Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1569
(659 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32676| Best HMM Match : adh_short (HMM E-Value=1.2e-05) 65 4e-11
SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45) 46 3e-05
SB_21622| Best HMM Match : adh_short (HMM E-Value=3.1e-05) 46 4e-05
SB_14553| Best HMM Match : adh_short (HMM E-Value=4.2e-08) 46 4e-05
SB_35940| Best HMM Match : adh_short (HMM E-Value=0.00021) 46 4e-05
SB_47084| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_52724| Best HMM Match : adh_short (HMM E-Value=5.1e-08) 44 1e-04
SB_6722| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_8042| Best HMM Match : DUF803 (HMM E-Value=0) 42 3e-04
SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15) 42 6e-04
SB_16518| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_33638| Best HMM Match : adh_short (HMM E-Value=0.0014) 40 0.001
SB_5928| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32) 40 0.002
SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11) 40 0.002
SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34) 39 0.003
SB_19040| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33) 38 0.007
SB_32677| Best HMM Match : SapB_1 (HMM E-Value=4.1) 38 0.010
SB_14258| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.017
SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.022
SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07) 36 0.022
SB_20705| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.022
SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15) 35 0.051
SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23) 35 0.067
SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34) 33 0.21
SB_49030| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10) 33 0.27
SB_26979| Best HMM Match : THF_DHG_CYH_C (HMM E-Value=0.017) 31 0.83
SB_3125| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_10571| Best HMM Match : Cas1p (HMM E-Value=1.8e-26) 30 1.5
SB_44870| Best HMM Match : adh_short (HMM E-Value=5.4e-11) 29 2.5
SB_3684| Best HMM Match : fn3 (HMM E-Value=8e-11) 29 3.4
SB_52454| Best HMM Match : 3HCDH_N (HMM E-Value=1.3) 28 7.7
SB_34460| Best HMM Match : Borrelia_orfA (HMM E-Value=0.3) 28 7.7
SB_22316| Best HMM Match : fn3 (HMM E-Value=0.0034) 28 7.7
SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39) 28 7.7
>SB_32676| Best HMM Match : adh_short (HMM E-Value=1.2e-05)
Length = 201
Score = 65.3 bits (152), Expect = 4e-11
Identities = 43/94 (45%), Positives = 51/94 (54%), Gaps = 10/94 (10%)
Frame = +1
Query: 226 KRFVLSIRC--YDYPQFEEAFVMTVEEFNRIDIVINNAGFM---NDRL----WELEVDVN 378
K VL I+C PQ E AF T + F R+DI+ NNAG ND L W+ +D+N
Sbjct: 55 KHRVLFIKCDVTSQPQMEAAFQRTKDVFGRLDILCNNAGIAVRENDLLRSGAWKTIIDIN 114
Query: 379 LNGVIRGTLLAYRFMG-KDRGGQGGVIVNTASTA 477
+ GVI GTLL MG G GG IVN AS A
Sbjct: 115 VKGVILGTLLGLDHMGVSGAKGHGGTIVNVASLA 148
Score = 57.6 bits (133), Expect = 8e-09
Identities = 26/65 (40%), Positives = 40/65 (61%)
Frame = +2
Query: 59 MDLKGKVALITGAASGIGLAYSEELLKQGAKVSLCDIDSERGEQVTEKLASKYGRKNVLF 238
M ++G VA++TG GIGLA S+ LL + KV + DI+ + G + + L+ Y + VLF
Sbjct: 1 MKIEGTVAIVTGGVQGIGLAISKALLDRDGKVCMLDINEKTGNETLKLLSENYSKHRVLF 60
Query: 239 CRLDV 253
+ DV
Sbjct: 61 IKCDV 65
>SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 53.6 bits (123), Expect = 1e-07
Identities = 30/61 (49%), Positives = 40/61 (65%)
Frame = +2
Query: 71 GKVALITGAASGIGLAYSEELLKQGAKVSLCDIDSERGEQVTEKLASKYGRKNVLFCRLD 250
G+VA++TG ASGIG A E L ++GA V++ DI+ E G+QV L S G K V F +D
Sbjct: 24 GRVAIVTGGASGIGKATVERLAREGASVAILDINDELGQQVETDLRSS-GNK-VKFYHVD 81
Query: 251 V 253
V
Sbjct: 82 V 82
>SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45)
Length = 620
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +2
Query: 65 LKGKVALITGAASGIGLAYSEELLKQGAKVSLCDIDSERGEQVTEKLAS 211
L+G++AL+TG SGIG A E L +GA VS+ D+ ++ +E LA+
Sbjct: 191 LRGRLALVTGGGSGIGRAVCEALANRGASVSVIDLHGVGAKETSENLAT 239
>SB_21622| Best HMM Match : adh_short (HMM E-Value=3.1e-05)
Length = 493
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +2
Query: 83 LITGAASGIGLAYSEELLKQGAKVSLCDIDSERGEQVTEKLASKYGRKNVLFCRLDVMTI 262
+ITGA SGIG + L K GA V + D +RGEQ ++L + G +N+ LD+
Sbjct: 47 MITGANSGIGKETARALAKSGATVHMVCRDEQRGEQARQELLQESGNQNIYLHVLDMSQP 106
Query: 263 HNL 271
N+
Sbjct: 107 SNV 109
>SB_14553| Best HMM Match : adh_short (HMM E-Value=4.2e-08)
Length = 319
Score = 45.6 bits (103), Expect = 4e-05
Identities = 22/71 (30%), Positives = 41/71 (57%)
Frame = +2
Query: 65 LKGKVALITGAASGIGLAYSEELLKQGAKVSLCDIDSERGEQVTEKLASKYGRKNVLFCR 244
L GK +ITGA +GIG + +L K+GA+V + + +RG + S+ G + V
Sbjct: 35 LDGKTVIITGATTGIGKETAVDLAKRGARVIIGARNLDRGNTAVRDIQSRSGSQQVFVEH 94
Query: 245 LDVMTIHNLKR 277
LD+ ++ ++++
Sbjct: 95 LDLASLSSVRK 105
>SB_35940| Best HMM Match : adh_short (HMM E-Value=0.00021)
Length = 181
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +2
Query: 83 LITGAASGIGLAYSEELLKQGAKVSLCDIDSERGEQVTEKLASKYGRKNVLFCRLDVMTI 262
+ITGA SGIG + L K GA V + D +RGEQ ++L + G +N+ LD+
Sbjct: 47 MITGANSGIGKETARALAKSGATVHMVCRDEQRGEQARQELLQESGNQNIYLHVLDMSQP 106
Query: 263 HNL 271
N+
Sbjct: 107 SNV 109
>SB_47084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 355
Score = 44.4 bits (100), Expect = 8e-05
Identities = 23/71 (32%), Positives = 42/71 (59%)
Frame = +2
Query: 65 LKGKVALITGAASGIGLAYSEELLKQGAKVSLCDIDSERGEQVTEKLASKYGRKNVLFCR 244
L GK ++TGA SGIG A + EL ++GA+V + D E E+ ++ K + V+
Sbjct: 66 LHGKTVIVTGANSGIGKATALELARRGARVIMACRDLESAEKAASEIRYKVPKAEVVCRF 125
Query: 245 LDVMTIHNLKR 277
LD+ ++ ++++
Sbjct: 126 LDLNSLISVRK 136
>SB_52724| Best HMM Match : adh_short (HMM E-Value=5.1e-08)
Length = 316
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/71 (29%), Positives = 40/71 (56%)
Frame = +2
Query: 65 LKGKVALITGAASGIGLAYSEELLKQGAKVSLCDIDSERGEQVTEKLASKYGRKNVLFCR 244
L GK +ITGA +GIG + +L K+GA+V + + +RG + + G + V
Sbjct: 35 LDGKTVIITGATTGIGKETAVDLAKRGARVIIGARNLDRGNAAVRDIQASSGSQQVFVEH 94
Query: 245 LDVMTIHNLKR 277
LD+ ++ ++++
Sbjct: 95 LDLASLSSVRK 105
>SB_6722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Frame = +2
Query: 26 F*ARCFYSSINMD----LKGKVALITGAASGIGLAYSEELLKQGAKVSLCDIDSERGEQV 193
F + +YS N LKGK +ITGA SGIG+ + +L + A+V + D +G +
Sbjct: 53 FSIKIYYSGANCSSDEKLKGKTVIITGANSGIGMEVARDLAWRKARVIMACRDVHKGMKA 112
Query: 194 TEKLASKYGRKNVLFCRLDVMTIHNLK 274
++ G +V +LD+ + +++
Sbjct: 113 AAEIVQSAGNMDVEVKKLDLASFASIR 139
>SB_8042| Best HMM Match : DUF803 (HMM E-Value=0)
Length = 603
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/47 (42%), Positives = 33/47 (70%)
Frame = +2
Query: 65 LKGKVALITGAASGIGLAYSEELLKQGAKVSLCDIDSERGEQVTEKL 205
L+G+VA++TGA+SGIG A ++ L + G KV+L ER Q+ +++
Sbjct: 102 LEGQVAIVTGASSGIGAAVAKALAEAGVKVALAARREERLTQLRDEI 148
>SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15)
Length = 537
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/57 (35%), Positives = 33/57 (57%)
Frame = +2
Query: 41 FYSSINMDLKGKVALITGAASGIGLAYSEELLKQGAKVSLCDIDSERGEQVTEKLAS 211
++ + M L+ VALI G ASGIG A + L++ GA+ + D+ S G+ ++ S
Sbjct: 278 WFCFLTMLLEKVVALIAGGASGIGRATAIRLIRAGARAVIVDLPSSEGQNTAQEFGS 334
>SB_16518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 41.1 bits (92), Expect = 8e-04
Identities = 24/67 (35%), Positives = 38/67 (56%)
Frame = +2
Query: 62 DLKGKVALITGAASGIGLAYSEELLKQGAKVSLCDIDSERGEQVTEKLASKYGRKNVLFC 241
+L G+V ++TGA+SGIGLA + L GA V + D E+ + A + +K C
Sbjct: 90 NLDGRVVMVTGASSGIGLATASALAAHGAHVVMACRDMEKAHK-----AELHIKKTNKDC 144
Query: 242 RLDVMTI 262
+L+VM +
Sbjct: 145 KLEVMFV 151
>SB_33638| Best HMM Match : adh_short (HMM E-Value=0.0014)
Length = 268
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 65 LKGKVALITGAASGIGLAYSEELLKQGAKVSL-CDIDSERGEQVTEKLASKY 217
L + AL+TG GIGLA S +L K G + L + + ER E+ +L SKY
Sbjct: 79 LSNRYALVTGGTRGIGLAISHKLAKNGYYLILGYNANDERAEKAKSELESKY 130
>SB_5928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 609
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +1
Query: 265 QFEEAFVMTVEEFNRIDIVINNAGFMNDRLWELEVDVNL 381
Q ++AF TV +DIV NNAG +++ W +DVNL
Sbjct: 62 QLKDAFWETVSTHGHLDIVFNNAGILDEERWSKTLDVNL 100
>SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32)
Length = 728
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/47 (44%), Positives = 31/47 (65%)
Frame = +2
Query: 65 LKGKVALITGAASGIGLAYSEELLKQGAKVSLCDIDSERGEQVTEKL 205
L+G+ LITGAASGIG + L K+G K+ L DI+ E + V +++
Sbjct: 33 LRGETVLITGAASGIGRLTALILAKKGCKLVLWDINLEALKAVAQEI 79
>SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11)
Length = 305
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +2
Query: 74 KVALITGAASGIGLAYSEELLKQGAKVSLCDIDSERGEQVTEKLAS 211
++ LITGA SGIG + E K GAK+ DI+ + +Q E + S
Sbjct: 54 EIVLITGAGSGIGKGMAIEFAKIGAKIVCVDINKQANDQTVEVIKS 99
>SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34)
Length = 253
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 9/83 (10%)
Frame = +1
Query: 256 DYPQFEEAFVMTVEEFNRIDIVINNAGFMNDRL---------WELEVDVNLNGVIRGTLL 408
D Q + F + F R+D+++NNAG + ++ W+ N+ G
Sbjct: 68 DERQVMQLFARLDQHFGRLDVLVNNAGILETQMRLEQMELARWQRVFATNVFGSFLCCRE 127
Query: 409 AYRFMGKDRGGQGGVIVNTASTA 477
A + M +GG GG IVN +S A
Sbjct: 128 AIKRMSTRQGGNGGAIVNLSSAA 150
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +2
Query: 65 LKGKVALITGAASGIGLAYSEELLKQGAKVSLCDIDSERGEQVTEKLASK 214
L KV LITGA+ GIG A + QG +LC ++ +R + E L S+
Sbjct: 5 LMEKVMLITGASRGIGAATARLAAAQG--YALC-LNYQRQQAAAEALVSE 51
>SB_19040| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +2
Query: 62 DLKGKVALITGAASGIGLAYSEELLKQGAKVSLCDIDSERGEQ 190
+L G+V ++TGA+SGIGLA + L GA V + D E+ +
Sbjct: 42 NLDGRVVMVTGASSGIGLATASALAAHGAHVVMACRDMEKAHK 84
>SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33)
Length = 717
Score = 37.9 bits (84), Expect = 0.007
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Frame = +1
Query: 265 QFEEAFVMTVEEFNRIDIVINNAGFMNDRL--------WELEVDVNLNGVIRGTLLAYRF 420
Q ++ ++ F RID+V+NNAG + D+ W+L V+L G T A+
Sbjct: 79 QGDQVVETAIKAFGRIDVVVNNAGILRDKSILRMSELDWDLVQRVHLKGSFLVTRAAWPH 138
Query: 421 MGKDRGGQGGVIVNTASTA 477
M K + G+ I+ T ST+
Sbjct: 139 MKKQKFGR---IIMTTSTS 154
Score = 35.1 bits (77), Expect = 0.051
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +2
Query: 71 GKVALITGAASGIGLAYSEELLKQGAKVSLCDIDSE-RGEQVTEKLASK 214
G+V L+TGA +G+G Y+ ++GA V + D+ + +GE + + A K
Sbjct: 10 GRVVLVTGAGNGLGRQYALAFAERGASVVVNDLGGDTKGEGKSGRAADK 58
>SB_32677| Best HMM Match : SapB_1 (HMM E-Value=4.1)
Length = 256
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/39 (35%), Positives = 27/39 (69%)
Frame = +1
Query: 265 QFEEAFVMTVEEFNRIDIVINNAGFMNDRLWELEVDVNL 381
+ EA TV++ +++DI+ NNAG ++++ W V++NL
Sbjct: 104 KLSEAIRQTVKDHSKLDILCNNAGIIDEKNWPKSVELNL 142
>SB_14258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 36.7 bits (81), Expect = 0.017
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = +2
Query: 65 LKGKVALITGAASGIGLAYSEELLKQGAKVSLCDIDSERGEQVTEKLASKYGRKNVLFCR 244
++GKVA ITGA+SGIG + +L G K+ L + ++V K + N F
Sbjct: 49 MQGKVAWITGASSGIGEFLAYQLAGNGCKLVLSARRKQELDRVKRKCLEIAKKANPEFNE 108
Query: 245 LDVMTI 262
D+M +
Sbjct: 109 SDIMVL 114
>SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 36.3 bits (80), Expect = 0.022
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +2
Query: 50 SINMDLKGKVALITGAASGIGLAYSEELLKQGAKVSLCDIDSER 181
S+ LK KV +++ AA GIG A + ++GAKV DI++E+
Sbjct: 9 SLGDRLKNKVVVLSAAAQGIGKATALACAREGAKVIATDINAEK 52
Score = 31.1 bits (67), Expect = 0.83
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +1
Query: 274 EAFVMTVEEFNRIDIVINNAGFM--------NDRLWELEVDVNLNGVIRGTLLAYRFMGK 429
EA E +R+D++ N AG + +++ W+L +D+N+ + R + + K
Sbjct: 73 EAIKKFASEVDRVDVLFNCAGLVLGGNIEECSEKQWDLTMDLNVKSMFR---MTKECIPK 129
Query: 430 DRGGQGGVIVNTASTA 477
R G I+N AS A
Sbjct: 130 MRQQGSGSIINMASVA 145
>SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07)
Length = 384
Score = 36.3 bits (80), Expect = 0.022
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +2
Query: 71 GKVALITGAASGIGLAYSEELLKQGAKV 154
GKVA++TG +GIG A + ELL G+KV
Sbjct: 16 GKVAIVTGGGTGIGKAIAAELLSLGSKV 43
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 8/59 (13%)
Frame = +1
Query: 289 TVEEFNRIDIVINNAGF--------MNDRLWELEVDVNLNGVIRGTLLAYRFMGKDRGG 441
T+ + RID ++NN G M+ + W +D NLNG AYR + GG
Sbjct: 109 TLSSYGRIDYLVNNGGGQFLCPVSNMSYKGWNAVIDTNLNGTFLCCTEAYRLWMSEHGG 167
>SB_20705| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 976
Score = 36.3 bits (80), Expect = 0.022
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +2
Query: 41 FYSSINMD----LKGKVALITGAASGIGLAYSEELLKQGAKVSLCDIDSERGEQV 193
FY +D GKV ITGA+SGIG + E K G+K+ L +R EQV
Sbjct: 856 FYERFGVDPGSVFNGKVVWITGASSGIGEHLAYEFTKHGSKLVLSARREKRLEQV 910
>SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15)
Length = 355
Score = 35.1 bits (77), Expect = 0.051
Identities = 23/54 (42%), Positives = 29/54 (53%)
Frame = +2
Query: 41 FYSSINMDLKGKVALITGAASGIGLAYSEELLKQGAKVSLCDIDSERGEQVTEK 202
F SS L G+V ITGA+SGIG + EL K G K+ L E+V E+
Sbjct: 32 FGSSPKAKLYGRVCWITGASSGIGENLAYELAKFGCKLVLSARRRSELERVKEQ 85
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 235 VLSIRCYDYPQFEEAFVMTVEEFNRIDIVINNAG 336
VL + +Y + E ++ FN+IDI+INN+G
Sbjct: 105 VLPMDVTEYDKHTELVRSVLDHFNKIDILINNSG 138
>SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23)
Length = 228
Score = 34.7 bits (76), Expect = 0.067
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +2
Query: 71 GKVALITGAASGIGLAYSEELLKQGAKVSLCDIDSERGEQVTEKLASKYGRKNVLF 238
GK+ ITG ++G+GLA ++ QG V C + + ++ EK K G+ N +
Sbjct: 2 GKIVAITGVSTGLGLALTKWFSSQGHTVVGCGRSAAKIAEMNEKYCGK-GKPNQFY 56
Score = 32.7 bits (71), Expect = 0.27
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Frame = +1
Query: 193 NRKARFKIWPKKRFVLSIRCYDYPQFEEAFVMTVEEFNRIDIVINNAGFMNDR--LWEL- 363
N K K P + +V+ I D +E + F D V+NNAGF+N LWE+
Sbjct: 43 NEKYCGKGKPNQFYVVDIT--DDSVVKEWATNVCKSFGPPDFVLNNAGFVNQNAPLWEIT 100
Query: 364 --EVDVNLNGVIRGTLLAYR-FMGKDRGGQGGVIVNTAS 471
E D ++ ++G+ R F+ K GVIVN +S
Sbjct: 101 AEEFDKVVDVNLKGSANVIRSFLPKMIKAGKGVIVNFSS 139
>SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34)
Length = 527
Score = 33.1 bits (72), Expect = 0.21
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +2
Query: 74 KVALITGAASGIGLAYSEELLKQGAK 151
KVA+ITG +SGIGLA + L K G K
Sbjct: 4 KVAVITGCSSGIGLATASILAKDGEK 29
Score = 33.1 bits (72), Expect = 0.21
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = +1
Query: 271 EEAFVMTVEEFNRIDIVINNAGFMNDRLWELEV--------DVNLNGVIRGTLLAYRFMG 426
EEA EE RIDI++NNAG + + E + + N GV+R + M
Sbjct: 72 EEALNAIYEEEGRIDILVNNAGISHIGMLETQTQSLVKETFNTNFFGVLRMSKAVIPRMK 131
Query: 427 KDRGGQGGVIVNTASTA 477
D G I+N +STA
Sbjct: 132 SDHSGH---IINISSTA 145
>SB_49030| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 65 LKGKVALITGAASGIGLAYSEELLKQGAKVSLCDIDSERGEQVT 196
L GKVA +TG SGIG +E L++ ++++ R Q+T
Sbjct: 23 LAGKVAFVTGGGSGIGFTITEVLMR-SHQITIPHTPPPRSNQIT 65
>SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10)
Length = 289
Score = 32.7 bits (71), Expect = 0.27
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Frame = +1
Query: 262 PQFEEAFVMTVEEFNRIDIVINNAGFMNDR--------LWELEVDVNLNGVIRGTLLAYR 417
P+ A ++ RID+++NNAG M W V+++G + +A R
Sbjct: 101 PEGALALEKLIQRLGRIDVLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQIAAR 160
Query: 418 FMGKDRGGQGGVIVNTAS 471
M K GQGG I+N S
Sbjct: 161 QMVKQ--GQGGRIINITS 176
>SB_26979| Best HMM Match : THF_DHG_CYH_C (HMM E-Value=0.017)
Length = 453
Score = 31.1 bits (67), Expect = 0.83
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +2
Query: 65 LKGKVALITGAASGIGLAYSEELLKQGAKV 154
L GKV L+TGA+ GIG + L K GA V
Sbjct: 50 LSGKVCLVTGASRGIGKGIALMLGKAGATV 79
>SB_3125| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1268
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 65 LKGKVALITGAASGIGLAYSEELLKQGAKV 154
L GK ITGA+ GIG A + ++ + GA V
Sbjct: 3 LAGKTVFITGASRGIGKAIAVKVARDGANV 32
>SB_10571| Best HMM Match : Cas1p (HMM E-Value=1.8e-26)
Length = 765
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = -3
Query: 444 LPSAILPHKPICEQRTSDDAIQINIDFEFPKPVVHEASIINDNVNPVELLYCHHKCLFKL 265
L S I P P + + + + F H A ++ ++PV + H K LF L
Sbjct: 311 LASNISPFWPAISRPSGQQYLALLASNVFCATYGHTAPLVLCRISPVRPITIHQKALFCL 370
Query: 264 WIVITS 247
WI + +
Sbjct: 371 WITMAT 376
>SB_44870| Best HMM Match : adh_short (HMM E-Value=5.4e-11)
Length = 236
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = +2
Query: 74 KVALITGAASGIGLAYSEELLKQGAKVSLCDIDSERGEQVTEKLASKYGRKNVLFCRLDV 253
+V +ITG + G+GLA + G V C ++ E++ E+ AS G++ F +D+
Sbjct: 8 EVVVITGVSYGLGLAMVKWFNANGHTVIGCARSHDKIEKINEEFAS--GKEKRQFYVVDI 65
Query: 254 MTIHNLKR 277
+K+
Sbjct: 66 SNDEAVKQ 73
>SB_3684| Best HMM Match : fn3 (HMM E-Value=8e-11)
Length = 862
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +3
Query: 426 EGSRRARRCHREHGLYSICETSSVDSDLTATNYAIVGLTRAYGDQYHVNMTGLRCLVVCP 605
+G+ R + GL +S + T +Y ++GLT + ++ V++ + V
Sbjct: 85 QGAPADERYYLYMGLDGASPSSMPFASTTKLSYVVMGLTESVVYEFEVSLGTTKLSYVVT 144
Query: 606 GLTDS 620
GLTDS
Sbjct: 145 GLTDS 149
>SB_52454| Best HMM Match : 3HCDH_N (HMM E-Value=1.3)
Length = 114
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 68 KGKVALITGAASGIGLAYSEELLKQGAKVSLCDIDSER 181
+GK ++TG A G L ++GA+V+L DI R
Sbjct: 10 EGKKVVVTGGAGYFGSRLGYALSEKGAEVTLFDIREPR 47
>SB_34460| Best HMM Match : Borrelia_orfA (HMM E-Value=0.3)
Length = 1102
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = -1
Query: 644 LVKILHQTTVRESRAHDEASQSG 576
++ L+++T RES +H+EAS +G
Sbjct: 167 ILDTLYKSTTRESESHEEASHTG 189
>SB_22316| Best HMM Match : fn3 (HMM E-Value=0.0034)
Length = 3404
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +3
Query: 486 TSSVDSDLTATNYAIVGLTRAYGDQYHVNMTG 581
T V+ LT TNY I GL G YHV + G
Sbjct: 2047 TDFVNVGLT-TNYTITGLGLTNGHMYHVTVRG 2077
>SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39)
Length = 1750
Score = 27.9 bits (59), Expect = 7.7
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Frame = +1
Query: 298 EFNRIDIVINNAGFMNDRLWELEVDVNLNGVIRGTLLAY-----RFMGKDRGGQGGVIVN 462
E +DI++NNAG ++ + + D + I LLA+ F+G+ G IV
Sbjct: 1296 EVGDVDILVNNAGILHGKRLLDQTDAQIQKAIELNLLAHFWTSRSFLGRMLEQNQGHIVT 1355
Query: 463 TASTAFARP 489
+S + + P
Sbjct: 1356 ISSVSGSFP 1364
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,766,987
Number of Sequences: 59808
Number of extensions: 444913
Number of successful extensions: 1320
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1316
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1693527500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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