-GGGGASNTGVANGFEIFEL 230
L + FPLY LQ + +++A GGGGA+ TG+ NG +L
Sbjct: 9 LYRAPFPLYALQVDPSTGLLIAAGGGGAAKTGIKNGVHFLQL 50
>BC111954-1|AAI11955.1| 1066|Homo sapiens WD repeat domain 67
protein.
Length = 1066
Score = 33.9 bits (74), Expect = 0.59
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = +1
Query: 562 SNDPLQRVVRISNNGKLMATGGIDTKVRVWTFPKMELLYVLEKPTK 699
S+ L +V ++ +G+++A GG + +W +L +++ PTK
Sbjct: 212 SSSILYKVFAVTRDGRILAAGGKSNHLHLWCLEARQLFRIIQMPTK 257
>BC105800-1|AAI05801.1| 349|Homo sapiens WDR67 protein protein.
Length = 349
Score = 33.9 bits (74), Expect = 0.59
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = +1
Query: 562 SNDPLQRVVRISNNGKLMATGGIDTKVRVWTFPKMELLYVLEKPTK 699
S+ L +V ++ +G+++A GG + +W +L +++ PTK
Sbjct: 212 SSSILYKVFAVTRDGRILAAGGKSNHLHLWCLEARQLFRIIQMPTK 257
>BC101724-1|AAI01725.1| 1066|Homo sapiens WD repeat domain 67
protein.
Length = 1066
Score = 33.9 bits (74), Expect = 0.59
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = +1
Query: 562 SNDPLQRVVRISNNGKLMATGGIDTKVRVWTFPKMELLYVLEKPTK 699
S+ L +V ++ +G+++A GG + +W +L +++ PTK
Sbjct: 212 SSSILYKVFAVTRDGRILAAGGKSNHLHLWCLEARQLFRIIQMPTK 257
>BC026969-1|AAH26969.1| 154|Homo sapiens WDR67 protein protein.
Length = 154
Score = 33.9 bits (74), Expect = 0.59
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = +1
Query: 562 SNDPLQRVVRISNNGKLMATGGIDTKVRVWTFPKMELLYVLEKPTK 699
S+ L +V ++ +G+++A GG + +W +L +++ PTK
Sbjct: 15 SSSILYKVFAVTRDGRILAAGGKSNHLHLWCLEARQLFRIIQMPTK 60
>AK094612-1|BAC04384.1| 644|Homo sapiens protein ( Homo sapiens
cDNA FLJ37293 fis, clone BRAMY2014813. ).
Length = 644
Score = 33.9 bits (74), Expect = 0.59
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = +1
Query: 562 SNDPLQRVVRISNNGKLMATGGIDTKVRVWTFPKMELLYVLEKPTK 699
S+ L +V ++ +G+++A GG + +W +L +++ PTK
Sbjct: 107 SSSILYKVFAVTRDGRILAAGGKSNHLHLWCLEARQLFRIIQMPTK 152
>AK056434-1|BAB71182.1| 1066|Homo sapiens protein ( Homo sapiens
cDNA FLJ31872 fis, clone NT2RP7002376, weakly similar to
M PROTEIN, SEROTYPE 2.1 PRECURSOR. ).
Length = 1066
Score = 33.9 bits (74), Expect = 0.59
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = +1
Query: 562 SNDPLQRVVRISNNGKLMATGGIDTKVRVWTFPKMELLYVLEKPTK 699
S+ L +V ++ +G+++A GG + +W +L +++ PTK
Sbjct: 212 SSSILYKVFAVTRDGRILAAGGKSNHLHLWCLEARQLFRIIQMPTK 257
>U02609-1|AAA18945.1| 519|Homo sapiens transducin-like protein
protein.
Length = 519
Score = 32.3 bits (70), Expect = 1.8
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 586 VRISNNGKLMATGGIDTKVRVWTFPKMELLYV 681
V I+ N KL+ATG D ++W P+ +LL V
Sbjct: 371 VAIAPNDKLLATGSQDRTAKLWALPQCQLLGV 402
>BC035409-1|AAH35409.1| 808|Homo sapiens transducin (beta)-like 3
protein.
Length = 808
Score = 32.3 bits (70), Expect = 1.8
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 586 VRISNNGKLMATGGIDTKVRVWTFPKMELLYV 681
V I+ N KL+ATG D ++W P+ +LL V
Sbjct: 485 VAIAPNDKLLATGSQDRTAKLWALPQCQLLGV 516
>BC014007-1|AAH14007.1| 808|Homo sapiens TBL3 protein protein.
Length = 808
Score = 32.3 bits (70), Expect = 1.8
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 586 VRISNNGKLMATGGIDTKVRVWTFPKMELLYV 681
V I+ N KL+ATG D ++W P+ +LL V
Sbjct: 485 VAIAPNDKLLATGSQDRTAKLWALPQCQLLGV 516
>BC010231-1|AAH10231.1| 808|Homo sapiens transducin (beta)-like 3
protein.
Length = 808
Score = 32.3 bits (70), Expect = 1.8
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 586 VRISNNGKLMATGGIDTKVRVWTFPKMELLYV 681
V I+ N KL+ATG D ++W P+ +LL V
Sbjct: 485 VAIAPNDKLLATGSQDRTAKLWALPQCQLLGV 516
>BC007620-1|AAH07620.1| 570|Homo sapiens TBL3 protein protein.
Length = 570
Score = 32.3 bits (70), Expect = 1.8
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 586 VRISNNGKLMATGGIDTKVRVWTFPKMELLYV 681
V I+ N KL+ATG D ++W P+ +LL V
Sbjct: 247 VAIAPNDKLLATGSQDRTAKLWALPQCQLLGV 278
>AB209173-1|BAD92410.1| 832|Homo sapiens transducin beta-like 3
variant protein.
Length = 832
Score = 32.3 bits (70), Expect = 1.8
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 586 VRISNNGKLMATGGIDTKVRVWTFPKMELLYV 681
V I+ N KL+ATG D ++W P+ +LL V
Sbjct: 509 VAIAPNDKLLATGSQDRTAKLWALPQCQLLGV 540
>S63730-1|AAB27503.1| 117|Homo sapiens natural anti-DNA antibody
Kim11.4 light chain variable region protein.
Length = 117
Score = 31.5 bits (68), Expect = 3.1
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2
Query: 611 NFPLLLILTTRCSGSLLKSVCT 546
+FPLLL L TRC+GS +SV T
Sbjct: 3 SFPLLLTLLTRCAGSWAQSVLT 24
>AF083383-1|AAC64084.1| 310|Homo sapiens 38kDa splicing factor
protein.
Length = 310
Score = 30.3 bits (65), Expect = 7.3
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 523 FEIRPCDSVQTDFSNDPLQRVVRISNNGKLMATGGIDTKVRVWTFPKMELLYVL 684
++IR +VQT F N V ++ + +GGID ++VW + +L Y +
Sbjct: 120 WDIRKKAAVQT-FQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTM 172
>EF560734-1|ABQ59044.1| 588|Homo sapiens ATG16L1 protein protein.
Length = 588
Score = 29.9 bits (64), Expect = 9.6
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +1
Query: 526 EIR-PCDSVQTDFSNDPLQRVVRISNNGKLMATGGIDTKVRVW 651
E+R P ++ ++D V+ S +L+ATGG+D +V++W
Sbjct: 288 EVRVPATALCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLW 330
>EF079890-1|ABN48555.1| 444|Homo sapiens ATG16 autophagy related
16-like protein 1 protein.
Length = 444
Score = 29.9 bits (64), Expect = 9.6
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +1
Query: 526 EIR-PCDSVQTDFSNDPLQRVVRISNNGKLMATGGIDTKVRVW 651
E+R P ++ ++D V+ S +L+ATGG+D +V++W
Sbjct: 144 EVRVPATALCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLW 186
>EF079889-1|ABN48554.1| 588|Homo sapiens ATG16 autophagy related
16-like protein 1 protein.
Length = 588
Score = 29.9 bits (64), Expect = 9.6
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +1
Query: 526 EIR-PCDSVQTDFSNDPLQRVVRISNNGKLMATGGIDTKVRVW 651
E+R P ++ ++D V+ S +L+ATGG+D +V++W
Sbjct: 288 EVRVPATALCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLW 330
>EF011621-1|ABK41111.1| 357|Homo sapiens CDW11/WDR57 protein.
Length = 357
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +1
Query: 523 FEIRPCDSVQTDFSNDPLQRVVRISNNGKLMATGGIDTKVRVWTFPKMELLYVL 684
++IR ++QT F N V ++ + +GGID ++VW + +L Y +
Sbjct: 179 WDIRKKAAIQT-FQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTM 231
>BX537426-1|CAD97668.1| 355|Homo sapiens hypothetical protein
protein.
Length = 355
Score = 29.9 bits (64), Expect = 9.6
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -3
Query: 229 SSNISNPFATPVFDAPPPPATMTCR 155
SS+I+ P PV PPPP TM+CR
Sbjct: 35 SSDIA-PLPPPVTLVPPPPDTMSCR 58
>BC117337-1|AAI17338.1| 523|Homo sapiens ATG16L1 protein protein.
Length = 523
Score = 29.9 bits (64), Expect = 9.6
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +1
Query: 526 EIR-PCDSVQTDFSNDPLQRVVRISNNGKLMATGGIDTKVRVW 651
E+R P ++ ++D V+ S +L+ATGG+D +V++W
Sbjct: 223 EVRVPATALCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLW 265
>BC071846-1|AAH71846.1| 475|Homo sapiens ATG16L1 protein protein.
Length = 475
Score = 29.9 bits (64), Expect = 9.6
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +1
Query: 526 EIR-PCDSVQTDFSNDPLQRVVRISNNGKLMATGGIDTKVRVW 651
E+R P ++ ++D V+ S +L+ATGG+D +V++W
Sbjct: 175 EVRVPATALCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLW 217
>BC036377-1|AAH36377.1| 415|Homo sapiens WD repeat domain 69
protein.
Length = 415
Score = 29.9 bits (64), Expect = 9.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 610 LMATGGIDTKVRVWTFPKMELLYVLEKPTKELDDLDF 720
L+ATG +DT ++W E +Y L + E+ L F
Sbjct: 191 LVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSF 227
>BC012137-1|AAH12137.2| 355|Homo sapiens syntaxin 5 protein.
Length = 355
Score = 29.9 bits (64), Expect = 9.6
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -3
Query: 229 SSNISNPFATPVFDAPPPPATMTCR 155
SS+I+ P PV PPPP TM+CR
Sbjct: 35 SSDIA-PLPPPVTLVPPPPDTMSCR 58
>BC001494-1|AAH01494.1| 357|Homo sapiens WD repeat domain 57 (U5
snRNP specific) protein.
Length = 357
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +1
Query: 523 FEIRPCDSVQTDFSNDPLQRVVRISNNGKLMATGGIDTKVRVWTFPKMELLYVL 684
++IR ++QT F N V ++ + +GGID ++VW + +L Y +
Sbjct: 179 WDIRKKAAIQT-FQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTM 231
>AY398617-1|AAR32130.1| 607|Homo sapiens APG16L beta protein.
Length = 607
Score = 29.9 bits (64), Expect = 9.6
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +1
Query: 526 EIR-PCDSVQTDFSNDPLQRVVRISNNGKLMATGGIDTKVRVW 651
E+R P ++ ++D V+ S +L+ATGG+D +V++W
Sbjct: 307 EVRVPATALCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLW 349
>AY358182-1|AAQ88549.1| 470|Homo sapiens SSGL9393 protein.
Length = 470
Score = 29.9 bits (64), Expect = 9.6
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +1
Query: 526 EIR-PCDSVQTDFSNDPLQRVVRISNNGKLMATGGIDTKVRVW 651
E+R P ++ ++D V+ S +L+ATGG+D +V++W
Sbjct: 307 EVRVPATALCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLW 349
>AL451070-1|CAH71848.1| 357|Homo sapiens WD repeat domain 57 (U5
snRNP specific) protein.
Length = 357
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +1
Query: 523 FEIRPCDSVQTDFSNDPLQRVVRISNNGKLMATGGIDTKVRVWTFPKMELLYVL 684
++IR ++QT F N V ++ + +GGID ++VW + +L Y +
Sbjct: 179 WDIRKKAAIQT-FQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTM 231
>AK222488-1|BAD96208.1| 317|Homo sapiens guanine nucleotide binding
protein (G protein), beta polypeptide 2-like 1 varia
protein.
Length = 317
Score = 29.9 bits (64), Expect = 9.6
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 586 VRISNNGKLMATGGIDTKVRVWTFPKMELLYVLE 687
V +S +G L A+GG D + +W F + + LY L+
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDFNEGKHLYTLD 231
>AK127882-1|BAC87175.1| 369|Homo sapiens protein ( Homo sapiens
cDNA FLJ45988 fis, clone PUAEN2006639, weakly similar
to Vegetatible incompatibility protein HET-E-1. ).
Length = 369
Score = 29.9 bits (64), Expect = 9.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 610 LMATGGIDTKVRVWTFPKMELLYVLEKPTKELDDLDF 720
L+ATG +DT ++W E +Y L + E+ L F
Sbjct: 191 LVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSF 227
>AK098821-1|BAC05425.1| 415|Homo sapiens protein ( Homo sapiens
cDNA FLJ25955 fis, clone TST03904. ).
Length = 415
Score = 29.9 bits (64), Expect = 9.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 610 LMATGGIDTKVRVWTFPKMELLYVLEKPTKELDDLDF 720
L+ATG +DT ++W E +Y L + E+ L F
Sbjct: 191 LVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSF 227
>AK097409-1|BAC05039.1| 415|Homo sapiens protein ( Homo sapiens
cDNA FLJ40090 fis, clone TESTI2003596, weakly similar to
VEGETATIBLE INCOMPATIBILITY PROTEIN HET-E-1. ).
Length = 415
Score = 29.9 bits (64), Expect = 9.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 610 LMATGGIDTKVRVWTFPKMELLYVLEKPTKELDDLDF 720
L+ATG +DT ++W E +Y L + E+ L F
Sbjct: 191 LVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSF 227
>AK000897-1|BAA91413.1| 309|Homo sapiens protein ( Homo sapiens
cDNA FLJ10035 fis, clone HEMBA1000919. ).
Length = 309
Score = 29.9 bits (64), Expect = 9.6
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +1
Query: 526 EIR-PCDSVQTDFSNDPLQRVVRISNNGKLMATGGIDTKVRVW 651
E+R P ++ ++D V+ S +L+ATGG+D +V++W
Sbjct: 211 EVRVPATALCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLW 253
>AF090988-1|AAC69625.1| 357|Homo sapiens U5 snRNP-specific 40 kDa
protein protein.
Length = 357
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +1
Query: 523 FEIRPCDSVQTDFSNDPLQRVVRISNNGKLMATGGIDTKVRVWTFPKMELLYVL 684
++IR ++QT F N V ++ + +GGID ++VW + +L Y +
Sbjct: 179 WDIRKKAAIQT-FQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTM 231
>AF001687-1|AAB87640.1| 521|Homo sapiens U4/U6 snRNP 60 kDa protein
protein.
Length = 521
Score = 29.9 bits (64), Expect = 9.6
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 586 VRISNNGKLMATGGIDTKVRVWTFPKMELLYVLEKPTKELDDLDF 720
+ +G L TGG+D RVW + LE KE+ ++F
Sbjct: 370 IAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEDHLKEIYGINF 414
>AC073065-2|AAX93215.1| 415|Homo sapiens unknown protein.
Length = 415
Score = 29.9 bits (64), Expect = 9.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 610 LMATGGIDTKVRVWTFPKMELLYVLEKPTKELDDLDF 720
L+ATG +DT ++W E +Y L + E+ L F
Sbjct: 191 LVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSF 227
>AC013726-3|AAY14860.1| 523|Homo sapiens unknown protein.
Length = 523
Score = 29.9 bits (64), Expect = 9.6
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +1
Query: 526 EIR-PCDSVQTDFSNDPLQRVVRISNNGKLMATGGIDTKVRVW 651
E+R P ++ ++D V+ S +L+ATGG+D +V++W
Sbjct: 223 EVRVPATALCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLW 265
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,471,140
Number of Sequences: 237096
Number of extensions: 2436877
Number of successful extensions: 10702
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 10106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10682
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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