Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1569
         (659 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   2.2  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   2.2  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   2.2  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   9.0  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.0  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   9.0  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   9.0  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -2

Query: 652 ISCLSRSFTKPLSVSP 605
           ISC+SRS +  LS+ P
Sbjct: 547 ISCVSRSVSMALSIGP 562


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -2

Query: 652 ISCLSRSFTKPLSVSP 605
           ISC+SRS +  LS+ P
Sbjct: 547 ISCVSRSVSMALSIGP 562


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +3

Query: 387 RHQRYAARISVYGEGSRRARR 449
           +HQ Y A + V   G RRA R
Sbjct: 26  QHQHYGAAVQVPQGGRRRAAR 46


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -1

Query: 434 RSFPINRYASSVPLMTP 384
           R FP +RY      MTP
Sbjct: 20  RQFPTDRYVGYYHFMTP 36


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -1

Query: 485 LANAVEAVFTMTPPCPPRSFPINRYASSVP 396
           + N    VFT+TP    R   IN +AS  P
Sbjct: 328 MTNTPLEVFTITPGRRYRFRMINSFASVCP 357


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -1

Query: 485 LANAVEAVFTMTPPCPPRSFPINRYASSVP 396
           + N    VFT+TP    R   IN +AS  P
Sbjct: 328 MTNTPLEVFTITPGRRYRFRMINSFASVCP 357


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 345 VHEASIINDNVNPVELLYCHHKCLF 271
           VHEASIIN      + +     C++
Sbjct: 163 VHEASIINFGYTLAKFMIFTSTCIY 187


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 277 AFVMTVEEFNRIDIVINNAGFMNDRLWE 360
           AFV  +++ N    ++ NA   N  LW+
Sbjct: 115 AFVFRLKQLNAKVEMLKNARVKNTALWK 142


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,226
Number of Sequences: 336
Number of extensions: 3268
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)