Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1581X
(524 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50882| Best HMM Match : Metallophos (HMM E-Value=8.00001e-41) 187 6e-48
SB_49199| Best HMM Match : Metallophos (HMM E-Value=2.5e-25) 101 3e-22
SB_31501| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 8e-21
SB_38314| Best HMM Match : Metallophos (HMM E-Value=5.1e-07) 83 1e-16
SB_52368| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 3e-13
SB_56433| Best HMM Match : Metallophos (HMM E-Value=1.7e-15) 54 7e-08
SB_49265| Best HMM Match : efhand (HMM E-Value=0.68) 50 9e-07
SB_1044| Best HMM Match : Metallophos (HMM E-Value=5.8e-16) 44 8e-05
SB_38634| Best HMM Match : DUF164 (HMM E-Value=0.6) 28 4.1
SB_57048| Best HMM Match : S-antigen (HMM E-Value=3.4) 28 5.4
SB_9853| Best HMM Match : Lipase_3 (HMM E-Value=0.00075) 27 7.2
SB_42654| Best HMM Match : Tfb4 (HMM E-Value=0.0028) 27 9.5
SB_11828| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_1653| Best HMM Match : ABC_tran (HMM E-Value=0) 27 9.5
>SB_50882| Best HMM Match : Metallophos (HMM E-Value=8.00001e-41)
Length = 293
Score = 187 bits (455), Expect = 6e-48
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +1
Query: 256 LLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYK 435
LLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYK
Sbjct: 52 LLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYK 111
Query: 436 IKYPENFFLLRGNHECASINRIYG 507
IKYPENFFLLRGNHECASINRIYG
Sbjct: 112 IKYPENFFLLRGNHECASINRIYG 135
Score = 79.4 bits (187), Expect = 2e-15
Identities = 35/54 (64%), Positives = 46/54 (85%)
Frame = +2
Query: 110 DTDELNIDNVIKKLLKVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQPNYLNLK 271
+ ++LN+D++I +LL+VRG +PG NVQLTE EI+GLCLKSREIFLSQP L L+
Sbjct: 3 EPEKLNVDSIISRLLEVRGSRPGKNVQLTEAEIRGLCLKSREIFLSQPILLELE 56
>SB_49199| Best HMM Match : Metallophos (HMM E-Value=2.5e-25)
Length = 173
Score = 101 bits (243), Expect = 3e-22
Identities = 43/81 (53%), Positives = 57/81 (70%)
Frame = +1
Query: 265 LEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKY 444
+ +P+ +CGDIHGQ+YDL LF GG P ++Y+F+GD+VDRG SLET LL K K+
Sbjct: 42 VSSPVTVCGDIHGQFYDLEELFRTGGQVPNTSYVFMGDFVDRGYYSLETFTRLLTLKAKW 101
Query: 445 PENFFLLRGNHECASINRIYG 507
P+ LLRGNHE I ++YG
Sbjct: 102 PDRITLLRGNHESRQITQVYG 122
>SB_31501| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1150
Score = 97.1 bits (231), Expect = 8e-21
Identities = 45/83 (54%), Positives = 57/83 (68%)
Frame = +1
Query: 256 LLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYK 435
+LE++AP+ +CGDIHGQ+YDL++LFE GG P + YLFLGDYVDRG S+E CL
Sbjct: 76 MLEVDAPITVCGDIHGQFYDLVKLFEVGGSPATTRYLFLGDYVDRGYFSIE--CL----- 128
Query: 436 IKYPENFFLLRGNHECASINRIY 504
Y FLLRGNHEC + +
Sbjct: 129 --YTNTLFLLRGNHECRHLTEYF 149
>SB_38314| Best HMM Match : Metallophos (HMM E-Value=5.1e-07)
Length = 199
Score = 83.0 bits (196), Expect = 1e-16
Identities = 32/58 (55%), Positives = 46/58 (79%)
Frame = +1
Query: 262 ELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYK 435
E++ P+ +CGD+HGQ++DL+ LF GG P++NYLF+GDYVDRG S+ET+ LL+ K
Sbjct: 48 EVKCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVTLK 105
>SB_52368| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 72.1 bits (169), Expect = 3e-13
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Frame = +1
Query: 211 RAMFEIKRNI-LVTA*LLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVD 387
R + ++ R I L LLE+ AP+ I GDIHGQY DLLR F+ G+PP +Y+FLGDYVD
Sbjct: 38 RQICQVSREIFLQQPMLLEIGAPINIFGDIHGQYEDLLRHFDKLGYPPNESYIFLGDYVD 97
Query: 388 RGKQ 399
R K+
Sbjct: 98 RPKR 101
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/49 (48%), Positives = 34/49 (69%)
Frame = +2
Query: 122 LNIDNVIKKLLKVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQPNYLNL 268
L++DNVI++LL + + PG VQL E +I+ +C SREIFL QP L +
Sbjct: 10 LDVDNVIEQLLSYK-KNPGKQVQLPEAQIRQICQVSREIFLQQPMLLEI 57
>SB_56433| Best HMM Match : Metallophos (HMM E-Value=1.7e-15)
Length = 417
Score = 54.0 bits (124), Expect = 7e-08
Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +1
Query: 340 GFP-PESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 480
G P PE+ Y+F GD VDRG +S+E +L A+ I YP ++ RGNHE
Sbjct: 2 GLPSPENPYIFNGDLVDRGPRSIEICIILFAFTILYPNGVYINRGNHE 49
>SB_49265| Best HMM Match : efhand (HMM E-Value=0.68)
Length = 720
Score = 50.4 bits (115), Expect = 9e-07
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Frame = +1
Query: 256 LLELEAPLKICGDIHGQYYDLL----RLFEYGGFPPESNYLFLGDYVDRGKQSLE 408
+L +++P+ + GD+HG + DL+ L+ G SN+LFLGDYVDRG+ +E
Sbjct: 666 MLRVQSPVYVLGDLHGNFRDLVCFEKLLWRMGPVLTPSNFLFLGDYVDRGENGVE 720
>SB_1044| Best HMM Match : Metallophos (HMM E-Value=5.8e-16)
Length = 250
Score = 44.0 bits (99), Expect = 8e-05
Identities = 24/66 (36%), Positives = 34/66 (51%)
Frame = +1
Query: 283 ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 462
+ GDIHG L +LFE +FLGDYVD +S TI L+ +I +
Sbjct: 7 VFGDIHGGLRALQQLFERAEITINDKLIFLGDYVDGWSESAATIQFLI--EIAEKHDCIF 64
Query: 463 LRGNHE 480
++GNH+
Sbjct: 65 IKGNHD 70
>SB_38634| Best HMM Match : DUF164 (HMM E-Value=0.6)
Length = 493
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +1
Query: 385 DRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 486
D KQS T+C+LL Y+ KY E + + N EC+
Sbjct: 444 DTTKQSRRTVCMLL-YRAKYIEGCY-ISVNTECS 475
>SB_57048| Best HMM Match : S-antigen (HMM E-Value=3.4)
Length = 242
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 406 PTTACHGPHSLRGRDSWTPEGSHHTQTTLRGH 311
PT HGPH+ +WTP G HT T H
Sbjct: 202 PTRTPHGPHT---DPTWTPHGP-HTDPTRNPH 229
>SB_9853| Best HMM Match : Lipase_3 (HMM E-Value=0.00075)
Length = 593
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -1
Query: 188 EHSYQASHLVLLVIFLLRYRCLTHLCLCLPSDILYVYEI 72
E + ASHL+L VIFL + LT +C + ++ +E+
Sbjct: 49 ESLFTASHLILSVIFLFFF--LTAICFSITCNLDLAFEM 85
>SB_42654| Best HMM Match : Tfb4 (HMM E-Value=0.0028)
Length = 128
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -2
Query: 424 GAGILFPTTACHGPHSLRGRDSWTPEGSHHTQTTLR 317
G+ L+P +C G SL +DS + S T LR
Sbjct: 67 GSKFLYPKASCEGIQSLPSQDSKYEKFSEFNDTVLR 102
>SB_11828| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -1
Query: 515 IVTP*ILLMLAHSWFPRKRKKFSGYLI 435
IVTP L HS +PR RK+ SG I
Sbjct: 224 IVTPNTLADRKHSCYPRARKRGSGKFI 250
>SB_1653| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1702
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 256 LLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNY 363
L+E+ LK GD+ + R+ EY G PE Y
Sbjct: 1415 LIEVPYFLKAFGDVQSTMTSVQRILEYCGLKPELAY 1450
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,462,641
Number of Sequences: 59808
Number of extensions: 336973
Number of successful extensions: 1043
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1041
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1184975377
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -