Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1563
         (714 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    24   1.4  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   2.5  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   3.3  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   5.7  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   7.5  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/34 (26%), Positives = 20/34 (58%)
 Frame = -2

Query: 335 IISSILKSIFQNFIDRFKVFNLRINKYFRQSKSI 234
           ++ S++  + ++F  R+K  N ++     QSKS+
Sbjct: 184 LLISLINILIRSFKSRYKDLNQKLETACEQSKSV 217


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 632 IKEIYVCIYQILIKN 676
           I+ +Y+C Y +LI+N
Sbjct: 175 IEVLYICSYTVLIRN 189


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 298 KFWNIDFKILLMIESTCSIYLF 363
           KF++ID  +LL I    S YLF
Sbjct: 411 KFFSIDNALLLSICGASSSYLF 432


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 46  ILFIYLLIKHIKSNFRIIPE 105
           +L  YLL+KH K    ++P+
Sbjct: 31  VLNKYLLVKHSKPKMPLLPK 50


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +2

Query: 512 FLYSYKRKLICLLNTKRIVHFDNYAAVMTREICHVYFKY 628
           FL S K K+    NT  ++H   +   + R++  VYF +
Sbjct: 64  FLRSLK-KVHLQDNTIEMIHRGTFQGDIHRDLTEVYFSF 101


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,202
Number of Sequences: 336
Number of extensions: 3511
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)