Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1563
         (714 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000F1D503 Cluster: PREDICTED: similar to LOC553453 ...    34   3.0  
UniRef50_A5ZSG2 Cluster: Putative uncharacterized protein; n=1; ...    33   5.3  
UniRef50_Q54H31 Cluster: Putative uncharacterized protein; n=1; ...    33   5.3  
UniRef50_A6NI33 Cluster: Uncharacterized protein ENSP00000363870...    33   5.3  
UniRef50_Q8IJE8 Cluster: Putative uncharacterized protein; n=1; ...    33   7.0  
UniRef50_Q8EVS3 Cluster: Putative uncharacterized protein MYPE48...    33   9.2  

>UniRef50_UPI0000F1D503 Cluster: PREDICTED: similar to LOC553453
           protein; n=3; Danio rerio|Rep: PREDICTED: similar to
           LOC553453 protein - Danio rerio
          Length = 514

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +3

Query: 351 YLSLSCHNLLVHNSYITRNFLRFFPTCMQNGKRHTHF 461
           Y +  CH+L + NS+     L+F   C+ NG++H  F
Sbjct: 242 YFARDCHHLGIRNSFDHLRLLKFARVCVVNGRKHICF 278


>UniRef50_A5ZSG2 Cluster: Putative uncharacterized protein; n=1;
           Ruminococcus obeum ATCC 29174|Rep: Putative
           uncharacterized protein - Ruminococcus obeum ATCC 29174
          Length = 33

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -1

Query: 213 CLCQNCFICVAITEKKEDTNGLRIWSHHK 127
           C+ +N F+ V I+ KK++ NG+  W  H+
Sbjct: 2   CIVKNKFVIVTISTKKQNVNGVTRWKQHR 30


>UniRef50_Q54H31 Cluster: Putative uncharacterized protein; n=1;
            Dictyostelium discoideum AX4|Rep: Putative
            uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1563

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
 Frame = +3

Query: 198  NFDINNDVKTHLNTFTLTKIFIYTQIKDF-------KSINKILEYRF*NTADDRVNLFYL 356
            N D++ND++T  N+ T  K+F     +DF       KSI K L+ RF N  D+++N   L
Sbjct: 1341 NNDMSNDIQTWSNSLTNLKLFSSRPFEDFSNFISQLKSI-KNLDLRF-NADDNQINTILL 1398

Query: 357  SL 362
            SL
Sbjct: 1399 SL 1400


>UniRef50_A6NI33 Cluster: Uncharacterized protein ENSP00000363870;
           n=2; Homo sapiens|Rep: Uncharacterized protein
           ENSP00000363870 - Homo sapiens (Human)
          Length = 117

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 21/77 (27%), Positives = 36/77 (46%)
 Frame = +2

Query: 17  WGAVENKTKKFYLFIYLLSTSKAILE*FRNIALLQANLWCDHMRNPFVSSFFSVIATQIK 196
           +G  ENK    Y+F Y    S A+ + + +   L   +WC  ++   V +FF +I    K
Sbjct: 30  FGFEENKCSMSYMFEYPEYQSSAVPKTWVSTDHLSI-VWCKQLQLTTVRAFFDLIDADTK 88

Query: 197 QF*HKQRRKNTSKYFYF 247
           Q     ++K +  Y +F
Sbjct: 89  QITQNSKKKLSVLYHHF 105


>UniRef50_Q8IJE8 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 1309

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 22/71 (30%), Positives = 36/71 (50%)
 Frame = +3

Query: 204  DINNDVKTHLNTFTLTKIFIYTQIKDFKSINKILEYRF*NTADDRVNLFYLSLSCHNLLV 383
            +INN +K   NTFT+ ++  Y Q ++F  + KIL++   N       + Y   S  N+ +
Sbjct: 1176 NINNILKISSNTFTINELTKYIQ-ENFHLLQKILQH---NKISHIYEINYNVKSMKNIFI 1231

Query: 384  HNSYITRNFLR 416
             NS I   + R
Sbjct: 1232 SNSLIRNMYER 1242


>UniRef50_Q8EVS3 Cluster: Putative uncharacterized protein MYPE4860;
           n=1; Mycoplasma penetrans|Rep: Putative uncharacterized
           protein MYPE4860 - Mycoplasma penetrans
          Length = 192

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
 Frame = +3

Query: 201 FDINNDVKTHLNTFTLTKIFIYTQIKDFKSINKILEY--RF*NTADDRVNLFYLSLSCHN 374
           FD  N+++  L+       F Y ++ DF  IN    Y   F NT  D+  +  L+   + 
Sbjct: 104 FDFKNNLQIELSNNNSIFFFSYFELSDFLHINNFFSYFLDFDNTDADKKKIKRLAKEVNG 163

Query: 375 LLVHNSYITRNFL 413
           ++  +++ + NFL
Sbjct: 164 IVDEDNFESINFL 176


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,370,181
Number of Sequences: 1657284
Number of extensions: 10950101
Number of successful extensions: 25029
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25014
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57438021881
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)