Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1572
         (703 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           25   0.79 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    24   1.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.2  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.7  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   9.7  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   9.7  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 11  HNTKGFNKENYFLLKNVNDKQN 76
           HN  G N  N++   N ND +N
Sbjct: 377 HNNNGNNSNNHWRKNNPNDNRN 398


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +1

Query: 376 LFFLALSKC*IYLSS*LDINENLIRSIIRWLSIFNLS 486
           LFF+ L     +L+  L  N    R + RW+ ++ LS
Sbjct: 138 LFFVILLWISFFLNFMLHCNNTTWRCLYRWIVLYTLS 174


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 78  MFCLSFTFFNKK*FSLLKPFVLCLFK 1
           M+CL F F+  +  SL +   +C FK
Sbjct: 132 MWCLIFAFWVPQLGSLFRSSRMCFFK 157


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 78  MFCLSFTFFNKK*FSLLKPFVLCLFK 1
           M+CL F F+  +  SL +   +C FK
Sbjct: 132 MWCLIFAFWVPQLGSLFRSSRMCFFK 157


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 78  MFCLSFTFFNKK*FSLLKPFVLCLFK 1
           M+CL F F+  +  SL +   +C FK
Sbjct: 132 MWCLIFAFWVPQLGSLFRSSRMCFFK 157


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 78  MFCLSFTFFNKK*FSLLKPFVLCLFK 1
           M+CL F F+  +  SL +   +C FK
Sbjct: 132 MWCLIFAFWVPQLGSLFRSSRMCFFK 157


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 638 YV*YCGFLHFATSSTFILYIY 700
           Y  YC F+ F     F+L IY
Sbjct: 147 YYFYCAFIIFTVHLLFLLCIY 167


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = +2

Query: 647 YCGFLHFATSSTFILYIYF 703
           YC F+     S F++ +Y+
Sbjct: 321 YCNFIILFYLSVFVILVYY 339


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -1

Query: 289 YMAFSGKCGYLPLVWV 242
           + AFS  C  + +VW+
Sbjct: 329 FWAFSNACEVMAIVWI 344


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -1

Query: 289 YMAFSGKCGYLPLVWV 242
           + AFS  C  + +VW+
Sbjct: 329 FWAFSNACEVMAIVWI 344


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,032
Number of Sequences: 336
Number of extensions: 3140
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)