Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1567X
(394 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q47HT8 Cluster: Histidine kinase, HAMP region:Bacterial... 33 2.6
UniRef50_Q8D2T6 Cluster: B2817 protein; n=1; Wigglesworthia glos... 32 3.4
UniRef50_Q2YE87 Cluster: NBS-LRR type disease resistance protein... 32 3.4
UniRef50_A2Q529 Cluster: Leucine-rich repeat; n=1; Medicago trun... 31 6.0
UniRef50_Q7RQC0 Cluster: DOMINO B-related; n=5; Plasmodium (Vinc... 31 6.0
UniRef50_A4VE32 Cluster: Putative uncharacterized protein; n=2; ... 31 6.0
UniRef50_Q30P81 Cluster: Sensor protein; n=1; Thiomicrospira den... 31 7.9
UniRef50_A0DMM3 Cluster: Chromosome undetermined scaffold_562, w... 31 7.9
>UniRef50_Q47HT8 Cluster: Histidine kinase, HAMP region:Bacterial
chemotaxis sensory transducer precursor; n=1;
Dechloromonas aromatica RCB|Rep: Histidine kinase, HAMP
region:Bacterial chemotaxis sensory transducer precursor
- Dechloromonas aromatica (strain RCB)
Length = 680
Score = 32.7 bits (71), Expect = 2.6
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = +2
Query: 137 DGYLKESYFLRNIFVYLSTQ*FCLDLMTLVYLSTGIDIRILG 262
D YL+ES LRN+ + +S L L TLVYL +R LG
Sbjct: 315 DEYLEESRALRNLLIVISVA-AALVLATLVYLLVSFRLRSLG 355
>UniRef50_Q8D2T6 Cluster: B2817 protein; n=1; Wigglesworthia
glossinidia endosymbiont of Glossina brevipalpis|Rep:
B2817 protein - Wigglesworthia glossinidia brevipalpis
Length = 405
Score = 32.3 bits (70), Expect = 3.4
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = -3
Query: 263 RLIFLYQFQSINKLKSLSL-NKTIA*KGKRKYFLKNNFLSNTRLNQRHFRKFDRYSL 96
+++F+Y F IN S ++ N KY K NF+SN ++N +F +D Y L
Sbjct: 11 KIVFIYFFLIINYSCSSNIKNINDIFIENEKYTSKINFISNEKINYNYFILYDPYRL 67
>UniRef50_Q2YE87 Cluster: NBS-LRR type disease resistance protein
Rps1-k-2; n=5; Papilionoideae|Rep: NBS-LRR type disease
resistance protein Rps1-k-2 - Glycine max (Soybean)
Length = 1249
Score = 32.3 bits (70), Expect = 3.4
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +1
Query: 22 MPSINHKTYLSFFVNSRHKSNIVQPKLYLSNLRKCL*LRRV 144
M +NH +L FFV +H+ N ++ LSNLR L +R++
Sbjct: 661 MGKLNHLQHLDFFVVGKHEENGIKELGGLSNLRGQLEIRKL 701
>UniRef50_A2Q529 Cluster: Leucine-rich repeat; n=1; Medicago
truncatula|Rep: Leucine-rich repeat - Medicago
truncatula (Barrel medic)
Length = 588
Score = 31.5 bits (68), Expect = 6.0
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = +1
Query: 19 RMPSINHKTYLSFFVNSRHKSNIVQPKLYLSNLRKCL*LRRV 144
+M +NH +LS+FV +H+ ++ + LSNL L ++++
Sbjct: 41 KMRKLNHLQHLSYFVVDKHEEKGIKELITLSNLHGSLFIKKL 82
>UniRef50_Q7RQC0 Cluster: DOMINO B-related; n=5; Plasmodium
(Vinckeia)|Rep: DOMINO B-related - Plasmodium yoelii
yoelii
Length = 1732
Score = 31.5 bits (68), Expect = 6.0
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +1
Query: 58 FVNSRHKSNIVQPKLYLSNLRKCL*LRRVFER-KLFFKKYFRLPFYAI--VLFRLNDFSL 228
F+N++ N + Y+ + + LR+V LF KY + P+Y I + + + F L
Sbjct: 643 FINNKKVQNTLTSGNYMGLMNILIQLRKVCNHCDLFTNKYIQTPYYYILPIQYNIPKFCL 702
Query: 229 FIDWN*YKN 255
+ N YK+
Sbjct: 703 LFENNYYKD 711
>UniRef50_A4VE32 Cluster: Putative uncharacterized protein; n=2;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1108
Score = 31.5 bits (68), Expect = 6.0
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 46 YLSFFVNSRH-KSNIVQPKLYLSNLRKCL*LRRVFERKLFFKKYF 177
Y+ +F R+ KS+I ++L N+ +CL + FE+ F +YF
Sbjct: 1009 YIKYFQMIRNMKSDIEYVHIFLYNIAQCLFFNKQFEQSTFILQYF 1053
>UniRef50_Q30P81 Cluster: Sensor protein; n=1; Thiomicrospira
denitrificans ATCC 33889|Rep: Sensor protein -
Thiomicrospira denitrificans (strain ATCC 33889 / DSM
1351)
Length = 697
Score = 31.1 bits (67), Expect = 7.9
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = +1
Query: 58 FVNSRHKSNIVQPKLYLSNLRKCL*LRRVFERKLFFKKYFRLPFYAIVLFRLNDFSLFID 237
F+N + N VQ +YLS+ ++ L + R K+F + + Y+ + L +++ ID
Sbjct: 155 FMNDKESRNFVQALVYLSSAKESLGIIRATLNKVFIENKILIDDYSTIKGSLKNYNHNID 214
>UniRef50_A0DMM3 Cluster: Chromosome undetermined scaffold_562,
whole genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_562,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 404
Score = 31.1 bits (67), Expect = 7.9
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Frame = -3
Query: 239 QSINKLKSLSLNKTIA*KGKRKYFLKNNFLSNTRLNQRHF-RKFDRYSLGCTIFDL---- 75
Q + KL +K IA F NF++ + Q+ RK D +SLGCT+ +L
Sbjct: 221 QGVCKLADFGSSKKIALNSDSTIFGTPNFMAPEVVQQQKSGRKADIWSLGCTMIELATGK 280
Query: 74 --WRELT 60
W E+T
Sbjct: 281 PPWHEIT 287
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 339,281,302
Number of Sequences: 1657284
Number of extensions: 5777139
Number of successful extensions: 10978
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10976
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16080341554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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