Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1574
(773 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 7.3
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 7.3
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 7.3
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 7.3
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 7.3
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 7.3
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 7.3
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 7.3
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 7.3
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 7.3
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 21 9.6
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 21 9.6
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 9.6
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.3
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 313 VYNENNRLSINITLKNNVGPYLKGAY 390
+ + NN LS N NN Y K Y
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY 106
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.3
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 313 VYNENNRLSINITLKNNVGPYLKGAY 390
+ + NN LS N NN Y K Y
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY 106
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.3
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 313 VYNENNRLSINITLKNNVGPYLKGAY 390
+ + NN LS N NN Y K Y
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY 106
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.3
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 313 VYNENNRLSINITLKNNVGPYLKGAY 390
+ + NN LS N NN Y K Y
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY 106
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.3
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 313 VYNENNRLSINITLKNNVGPYLKGAY 390
+ + NN LS N NN Y K Y
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY 106
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.3
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 313 VYNENNRLSINITLKNNVGPYLKGAY 390
+ + NN LS N NN Y K Y
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY 106
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.3
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 313 VYNENNRLSINITLKNNVGPYLKGAY 390
+ + NN LS N NN Y K Y
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY 106
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.3
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 313 VYNENNRLSINITLKNNVGPYLKGAY 390
+ + NN LS N NN Y K Y
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY 106
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 7.3
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 313 VYNENNRLSINITLKNNVGPYLKGAY 390
+ + NN LS N NN Y K Y
Sbjct: 314 IISNNNSLSNNYNYNNNYNNYNKHNY 339
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 7.3
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 313 VYNENNRLSINITLKNNVGPYLKGAY 390
+ + NN LS N NN Y K Y
Sbjct: 314 IISNNNSLSNNYNYNNNYNNYNKHNY 339
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.4 bits (43), Expect = 9.6
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 187 RGKNVIAFFLWTFKK 143
+ KNV+ FLW +K+
Sbjct: 73 KDKNVVQKFLWWYKQ 87
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.4 bits (43), Expect = 9.6
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 187 RGKNVIAFFLWTFKK 143
+ KNV+ FLW +K+
Sbjct: 73 KDKNVVQKFLWWYKQ 87
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.6
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 313 VYNENNRLSINITLKNNVGPYLKGAY 390
+ + NN LS N NN Y K Y
Sbjct: 81 IISNNNPLSNNYNYNNNYNNYNKHNY 106
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,545
Number of Sequences: 438
Number of extensions: 3871
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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