Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1558X
(478 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p... 56 1e-08
AL023839-2|CAA19508.1| 1066|Caenorhabditis elegans Hypothetical ... 42 2e-04
Z54284-4|CAA91061.1| 1001|Caenorhabditis elegans Hypothetical pr... 39 0.002
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 38 0.005
Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p... 37 0.007
Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr... 37 0.007
AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain pro... 37 0.009
AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain pro... 37 0.009
AB006659-1|BAA21847.1| 655|Caenorhabditis elegans E6-AP ubiquit... 36 0.011
AC084161-4|AAK29730.3| 724|Caenorhabditis elegans Hypothetical ... 36 0.015
AC025721-10|AAK29908.2| 1019|Caenorhabditis elegans Hypothetical... 34 0.061
AC024805-6|AAK39340.1| 448|Caenorhabditis elegans Hypothetical ... 32 0.24
AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical ... 31 0.57
Z46793-4|CAA86773.1| 889|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z34800-5|CAA84325.1| 889|Caenorhabditis elegans Hypothetical pr... 29 1.7
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 28 4.0
AC024204-2|ABA00163.1| 272|Caenorhabditis elegans Hypothetical ... 27 5.3
Z75714-6|CAE54930.1| 532|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z75714-5|CAB00065.2| 581|Caenorhabditis elegans Hypothetical pr... 27 7.0
U97406-4|AAC24295.1| 258|Caenorhabditis elegans Hypothetical pr... 27 7.0
>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
protein C34D4.14 protein.
Length = 2761
Score = 56.4 bits (130), Expect = 1e-08
Identities = 27/75 (36%), Positives = 38/75 (50%)
Frame = +2
Query: 17 SGGRDQRWDPRMLAECIRPDHGYNAESRAIRMLIDILASYNREEQRHFLQFVTGSPRLPT 196
SG + W + P GY ES +D++ + +E+++FLQF TG LP
Sbjct: 2642 SGEQCPEWSRDDILNYTEPKLGYTRESPGFLRFVDVMEALTAQERKNFLQFATGCSSLPP 2701
Query: 197 GGFKALTPPLTVVRK 241
GG L P LT+VRK
Sbjct: 2702 GGLANLHPRLTIVRK 2716
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +1
Query: 265 DEYLPSVMTCVNYLKLPDYSSAEVMXAKLRLAASEGQHSFHLS 393
D PSV TCV+YLKLP+YSS+ ++ +L A +E FHL+
Sbjct: 2721 DGSYPSVNTCVHYLKLPEYSSSAILRERLLTAINE--KGFHLN 2761
>AL023839-2|CAA19508.1| 1066|Caenorhabditis elegans Hypothetical
protein Y39A1C.2 protein.
Length = 1066
Score = 41.9 bits (94), Expect = 2e-04
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +2
Query: 80 GYNAESRAIRMLIDILAS-YNREEQRHFLQFVTGSPRLPTGGFKALTPPLTV 232
G++ R I+ L DIL + + EE++ FL+FVT R P GF L PP ++
Sbjct: 943 GFHGNHRLIKWLWDILENKFTSEERKLFLKFVTSCSRPPVLGFSYLEPPFSI 994
Score = 36.3 bits (80), Expect = 0.011
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +1
Query: 274 LPSVMTCVNYLKLPDYSSAEVMXAKLRLAASEGQHSFHLS 393
LP+ TC N LKLP+Y+ ++ KLR A G F LS
Sbjct: 1028 LPTASTCFNLLKLPNYNKKSLLLEKLRYAIHAGT-GFELS 1066
>Z54284-4|CAA91061.1| 1001|Caenorhabditis elegans Hypothetical protein
D2085.4 protein.
Length = 1001
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = +1
Query: 247 GVLLDP--DEYLPSVMTCVNYLKLPDYSSAEVMXAKLRLAASEG 372
GVL+ P D+ LP+ TC+N L++P YS+ + KLR A + G
Sbjct: 952 GVLVIPSSDDELPTSATCMNMLRIPKYSNRTKLEEKLRYAINSG 995
Score = 35.9 bits (79), Expect = 0.015
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +2
Query: 110 MLIDILASYNREEQRHFLQFVTGSPRLPTGGFKALTPPLTVV 235
M D++ + ++++ L+FVTG R P GFK++ P + V+
Sbjct: 913 MFWDVIDKLSNDDKKALLKFVTGCSRAPVDGFKSIQPRMGVL 954
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
mutant phenotypeprotein 1 protein.
Length = 4177
Score = 37.5 bits (83), Expect = 0.005
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +2
Query: 80 GYNAESRAIRMLIDILASYNREEQRHFLQFVTGSPRLPTGGFKAL 214
G+ S I+ L S+ +E++ FLQFVTG+ ++P GF +L
Sbjct: 4073 GFQKTSTHIQWFWRALRSFEKEDKAKFLQFVTGTSKVPLQGFASL 4117
Score = 31.9 bits (69), Expect = 0.24
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +1
Query: 274 LPSVMTCVNYLKLPDYSSAEVMXAKLRLAASEGQHSF 384
LP+ TC N L LP Y S E + L LA E F
Sbjct: 4138 LPAAHTCFNQLDLPQYESYEKLRQSLLLAIRECTEGF 4174
>Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 37.1 bits (82), Expect = 0.007
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 244 AGVLLDPDE--YLPSVMTCVNYLKLPDYSSAEVMXAKLRLAASEGQHSF 384
A V+L P E +LP+ TC++ L +P YSS V+ KL LA F
Sbjct: 2895 ASVMLRPQEDVFLPTANTCISRLYVPVYSSKRVLRTKLLLAIKAKNFGF 2943
>Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical protein
F36A2.13 protein.
Length = 2944
Score = 37.1 bits (82), Expect = 0.007
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 244 AGVLLDPDE--YLPSVMTCVNYLKLPDYSSAEVMXAKLRLAASEGQHSF 384
A V+L P E +LP+ TC++ L +P YSS V+ KL LA F
Sbjct: 2895 ASVMLRPQEDVFLPTANTCISRLYVPVYSSKRVLRTKLLLAIKAKNFGF 2943
>AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform b
protein.
Length = 792
Score = 36.7 bits (81), Expect = 0.009
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Frame = +2
Query: 83 YNAESRAIRMLIDILASYNREEQRHFLQFVTGSPRLPTGGFKALT----PPLTVVRKSLE 250
Y +S+ + + S ++E++ LQFVTG+ R+P GGF L P L + + +
Sbjct: 691 YAPQSKQVTWFWQWVRSLDQEKRARLLQFVTGTCRVPVGGFSELMGSTGPQLFCIERVGK 750
Query: 251 SYWI-RMNIC 277
W+ R + C
Sbjct: 751 ENWLPRSHTC 760
Score = 29.1 bits (62), Expect = 1.7
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 265 DEYLPSVMTCVNYLKLPDYSSAEVMXAKLRLA 360
+ +LP TC N L LP Y S + + KL +A
Sbjct: 751 ENWLPRSHTCFNRLDLPPYRSYDQLVEKLSMA 782
>AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform a
protein.
Length = 794
Score = 36.7 bits (81), Expect = 0.009
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Frame = +2
Query: 83 YNAESRAIRMLIDILASYNREEQRHFLQFVTGSPRLPTGGFKALT----PPLTVVRKSLE 250
Y +S+ + + S ++E++ LQFVTG+ R+P GGF L P L + + +
Sbjct: 693 YAPQSKQVTWFWQWVRSLDQEKRARLLQFVTGTCRVPVGGFSELMGSTGPQLFCIERVGK 752
Query: 251 SYWI-RMNIC 277
W+ R + C
Sbjct: 753 ENWLPRSHTC 762
Score = 29.1 bits (62), Expect = 1.7
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 265 DEYLPSVMTCVNYLKLPDYSSAEVMXAKLRLA 360
+ +LP TC N L LP Y S + + KL +A
Sbjct: 753 ENWLPRSHTCFNRLDLPPYRSYDQLVEKLSMA 784
>AB006659-1|BAA21847.1| 655|Caenorhabditis elegans E6-AP
ubiquitin-protein ligase protein.
Length = 655
Score = 36.3 bits (80), Expect = 0.011
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +1
Query: 274 LPSVMTCVNYLKLPDYSSAEVMXAKLRLAASEGQHSFHLS 393
LP+ TC N LKLP+Y+ ++ KLR A G F LS
Sbjct: 617 LPTASTCFNLLKLPNYNKKSLLLEKLRYAIHAGT-GFELS 655
Score = 33.1 bits (72), Expect = 0.11
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +2
Query: 116 IDILASYNREEQRHFLQFVTGSPRLPTGGFKALTPPLTV 232
I + S EE++ FL+FVT R P GF L PP ++
Sbjct: 545 IFLRTSSTSEERKLFLKFVTSCSRPPVLGFSYLEPPFSI 583
>AC084161-4|AAK29730.3| 724|Caenorhabditis elegans Hypothetical
protein Y92H12A.2 protein.
Length = 724
Score = 35.9 bits (79), Expect = 0.015
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 80 GYNAESRAIRMLIDILASYNREEQRHFLQFVTGSPRLPTGGFKAL 214
GY S+ + + S++ E + LQFV+G+ R+P GF+ L
Sbjct: 621 GYGPSSQVVHNFWKCILSFDNEMRARVLQFVSGTSRVPMNGFREL 665
Score = 28.3 bits (60), Expect = 3.0
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 268 EYLPSVMTCVNYLKLPDYSSAEVMXAKLRLAASEGQHSF 384
+ LP TC N L LP Y++ + + +KL L A E F
Sbjct: 683 DMLPRAHTCFNRLDLPPYTTFKELKSKL-LTAIENSEIF 720
>AC025721-10|AAK29908.2| 1019|Caenorhabditis elegans Hypothetical
protein Y48G8AL.1 protein.
Length = 1019
Score = 33.9 bits (74), Expect = 0.061
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 83 YNAESRAIRMLIDILASYNREEQRHFLQFVTGSPRLPTGGFKAL 214
Y++ I+ + +E+R FLQF+TGS R+P G++ L
Sbjct: 926 YSSSHPTIQAFWKAFFALTDDERRKFLQFLTGSTRIPVSGWEEL 969
>AC024805-6|AAK39340.1| 448|Caenorhabditis elegans Hypothetical
protein Y51H7C.9 protein.
Length = 448
Score = 31.9 bits (69), Expect = 0.24
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = -2
Query: 183 GLPVTNCKKCRCSSRLYEAKISISMRIARDSALY 82
G+ T+C+K RC S+L++ I + M + +D+ +
Sbjct: 54 GIVRTDCRKSRCLSKLFDMNIYLKMEVNQDTGSF 87
>AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical
protein Y32F6A.4 protein.
Length = 519
Score = 30.7 bits (66), Expect = 0.57
Identities = 22/77 (28%), Positives = 32/77 (41%)
Frame = +1
Query: 151 TTLLTVCYWKSKAANWWIQGIDSTTNCGA*IAGVLLDPDEYLPSVMTCVNYLKLPDYSSA 330
T LL +C+ KS WW I T A I ++ +Y C + KLP + +
Sbjct: 190 TCLLPLCFLKSPQDFWWAVVIAMMTTSAAVILIIVGSIIDY----GKCAPFAKLPPFRTT 245
Query: 331 EVMXAKLRLAASEGQHS 381
+ + L S G HS
Sbjct: 246 NLFLSMGTLLFSVGGHS 262
>Z46793-4|CAA86773.1| 889|Caenorhabditis elegans Hypothetical
protein F45H7.6 protein.
Length = 889
Score = 29.1 bits (62), Expect = 1.7
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 80 GYNAESRAIRMLIDILASYNREEQRHFLQFVTGSPRLPTGGFKAL 214
GY+ + +++ + +E+ L FVTGS +P GF AL
Sbjct: 787 GYSDCHIVVEWFWEVIETMTNQERFDLLLFVTGSSSVPFEGFSAL 831
Score = 29.1 bits (62), Expect = 1.7
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 277 PSVMTCVNYLKLPDYSSAEVMXAKLRLAASEG 372
P TC N L+LP Y++ + + +KL+ A G
Sbjct: 852 PRAHTCFNRLQLPSYNTKQQLKSKLQQAIVNG 883
>Z34800-5|CAA84325.1| 889|Caenorhabditis elegans Hypothetical
protein F45H7.6 protein.
Length = 889
Score = 29.1 bits (62), Expect = 1.7
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 80 GYNAESRAIRMLIDILASYNREEQRHFLQFVTGSPRLPTGGFKAL 214
GY+ + +++ + +E+ L FVTGS +P GF AL
Sbjct: 787 GYSDCHIVVEWFWEVIETMTNQERFDLLLFVTGSSSVPFEGFSAL 831
Score = 29.1 bits (62), Expect = 1.7
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 277 PSVMTCVNYLKLPDYSSAEVMXAKLRLAASEG 372
P TC N L+LP Y++ + + +KL+ A G
Sbjct: 852 PRAHTCFNRLQLPSYNTKQQLKSKLQQAIVNG 883
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 27.9 bits (59), Expect = 4.0
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = -2
Query: 462 HSHVDTKGAIYVITVKEETWSQL*KVERML 373
H +VD +G+IY+ +++E WS ++++L
Sbjct: 112 HPNVDLRGSIYLKMLEQEHWSSETSLKKLL 141
>AC024204-2|ABA00163.1| 272|Caenorhabditis elegans Hypothetical
protein Y73B6A.6 protein.
Length = 272
Score = 27.5 bits (58), Expect = 5.3
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -2
Query: 189 SLGLPVTNCKKCRCSSRLYEAKISISMRIARDSALYP*SGRIHS-ASIRGSHRWSR 25
+L LP+ C + C S K+ S +I RDS L+ + +S +SI G H +R
Sbjct: 163 NLPLPI-RCHRHECKSDKRPLKLQFSSKIDRDSYLHGFNRAKNSDSSILGKHPMAR 217
>Z75714-6|CAE54930.1| 532|Caenorhabditis elegans Hypothetical
protein ZC434.9b protein.
Length = 532
Score = 27.1 bits (57), Expect = 7.0
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +3
Query: 126 WLRTTVKNNDTSYSLLLEVQGCQLVDSRH 212
WL + +KN++ SY +++E G +++ H
Sbjct: 84 WLDSVLKNSNISYDVIIEDVGKLILEKEH 112
>Z75714-5|CAB00065.2| 581|Caenorhabditis elegans Hypothetical
protein ZC434.9a protein.
Length = 581
Score = 27.1 bits (57), Expect = 7.0
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +3
Query: 126 WLRTTVKNNDTSYSLLLEVQGCQLVDSRH 212
WL + +KN++ SY +++E G +++ H
Sbjct: 84 WLDSVLKNSNISYDVIIEDVGKLILEKEH 112
>U97406-4|AAC24295.1| 258|Caenorhabditis elegans Hypothetical
protein F40E3.6 protein.
Length = 258
Score = 27.1 bits (57), Expect = 7.0
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -1
Query: 184 WTSSNKL*EVSLFFTVVRSQNINKHAYSPR-FCIVSMIRTNTFRQHT 47
W S N F++ R QNI K+A +P+ C VS++ ++ T
Sbjct: 172 WQSYNSCSRCLNKFSIKRLQNILKNATTPKGRCSVSLVESDVLSSRT 218
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,534,219
Number of Sequences: 27780
Number of extensions: 227609
Number of successful extensions: 652
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 651
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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