Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1572
         (703 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC095544-1|AAH95544.1|  356|Homo sapiens G protein-coupled recep...    31   4.0  
BC067454-1|AAH67454.1|  356|Homo sapiens G protein-coupled recep...    31   4.0  
BC067453-1|AAH67453.1|  356|Homo sapiens G protein-coupled recep...    31   4.0  
AF045764-1|AAC39801.1|  356|Homo sapiens orphan G protein-couple...    31   4.0  

>BC095544-1|AAH95544.1|  356|Homo sapiens G protein-coupled receptor
           32 protein.
          Length = 356

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = +1

Query: 559 TQLHLIHVKLNLKKNLVHVNEVKLLFLCVVLWFSSFCDIFNIYII 693
           T  HLI  KL L++  VH N  K L L +V  F  F   FN+ ++
Sbjct: 234 TCAHLIRAKL-LREGWVHANRPKRLLLVLVSAFFIFWSPFNVVLL 277


>BC067454-1|AAH67454.1|  356|Homo sapiens G protein-coupled receptor
           32 protein.
          Length = 356

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = +1

Query: 559 TQLHLIHVKLNLKKNLVHVNEVKLLFLCVVLWFSSFCDIFNIYII 693
           T  HLI  KL L++  VH N  K L L +V  F  F   FN+ ++
Sbjct: 234 TCAHLIRAKL-LREGWVHANRPKRLLLVLVSAFFIFWSPFNVVLL 277


>BC067453-1|AAH67453.1|  356|Homo sapiens G protein-coupled receptor
           32 protein.
          Length = 356

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = +1

Query: 559 TQLHLIHVKLNLKKNLVHVNEVKLLFLCVVLWFSSFCDIFNIYII 693
           T  HLI  KL L++  VH N  K L L +V  F  F   FN+ ++
Sbjct: 234 TCAHLIRAKL-LREGWVHANRPKRLLLVLVSAFFIFWSPFNVVLL 277


>AF045764-1|AAC39801.1|  356|Homo sapiens orphan G protein-coupled
           receptor protein.
          Length = 356

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = +1

Query: 559 TQLHLIHVKLNLKKNLVHVNEVKLLFLCVVLWFSSFCDIFNIYII 693
           T  HLI  KL L++  VH N  K L L +V  F  F   FN+ ++
Sbjct: 234 TCAHLIRAKL-LREGWVHANRPKRLLLVLVSAFFIFWSPFNVVLL 277


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,265,907
Number of Sequences: 237096
Number of extensions: 1474285
Number of successful extensions: 1992
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1992
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)