Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1576
         (753 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    26   1.1  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   1.9  
DQ013849-1|AAY40258.1|  264|Anopheles gambiae CYP325C2 protein.        23   7.7  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          23   7.7  

>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +2

Query: 401 NVLYSCCSRSNRSTA*NKHAHCASLCSEGCL 493
           N +YSCC+   +    ++   C + C  GC+
Sbjct: 29  NEVYSCCAPCPQKACISEAVKCQTSCLPGCV 59


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 467  ASLCSEGCLKFRMYQRTVKRV 529
            A+LC+ G LK  +Y  T KRV
Sbjct: 1492 ATLCNNGLLKQNLYSPTGKRV 1512



 Score = 23.4 bits (48), Expect = 7.7
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -1

Query: 552 LIRFDFEGTRLTVLWYIRNLRQPSEHSDAQ 463
           L +FD++  R+  + Y   L    E+SD Q
Sbjct: 656 LFKFDYKDDRMWKIVYPNRLESMLEYSDVQ 685


>DQ013849-1|AAY40258.1|  264|Anopheles gambiae CYP325C2 protein.
          Length = 264

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 13/57 (22%), Positives = 25/57 (43%)
 Frame = +2

Query: 386 DLFIPNVLYSCCSRSNRSTA*NKHAHCASLCSEGCLKFRMYQRTVKRVPSKSNRIKV 556
           D+ + + +YS  +  N +TA      C  L     ++ R+Y+  +   P     I+V
Sbjct: 58  DIEVTHNIYSMIAAGNDTTALQVTHTCLFLAMHPAIQERVYREVMDVFPDPDQDIEV 114


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +2

Query: 74  YLSIDIFSRCLALLCAFIQLPN 139
           Y+  ++F+ CL+    F+Q PN
Sbjct: 379 YIGGEVFAECLSDSSIFVQSPN 400


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 755,691
Number of Sequences: 2352
Number of extensions: 15325
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)