Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1561
         (829 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001817-1|AAN71572.1|   69|Drosophila melanogaster RH39779p pro...    46   6e-05
AE014296-1585|AAF50318.1|   69|Drosophila melanogaster CG13315-P...    46   6e-05
BT011377-1|AAR96169.1|  958|Drosophila melanogaster LP10202p pro...    29   7.8  

>BT001817-1|AAN71572.1|   69|Drosophila melanogaster RH39779p
           protein.
          Length = 69

 Score = 46.0 bits (104), Expect = 6e-05
 Identities = 20/24 (83%), Positives = 22/24 (91%)
 Frame = +1

Query: 46  LIGSATRYIAGRHAVQTVYWRRSA 117
           LIG+ TRYIAGR+AVQTVYWR SA
Sbjct: 9   LIGATTRYIAGRNAVQTVYWRTSA 32


>AE014296-1585|AAF50318.1|   69|Drosophila melanogaster CG13315-PA
           protein.
          Length = 69

 Score = 46.0 bits (104), Expect = 6e-05
 Identities = 20/24 (83%), Positives = 22/24 (91%)
 Frame = +1

Query: 46  LIGSATRYIAGRHAVQTVYWRRSA 117
           LIG+ TRYIAGR+AVQTVYWR SA
Sbjct: 9   LIGATTRYIAGRNAVQTVYWRTSA 32


>BT011377-1|AAR96169.1|  958|Drosophila melanogaster LP10202p
           protein.
          Length = 958

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 23/68 (33%), Positives = 28/68 (41%)
 Frame = +2

Query: 50  LAALRDTSPAVTRSKRYTGADRRKTARAC*RPPKRPSSAKTRVQTKLTRPRCSQGSVKDT 229
           LA  R+  P + R KR        T+ A       PSS      + LTR R +  S K  
Sbjct: 129 LATRREWEPGI-RMKRKQSHKEPSTSSAA----AAPSSGAEASSSSLTRSRSNSHSGKKE 183

Query: 230 PKYSEPNN 253
           PK  E NN
Sbjct: 184 PKSGENNN 191


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,391,721
Number of Sequences: 53049
Number of extensions: 725398
Number of successful extensions: 1791
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1791
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3921660132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)