BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1576 (753 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value DQ370045-1|ABD18606.1| 285|Anopheles gambiae putative TIL domai... 26 1.1 AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 25 1.9 DQ013849-1|AAY40258.1| 264|Anopheles gambiae CYP325C2 protein. 23 7.7 AY578801-1|AAT07306.1| 506|Anopheles gambiae dSmad2 protein. 23 7.7 >DQ370045-1|ABD18606.1| 285|Anopheles gambiae putative TIL domain protein protein. Length = 285 Score = 26.2 bits (55), Expect = 1.1 Identities = 9/31 (29%), Positives = 16/31 (51%) Frame = +2 Query: 401 NVLYSCCSRSNRSTA*NKHAHCASLCSEGCL 493 N +YSCC+ + ++ C + C GC+ Sbjct: 29 NEVYSCCAPCPQKACISEAVKCQTSCLPGCV 59 >AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. Length = 3398 Score = 25.4 bits (53), Expect = 1.9 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = +2 Query: 467 ASLCSEGCLKFRMYQRTVKRV 529 A+LC+ G LK +Y T KRV Sbjct: 1492 ATLCNNGLLKQNLYSPTGKRV 1512 Score = 23.4 bits (48), Expect = 7.7 Identities = 10/30 (33%), Positives = 16/30 (53%) Frame = -1 Query: 552 LIRFDFEGTRLTVLWYIRNLRQPSEHSDAQ 463 L +FD++ R+ + Y L E+SD Q Sbjct: 656 LFKFDYKDDRMWKIVYPNRLESMLEYSDVQ 685 >DQ013849-1|AAY40258.1| 264|Anopheles gambiae CYP325C2 protein. Length = 264 Score = 23.4 bits (48), Expect = 7.7 Identities = 13/57 (22%), Positives = 25/57 (43%) Frame = +2 Query: 386 DLFIPNVLYSCCSRSNRSTA*NKHAHCASLCSEGCLKFRMYQRTVKRVPSKSNRIKV 556 D+ + + +YS + N +TA C L ++ R+Y+ + P I+V Sbjct: 58 DIEVTHNIYSMIAAGNDTTALQVTHTCLFLAMHPAIQERVYREVMDVFPDPDQDIEV 114 >AY578801-1|AAT07306.1| 506|Anopheles gambiae dSmad2 protein. Length = 506 Score = 23.4 bits (48), Expect = 7.7 Identities = 8/22 (36%), Positives = 14/22 (63%) Frame = +2 Query: 74 YLSIDIFSRCLALLCAFIQLPN 139 Y+ ++F+ CL+ F+Q PN Sbjct: 379 YIGGEVFAECLSDSSIFVQSPN 400 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 755,691 Number of Sequences: 2352 Number of extensions: 15325 Number of successful extensions: 20 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 20 length of database: 563,979 effective HSP length: 63 effective length of database: 415,803 effective search space used: 77755161 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -