Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1556X
         (384 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    25   0.34 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    24   0.45 
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    22   1.8  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    22   2.4  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    22   2.4  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    22   2.4  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    22   2.4  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    22   2.4  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   4.2  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    21   4.2  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   5.6  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   5.6  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   5.6  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   5.6  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   5.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   5.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   5.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    20   9.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    20   9.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    20   9.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    20   9.7  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    20   9.7  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 24.6 bits (51), Expect = 0.34
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = +2

Query: 59  SSNAFRFEARGSRCNYTETLELLSQGGW 142
           + N+ ++        Y E +EL  +GGW
Sbjct: 284 AGNSGKYTGEAGMLGYNEIVELQKEGGW 311


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 24.2 bits (50), Expect = 0.45
 Identities = 8/38 (21%), Positives = 20/38 (52%)
 Frame = +3

Query: 258 VFVCFGTA*RRRIGLRNKLRVLCTYCRTCLIRIFFSYL 371
           +F+C+ T   +  G   +     T+  +CL+ +++ +L
Sbjct: 147 MFLCYSTYGIQVFGTMQRTSFFKTFLNSCLMDVYYEFL 184


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -3

Query: 253 YQMPLSLFFTAYMGGRADSSSGIKWLLEPIDIHNI 149
           Y +PL LF   + G   D++       + ID+ N+
Sbjct: 4   YLIPLYLFLFVHYGWSEDTTHKYTTKYDNIDLENV 38


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 73  KRITATRQK*AGWWYLP 23
           ++I  T  +   WWYLP
Sbjct: 264 RQIALTVPRYQAWWYLP 280


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 73  KRITATRQK*AGWWYLP 23
           ++I  T  +   WWYLP
Sbjct: 264 RQIALTVPRYQAWWYLP 280


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 73  KRITATRQK*AGWWYLP 23
           ++I  T  +   WWYLP
Sbjct: 264 RQIALTVPRYQAWWYLP 280


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 73  KRITATRQK*AGWWYLP 23
           ++I  T  +   WWYLP
Sbjct: 264 RQIALTVPRYQAWWYLP 280


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 73  KRITATRQK*AGWWYLP 23
           ++I  T  +   WWYLP
Sbjct: 264 RQIALTVPRYQAWWYLP 280


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = +2

Query: 65  NAFRFEARGSRCNYTETLELLSQGGW 142
           +A R+        Y E +E  + GGW
Sbjct: 290 DAGRYTGERGMMGYNEIVEAQNAGGW 315


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
          transcription factor protein.
          Length = 193

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +2

Query: 5  PLVSPHG*VPPP 40
          P V PH  VPPP
Sbjct: 12 PTVLPHQEVPPP 23


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +3

Query: 228 KKRDNGIWY 254
           +K D+GIWY
Sbjct: 23  RKSDSGIWY 31


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +3

Query: 27  RYHHPAYFCRVAV 65
           +Y++  YFCR+ V
Sbjct: 328 KYYNILYFCRIMV 340


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -3

Query: 190 GIKWLLEPIDIHNINAPPT 134
           G  W L+    H++ AP T
Sbjct: 250 GHSWYLQSTSNHDVGAPAT 268


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -2

Query: 197 LIWYKVVTGAHRHPQHKCTTHL 132
           ++WY++   A  H   K T H+
Sbjct: 199 MVWYQMFEYAVGHWMQKATEHV 220


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -2

Query: 197 LIWYKVVTGAHRHPQHKCTTHL 132
           ++WY++   A  H   K T H+
Sbjct: 513 MVWYQMFEYAVGHWMQKATEHV 534


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -2

Query: 197 LIWYKVVTGAHRHPQHKCTTHL 132
           ++WY++   A  H   K T H+
Sbjct: 746 MVWYQMFEYAVGHWMQKATEHV 767


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -2

Query: 197 LIWYKVVTGAHRHPQHKCTTHL 132
           ++WY++   A  H   K T H+
Sbjct: 746 MVWYQMFEYAVGHWMQKATEHV 767


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -2

Query: 197 LIWYKVVTGAHRHPQHKCTTHL 132
           ++WY++   A  H   K T H+
Sbjct: 773 MVWYQMFEYAIGHWLQKATEHV 794


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -2

Query: 197 LIWYKVVTGAHRHPQHKCTTHL 132
           ++WY++   A  H   K T H+
Sbjct: 773 MVWYQMFEYAIGHWLQKATEHV 794


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -2

Query: 197 LIWYKVVTGAHRHPQHKCTTHL 132
           ++WY++   A  H   K T H+
Sbjct: 773 MVWYQMFEYAIGHWLQKATEHV 794


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -2

Query: 197 LIWYKVVTGAHRHPQHKCTTHL 132
           ++WY++   A  H   K T H+
Sbjct: 773 MVWYQMFEYAIGHWLQKATEHV 794


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 278 SAKTYKYLIPNAIISFFYCLY 216
           S K +KYL      + F CL+
Sbjct: 16  SMKNFKYLKVLVTFAHFICLF 36


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,772
Number of Sequences: 336
Number of extensions: 2126
Number of successful extensions: 22
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8014124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)